Literature DB >> 30998808

Use of Crowd Innovation to Develop an Artificial Intelligence-Based Solution for Radiation Therapy Targeting.

Raymond H Mak1, Michael G Endres2,3, Jin H Paik2,4, Rinat A Sergeev2,4, Hugo Aerts1,5, Christopher L Williams1, Karim R Lakhani2,4,6, Eva C Guinan1,2.   

Abstract

IMPORTANCE: Radiation therapy (RT) is a critical cancer treatment, but the existing radiation oncologist work force does not meet growing global demand. One key physician task in RT planning involves tumor segmentation for targeting, which requires substantial training and is subject to significant interobserver variation.
OBJECTIVE: To determine whether crowd innovation could be used to rapidly produce artificial intelligence (AI) solutions that replicate the accuracy of an expert radiation oncologist in segmenting lung tumors for RT targeting. DESIGN, SETTING, AND PARTICIPANTS: We conducted a 10-week, prize-based, online, 3-phase challenge (prizes totaled $55 000). A well-curated data set, including computed tomographic (CT) scans and lung tumor segmentations generated by an expert for clinical care, was used for the contest (CT scans from 461 patients; median 157 images per scan; 77 942 images in total; 8144 images with tumor present). Contestants were provided a training set of 229 CT scans with accompanying expert contours to develop their algorithms and given feedback on their performance throughout the contest, including from the expert clinician. MAIN OUTCOMES AND MEASURES: The AI algorithms generated by contestants were automatically scored on an independent data set that was withheld from contestants, and performance ranked using quantitative metrics that evaluated overlap of each algorithm's automated segmentations with the expert's segmentations. Performance was further benchmarked against human expert interobserver and intraobserver variation.
RESULTS: A total of 564 contestants from 62 countries registered for this challenge, and 34 (6%) submitted algorithms. The automated segmentations produced by the top 5 AI algorithms, when combined using an ensemble model, had an accuracy (Dice coefficient = 0.79) that was within the benchmark of mean interobserver variation measured between 6 human experts. For phase 1, the top 7 algorithms had average custom segmentation scores (S scores) on the holdout data set ranging from 0.15 to 0.38, and suboptimal performance using relative measures of error. The average S scores for phase 2 increased to 0.53 to 0.57, with a similar improvement in other performance metrics. In phase 3, performance of the top algorithm increased by an additional 9%. Combining the top 5 algorithms from phase 2 and phase 3 using an ensemble model, yielded an additional 9% to 12% improvement in performance with a final S score reaching 0.68. CONCLUSIONS AND RELEVANCE: A combined crowd innovation and AI approach rapidly produced automated algorithms that replicated the skills of a highly trained physician for a critical task in radiation therapy. These AI algorithms could improve cancer care globally by transferring the skills of expert clinicians to under-resourced health care settings.

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Year:  2019        PMID: 30998808      PMCID: PMC6512265          DOI: 10.1001/jamaoncol.2019.0159

Source DB:  PubMed          Journal:  JAMA Oncol        ISSN: 2374-2437            Impact factor:   31.777


  42 in total

1.  A pilot study of volume measurement as a method of tumor response evaluation to aid biomarker development.

Authors:  Binsheng Zhao; Geoffrey R Oxnard; Chaya S Moskowitz; Mark G Kris; William Pao; Pingzhen Guo; Valerie M Rusch; Marc Ladanyi; Naiyer A Rizvi; Lawrence H Schwartz
Journal:  Clin Cancer Res       Date:  2010-06-09       Impact factor: 12.531

2.  Radiologic-pathologic correlation of response to chemoradiation in resectable locally advanced NSCLC.

Authors:  Vishesh Agrawal; Thibaud P Coroller; Ying Hou; Stephanie W Lee; John L Romano; Elizabeth H Baldini; Aileen B Chen; David M Jackman; David Kozono; Scott J Swanson; Jon O Wee; Hugo J W L Aerts; Raymond H Mak
Journal:  Lung Cancer       Date:  2016-10-14       Impact factor: 5.705

3.  Patients Selected for Definitive Concurrent Chemoradiation at High-volume Facilities Achieve Improved Survival in Stage III Non-Small-Cell Lung Cancer.

Authors:  Elyn H Wang; Charles E Rutter; Christopher D Corso; Roy H Decker; Lynn D Wilson; Anthony W Kim; James B Yu; Henry S Park
Journal:  J Thorac Oncol       Date:  2015-06       Impact factor: 15.609

4.  The Lung Image Database Consortium (LIDC) and Image Database Resource Initiative (IDRI): a completed reference database of lung nodules on CT scans.

Authors:  Samuel G Armato; Geoffrey McLennan; Luc Bidaut; Michael F McNitt-Gray; Charles R Meyer; Anthony P Reeves; Binsheng Zhao; Denise R Aberle; Claudia I Henschke; Eric A Hoffman; Ella A Kazerooni; Heber MacMahon; Edwin J R Van Beeke; David Yankelevitz; Alberto M Biancardi; Peyton H Bland; Matthew S Brown; Roger M Engelmann; Gary E Laderach; Daniel Max; Richard C Pais; David P Y Qing; Rachael Y Roberts; Amanda R Smith; Adam Starkey; Poonam Batrah; Philip Caligiuri; Ali Farooqi; Gregory W Gladish; C Matilda Jude; Reginald F Munden; Iva Petkovska; Leslie E Quint; Lawrence H Schwartz; Baskaran Sundaram; Lori E Dodd; Charles Fenimore; David Gur; Nicholas Petrick; John Freymann; Justin Kirby; Brian Hughes; Alessi Vande Casteele; Sangeeta Gupte; Maha Sallamm; Michael D Heath; Michael H Kuhn; Ekta Dharaiya; Richard Burns; David S Fryd; Marcos Salganicoff; Vikram Anand; Uri Shreter; Stephen Vastagh; Barbara Y Croft
Journal:  Med Phys       Date:  2011-02       Impact factor: 4.071

5.  Institutional clinical trial accrual volume and survival of patients with head and neck cancer.

Authors:  Evan J Wuthrick; Qiang Zhang; Mitchell Machtay; David I Rosenthal; Phuc Felix Nguyen-Tan; André Fortin; Craig L Silverman; Adam Raben; Harold E Kim; Eric M Horwitz; Nancy E Read; Jonathan Harris; Qian Wu; Quynh-Thu Le; Maura L Gillison
Journal:  J Clin Oncol       Date:  2014-12-08       Impact factor: 44.544

6.  Cancer treatment and survivorship statistics, 2016.

Authors:  Kimberly D Miller; Rebecca L Siegel; Chun Chieh Lin; Angela B Mariotto; Joan L Kramer; Julia H Rowland; Kevin D Stein; Rick Alteri; Ahmedin Jemal
Journal:  CA Cancer J Clin       Date:  2016-06-02       Impact factor: 508.702

7.  Cancer incidence and mortality worldwide: sources, methods and major patterns in GLOBOCAN 2012.

Authors:  Jacques Ferlay; Isabelle Soerjomataram; Rajesh Dikshit; Sultan Eser; Colin Mathers; Marise Rebelo; Donald Maxwell Parkin; David Forman; Freddie Bray
Journal:  Int J Cancer       Date:  2014-10-09       Impact factor: 7.396

8.  Identifying Medical Diagnoses and Treatable Diseases by Image-Based Deep Learning.

Authors:  Daniel S Kermany; Michael Goldbaum; Wenjia Cai; Carolina C S Valentim; Huiying Liang; Sally L Baxter; Alex McKeown; Ge Yang; Xiaokang Wu; Fangbing Yan; Justin Dong; Made K Prasadha; Jacqueline Pei; Magdalene Y L Ting; Jie Zhu; Christina Li; Sierra Hewett; Jason Dong; Ian Ziyar; Alexander Shi; Runze Zhang; Lianghong Zheng; Rui Hou; William Shi; Xin Fu; Yaou Duan; Viet A N Huu; Cindy Wen; Edward D Zhang; Charlotte L Zhang; Oulan Li; Xiaobo Wang; Michael A Singer; Xiaodong Sun; Jie Xu; Ali Tafreshi; M Anthony Lewis; Huimin Xia; Kang Zhang
Journal:  Cell       Date:  2018-02-22       Impact factor: 41.582

9.  Automatic Segmentation of Lung Carcinoma Using 3D Texture Features in 18-FDG PET/CT.

Authors:  Daniel Markel; Curtis Caldwell; Hamideh Alasti; Hany Soliman; Yee Ung; Justin Lee; Alexander Sun
Journal:  Int J Mol Imaging       Date:  2013-02-26

10.  Deep Deconvolutional Neural Network for Target Segmentation of Nasopharyngeal Cancer in Planning Computed Tomography Images.

Authors:  Kuo Men; Xinyuan Chen; Ye Zhang; Tao Zhang; Jianrong Dai; Junlin Yi; Yexiong Li
Journal:  Front Oncol       Date:  2017-12-20       Impact factor: 6.244

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  16 in total

1.  A novel specific grading standard study of auto-segmentation of organs at risk in thorax: subjective-objective-combined grading standard.

Authors:  Yanchen Ying; Hao Wang; Hua Chen; Jianfan Cheng; Hengle Gu; Yan Shao; Yanhua Duan; Aihui Feng; Wen Feng; Xiaolong Fu; Hong Quan; Zhiyong Xu
Journal:  Biomed Eng Online       Date:  2021-06-03       Impact factor: 2.819

Review 2.  Artificial intelligence in oncology: Path to implementation.

Authors:  Isaac S Chua; Michal Gaziel-Yablowitz; Zfania T Korach; Kenneth L Kehl; Nathan A Levitan; Yull E Arriaga; Gretchen P Jackson; David W Bates; Michael Hassett
Journal:  Cancer Med       Date:  2021-05-07       Impact factor: 4.452

Review 3.  Metrics to evaluate the performance of auto-segmentation for radiation treatment planning: A critical review.

Authors:  Michael V Sherer; Diana Lin; Sharif Elguindi; Simon Duke; Li-Tee Tan; Jon Cacicedo; Max Dahele; Erin F Gillespie
Journal:  Radiother Oncol       Date:  2021-05-11       Impact factor: 6.901

4.  Advancing computational biology and bioinformatics research through open innovation competitions.

Authors:  Andrea Blasco; Michael G Endres; Rinat A Sergeev; Anup Jonchhe; N J Maximilian Macaluso; Rajiv Narayan; Ted Natoli; Jin H Paik; Bryan Briney; Chunlei Wu; Andrew I Su; Aravind Subramanian; Karim R Lakhani
Journal:  PLoS One       Date:  2019-09-27       Impact factor: 3.240

5.  Applying NUDGE to Inform Design of EBP Implementation Strategies in Community Mental Health Settings.

Authors:  Rebecca E Stewart; Rinad S Beidas; Briana S Last; Katelin Hoskins; Y Vivian Byeon; Nathaniel J Williams; Alison M Buttenheim
Journal:  Adm Policy Ment Health       Date:  2021-01

6.  Open Development and Clinical Validation of Multiple 3D-Printed Sample-Collection Swabs: Rapid Resolution of a Critical COVID-19 Testing Bottleneck.

Authors:  Cody J Callahan; Rose Lee; Kate Zulauf; Lauren Tamburello; Keneth P Smith; Joe Previtera; Annie Cheng; Alex Green; Ahmed Abdul Azim; Amanda Yano; Nancy Doraiswami; James Kirby; Ramy Arnaout
Journal:  medRxiv       Date:  2020-04-17

7.  Open Development and Clinical Validation of Multiple 3D-Printed Nasopharyngeal Collection Swabs: Rapid Resolution of a Critical COVID-19 Testing Bottleneck.

Authors:  Rose Lee; Katelyn E Zulauf; Cody J Callahan; Lauren Tamburello; Kenneth P Smith; Joe Previtera; Annie Cheng; Alex Green; Ahmed Abdul Azim; Amanda Yano; Nancy Doraiswami; James E Kirby; Ramy A Arnaout
Journal:  J Clin Microbiol       Date:  2020-07-23       Impact factor: 5.948

8.  National Cancer Institute Workshop on Artificial Intelligence in Radiation Oncology: Training the Next Generation.

Authors:  John Kang; Reid F Thompson; Sanjay Aneja; Constance Lehman; Andrew Trister; James Zou; Ceferino Obcemea; Issam El Naqa
Journal:  Pract Radiat Oncol       Date:  2020-06-13

Review 9.  Master Protocol Trial Design for Efficient and Rational Evaluation of Novel Therapeutic Oncology Devices.

Authors:  Danielle S Bitterman; Daniel N Cagney; Lisa L Singer; Paul L Nguyen; Paul J Catalano; Raymond H Mak
Journal:  J Natl Cancer Inst       Date:  2020-03-01       Impact factor: 13.506

Review 10.  Crowdsourcing in health and medical research: a systematic review.

Authors:  Cheng Wang; Larry Han; Gabriella Stein; Suzanne Day; Cedric Bien-Gund; Allison Mathews; Jason J Ong; Pei-Zhen Zhao; Shu-Fang Wei; Jennifer Walker; Roger Chou; Amy Lee; Angela Chen; Barry Bayus; Joseph D Tucker
Journal:  Infect Dis Poverty       Date:  2020-01-20       Impact factor: 4.520

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