| Literature DB >> 34082755 |
Yanchen Ying1,2, Hao Wang3, Hua Chen1, Jianfan Cheng1, Hengle Gu1, Yan Shao1, Yanhua Duan1, Aihui Feng1, Wen Feng1, Xiaolong Fu1, Hong Quan2, Zhiyong Xu4.
Abstract
BACKGROUND: To develop a novel subjective-objective-combined (SOC) grading standard for auto-segmentation for each organ at risk (OAR) in the thorax.Entities:
Keywords: Auto-segmentation; Organs at risk; SOC grading standard; Thorax
Mesh:
Year: 2021 PMID: 34082755 PMCID: PMC8173789 DOI: 10.1186/s12938-021-00890-8
Source DB: PubMed Journal: Biomed Eng Online ISSN: 1475-925X Impact factor: 2.819
Five geometric indexes between manual contours and auto-segmentation contours for 13 organs at risk in thorax (mean ± SD)
| Structure | DSC | ΔCMD (cm) | ΔV (%) | MHD (cm) | AHD (cm) |
|---|---|---|---|---|---|
| R Lung | 0.96 ± 0.02 | 0.13 ± 0.07 | 7 ± 5 | 2.18 ± 0.72 | 0.11 ± 0.05 |
| L Lung | 0.94 ± 0.03 | 0.28 ± 0.28 | 10 ± 8 | 3.45 ± 2.19 | 0.17 ± 0.12 |
| Skin | 0.93 ± 0.06 | 2.06 ± 2.38 | 11 ± 10 | 8.85 ± 4.21 | 0.58 ± 0.54 |
| Heart | 0.90 ± 0.07 | 0.40 ± 0.40 | 7 ± 10 | 1.85 ± 1.11 | 0.24 ± 0.17 |
| SC | 0.88 ± 0.04 | 1.34 ± 2.01 | 9 ± 7 | 2.74 ± 4.19 | 0.13 ± 0.21 |
| AOR | 0.79 ± 0.10 | 0.92 ± 0.48 | 24 ± 20 | 2.72 ± 1.15 | 0.28 ± 0.16 |
| CW | 0.77 ± 0.05 | 1.29 ± 0.66 | 39 ± 26 | 6.51 ± 1.97 | 0.46 ± 0.19 |
| Trachea | 0.75 ± 0.09 | 0.53 ± 0.31 | 34 ± 51 | 4.27 ± 4.65 | 0.25 ± 0.25 |
| PA | 0.73 ± 0.09 | 0.71 ± 0.44 | 16 ± 10 | 2.12 ± 1.14 | 0.28 ± 0.17 |
| SVC | 0.62 ± 0.09 | 1.17 ± 0.52 | 29 ± 17 | 1.87 ± 0.79 | 0.33 ± 0.13 |
| ESO | 0.57 ± 0.11 | 0.89 ± 0.60 | 33 ± 33 | 2.10 ± 0.74 | 0.29 ± 0.13 |
| IVC | 0.56 ± 0.16 | 0.91 ± 0.62 | 30 ± 25 | 2.17 ± 1.07 | 0.43 ± 0.24 |
| PV | 0.53 ± 0.14 | 1.00 ± 0.49 | 35 ± 24 | 2.65 ± 0.90 | 0.44 ± 0.11 |
Grading results of 13 organs at risk in thorax by five geometric indexes
| Structure | DSC | ΔCMD | ΔV | MHD | AHD | ||||
|---|---|---|---|---|---|---|---|---|---|
| Our center | Velker et al. [ | Ciardo et al. [ | Our center | Ciardo et al. [ | Our center | Our center | Our center | Ciardo et al. [ | |
| R Lung | 3 | 3 | 3 | 3 | 3 | 3 | 2 | 3 | 3 |
| L Lung | 3 | 3 | 3 | 3 | 2 | 3 | 1 | 3 | 2 |
| Skin | 3 | 3 | 3 | 1 | 1 | 2 | 1 | 1 | 1 |
| Heart | 3 | 3 | 3 | 3 | 2 | 3 | 2 | 2 | 2 |
| SC | 3 | 3 | 3 | 1 | 1 | 3 | 1 | 3 | 3 |
| AOR | 2 | 2 | 2 | 2 | 1 | 1 | 1 | 2 | 2 |
| CW | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 |
| Trachea | 2 | 2 | 2 | 2 | 1 | 1 | 1 | 2 | 2 |
| PA | 2 | 2 | 2 | 2 | 1 | 2 | 2 | 2 | 2 |
| SVC | 1 | 2 | 2 | 1 | 1 | 1 | 2 | 2 | 2 |
| ESO | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 2 | 2 |
| IVC | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 |
| PV | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 |
Grading results of 13 organs at risk in thorax by the subjective evaluation standard
| Structure | Average standard slice number | Average slice number to be modified | Average percentage to be modified (%) | Subjective score |
|---|---|---|---|---|
| R Lung | 71 | 5 | 6 | 3 |
| L Lung | 71 | 7 | 10 | 3 |
| Skin | 125 | 19 | 14 | 2 |
| Heart | 31 | 6 | 17 | 2 |
| SC | 124 | 11 | 8 | 3 |
| AOR | 62 | 27 | 41 | 1 |
| CW | 71 | 29 | 42 | 1 |
| Trachea | 47 | 15 | 31 | 1 |
| PA | 12 | 7 | 58 | 1 |
| SVC | 22 | 13 | 57 | 1 |
| ESO | 72 | 54 | 74 | 1 |
| IVC | 13 | 10 | 75 | 1 |
| PV | 9 | 7 | – | 1 |
The SOC grading standard of 13 organs at risk in thorax
| Structure | DSC | ΔCMD (cm) | ΔV (%) | MHD (cm) | AHD (cm) | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2 | 3 | 1 | 2 | 3 | 1 | 2 | 3 | 1 | 2 | 3 | 1 | 2 | 3 | |
| R Lung | – | – | – | – | – | – | – | – | – | – | |||||
| L Lung | 0.45 | 0.10 | 16 | 4 | – | 4.97 | 1.93 | – | 0.26 | 0.08 | |||||
| Skin | 0.96 | 0.97 | 1.11 | 0.48 | 7 | 6 | 13.75 | 7.56 | 7.93 | 0.34 | 0.29 | ||||
| Heart | 0.84 | 0.92 | 0.94 | 0.75 | 0.28 | 0.14 | 14 | 5 | 2 | 2.77 | 1.46 | 1.43 | 0.39 | 0.19 | 0.14 |
| SC | 0.87 | 4.38 | 1.91 | 19 | 12 | 6 | 6.58 | 3.67 | 1.51 | 0.40 | 0.14 | 0.05 | |||
| AOR | 0.57 | 0.20 | 29 | 8 | 6 | 3.01 | 1.56 | 1.50 | |||||||
| CW | – | – | – | – | – | – | – | – | – | – | |||||
| Trachea | 0.72 | 0.81 | – | 0.56 | 0.44 | – | 43 | 8 | – | 4.87 | 2.48 | – | 0.29 | 0.12 | – |
| PA | – | – | – | – | – | – | – | – | – | – | |||||
| SVC | – | – | – | – | – | – | – | – | – | – | |||||
| ESO | – | – | – | – | – | – | – | – | – | – | |||||
| IVC | – | – | – | – | – | – | – | – | – | – | |||||
| PV | – | – | – | – | – | – | – | – | – | – | |||||
Fig.1Correspondences between the subjective evaluation levels and the Dice similarity coefficients (DSC) of six organs at risk in the thorax. Blue represents the DSC value of each patient, and orange represents the mean DSC corresponding to each subjective evaluation level. The dotted line represents the linear trend line of the mean DSC. Red in (a) represents an outlier. It was observed that the auto-segmentation contour not only contained the Lung accurately, but also contained the empty stomach, which could be quickly deleted. So, this auto-segmentation contour still saved a lot of time compared to manual contour, which could be graded as Level 2
Evaluation methods of the auto-segmentation accuracy by geometric indexes in 4 studies
| DSC | ΔCMD(cm) | ΔV(%) | MHD(cm) | AHD(cm) | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Level | 1 | 2 | 3 | 4 | 1 | 2 | 3 | 4 | 1 | 2 | 3 | 4 | 1 | 2 | 3 | 4 | 1 | 2 | 3 | 4 |
| Our center (mean value) | 0–0.7 | 0.7–0.8 | 0.8–1.0 | 1 | > 1.0 | 0.5–1.0 | 0–0.5 | 0 | > 20 | 10–20 | 0–10 | 0 | > 2.2 | 1.0–2.2 | 0–1.0 | 0 | > 0.4 | 0.2–0.4 | 0–0.2 | 0 |
| Velker et al. [ | 0–0.6 | 0.6–0.8 | 0.8–1.0 | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
| Ciardo et al. [ | 0–0.6 | 0.6–0.8 | 0.8–1.0 | – | > 0.5 | 0.2–0.5 | 0–0.2 | – | – | – | – | – | – | – | – | – | > 0.40 | 0.15–0.40 | 0–0.15 | – |
| Lustberg et al. [ | 0.57 | 0.89 | 0.91 | 0.98 | – | – | – | – | – | – | – | – | 2.6 | 1.7 | 1.1 | 0.4 | – | – | – | – |
Evaluation methods of the auto-segmentation accuracy by subjective scoring in 3 studies
| Level | 1 | 2 | 3 | 4 | 5 |
|---|---|---|---|---|---|
| Morris et al. [ | Clinically unacceptable | Major modifications required | Moderate modifications required | Minor modifications required | Clinically acceptable |
| Zhu et al. [ | Useful as autocontoured | Useful with minor edits | Not useful | – | – |
| Lustbrg et al. [ | No result is useful basis for further editing, no time saving | Some results are useful for further editing, little time saving | Many results are useful for further editing, a moderate time saving | Most results are useful for further editing, a significant time saving | – |
Easy-to-operate subjective evaluation standard of the auto-segmentation accuracy
| Level | Auto-segmentation performance | > 10 slices (percentage to be modified) | 3–10 slices (slice number to be modified) | < 3 slices (slice number to be modified) |
|---|---|---|---|---|
| 1 | Auto-segmentation is not recommended | 20%–100% | > 3 | 3 |
| 2 | Many manual modifications are required after auto-segmentation | 10%–20% | 2–3 | 2 |
| 3 | Some manual modifications are required after auto-segmentation | 0–10% | 1 | 1 |
| 4 | Auto-segmentation can completely replace manual delineation | 0 | 0 | 0 |