Literature DB >> 30942594

Artificial Signal Feedback Network Mimicking Cellular Adaptivity.

Hui Liu1, Qiuxia Yang1, Ruizi Peng1, Hailan Kuai1, Yifan Lyu2, Xiaoshu Pan3, Qiaoling Liu1, Weihong Tan1,3.   

Abstract

Inspired by this elegant system of cellular adaptivity, we herein report the rational design of a dynamic artificial adaptive system able to sense and respond to environmental stresses in a unique sense-and-respond mode. Utilizing DNA nanotechnology, we constructed an artificial signal feedback network and anchored it to the surface membrane of a model giant membrane vesicle (GMV) protocell. Such a system would need to both senses incoming stimuli and emit a feedback response to eliminate the stimuli. To accomplish this mechanistically, our DNA-based artificial signal system, hereinafter termed DASsys, was equipped with a DNA trigger-induced DNA polymer formation and dissociation machinery. Thus, through a sequential cascade of stimulus-induced DNA strand displacement, DASsys could effectively sense and respond to incoming stimuli. Then, by eliminating the stimulus, the membrane surface would return to its initial state, realizing the formation of a cyclical feedback mechanism. Overall, our strategy opens up a route to the construction of artificial signaling system capable of maintaining homeostasis in the cellular micromilieu, and addresses important emerging challenges in bioinspired engineering.

Entities:  

Year:  2019        PMID: 30942594      PMCID: PMC6673657          DOI: 10.1021/jacs.8b13816

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  25 in total

1.  Self-reproduction of supramolecular giant vesicles combined with the amplification of encapsulated DNA.

Authors:  Kensuke Kurihara; Mieko Tamura; Koh-Ichiroh Shohda; Taro Toyota; Kentaro Suzuki; Tadashi Sugawara
Journal:  Nat Chem       Date:  2011-09-04       Impact factor: 24.427

2.  Fold-change detection and scalar symmetry of sensory input fields.

Authors:  Oren Shoval; Lea Goentoro; Yuval Hart; Avi Mayo; Eduardo Sontag; Uri Alon
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-20       Impact factor: 11.205

3.  Neural network computation with DNA strand displacement cascades.

Authors:  Lulu Qian; Erik Winfree; Jehoshua Bruck
Journal:  Nature       Date:  2011-07-20       Impact factor: 49.962

4.  Stacking nonenzymatic circuits for high signal gain.

Authors:  Xi Chen; Neima Briggs; Jeremy R McLain; Andrew D Ellington
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-18       Impact factor: 11.205

5.  Cleavage-based signal amplification of RNA.

Authors:  Yongyun Zhao; Li Zhou; Zhuo Tang
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

6.  Regulation of an enzyme cascade reaction by a DNA machine.

Authors:  Ling Xin; Chao Zhou; Zhongqiang Yang; Dongsheng Liu
Journal:  Small       Date:  2013-04-24       Impact factor: 13.281

7.  Diversity in the dynamical behaviour of a compartmentalized programmable biochemical oscillator.

Authors:  Maximilian Weitz; Jongmin Kim; Korbinian Kapsner; Erik Winfree; Elisa Franco; Friedrich C Simmel
Journal:  Nat Chem       Date:  2014-02-16       Impact factor: 24.427

Review 8.  Cell and tissue responses to genotoxic stress.

Authors:  Philip J Coates; Sally A Lorimore; Eric G Wright
Journal:  J Pathol       Date:  2005-01       Impact factor: 7.996

9.  Defining network topologies that can achieve biochemical adaptation.

Authors:  Wenzhe Ma; Ala Trusina; Hana El-Samad; Wendell A Lim; Chao Tang
Journal:  Cell       Date:  2009-08-21       Impact factor: 41.582

10.  Synthetic circuit for exact adaptation and fold-change detection.

Authors:  Jongmin Kim; Ishan Khetarpal; Shaunak Sen; Richard M Murray
Journal:  Nucleic Acids Res       Date:  2014-04-11       Impact factor: 16.971

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  1 in total

1.  Assembly of Dynamic Gated and Cascaded Transient DNAzyme Networks.

Authors:  Jiantong Dong; Yu Ouyang; Jianbang Wang; Michael P O'Hagan; Itamar Willner
Journal:  ACS Nano       Date:  2022-03-16       Impact factor: 18.027

  1 in total

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