Literature DB >> 30933074

Cell-free Protein Expression Using the Rapidly Growing Bacterium Vibrio natriegens.

Daniel J Wiegand1, Henry H Lee2, Nili Ostrov3, George M Church4.   

Abstract

The marine bacterium Vibrio natriegens has garnered considerable attention as an emerging microbial host for biotechnology due to its fast growth rate. A general protocol is described for the preparation of V. natriegens crude cell extracts using common laboratory equipment. This high yielding protocol has been specifically optimized for user accessibility and reduced cost. Cell-free protein synthesis (CFPS) can be carried out in small scale 10 μL batch reactions in either a 96- or 384-well format and reproducibly yields concentrations of > 260 μg/mL super folder GFP (sfGFP) within 3 h. Overall, crude cell extract preparation and CFPS can be achieved in 1-2 full days by a single user. This protocol can be easily integrated into existing protein synthesis pipelines to facilitate advances in bio-production and synthetic biology applications.

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Year:  2019        PMID: 30933074      PMCID: PMC6512795          DOI: 10.3791/59495

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  25 in total

1.  Linear DNA for rapid prototyping of synthetic biological circuits in an Escherichia coli based TX-TL cell-free system.

Authors:  Zachary Z Sun; Enoch Yeung; Clarmyra A Hayes; Vincent Noireaux; Richard M Murray
Journal:  ACS Synth Biol       Date:  2013-12-04       Impact factor: 5.110

Review 2.  Membrane protein production in Escherichia coli cell-free lysates.

Authors:  Erik Henrich; Christopher Hein; Volker Dötsch; Frank Bernhard
Journal:  FEBS Lett       Date:  2015-05-01       Impact factor: 4.124

3.  Metabolism of the fast-growing bacterium Vibrio natriegens elucidated by 13C metabolic flux analysis.

Authors:  Christopher P Long; Jacqueline E Gonzalez; Robert M Cipolla; Maciek R Antoniewicz
Journal:  Metab Eng       Date:  2017-10-16       Impact factor: 9.783

4.  Establishing a high yielding streptomyces-based cell-free protein synthesis system.

Authors:  Jian Li; He Wang; Yong-Chan Kwon; Michael C Jewett
Journal:  Biotechnol Bioeng       Date:  2017-02-23       Impact factor: 4.530

5.  Synthesis of 2.3 mg/ml of protein with an all Escherichia coli cell-free transcription-translation system.

Authors:  Filippo Caschera; Vincent Noireaux
Journal:  Biochimie       Date:  2013-12-08       Impact factor: 4.079

6.  Development of a Bacillus subtilis cell-free transcription-translation system for prototyping regulatory elements.

Authors:  Richard Kelwick; Alexander J Webb; James T MacDonald; Paul S Freemont
Journal:  Metab Eng       Date:  2016-09-30       Impact factor: 9.783

7.  Cell-free protein synthesis system from Escherichia coli cells cultured at decreased temperatures improves productivity by decreasing DNA template degradation.

Authors:  Eiko Seki; Natsuko Matsuda; Shigeyuki Yokoyama; Takanori Kigawa
Journal:  Anal Biochem       Date:  2008-03-07       Impact factor: 3.365

8.  A novel cell-free protein synthesis system.

Authors:  Kalavathy Sitaraman; Dominic Esposito; George Klarmann; Stuart F Le Grice; James L Hartley; Deb K Chatterjee
Journal:  J Biotechnol       Date:  2004-06-10       Impact factor: 3.307

9.  Efficient cell-free expression with the endogenous E. Coli RNA polymerase and sigma factor 70.

Authors:  Jonghyeon Shin; Vincent Noireaux
Journal:  J Biol Eng       Date:  2010-06-24       Impact factor: 4.355

10.  Rapid acquisition and model-based analysis of cell-free transcription-translation reactions from nonmodel bacteria.

Authors:  Simon J Moore; James T MacDonald; Sarah Wienecke; Alka Ishwarbhai; Argyro Tsipa; Rochelle Aw; Nicolas Kylilis; David J Bell; David W McClymont; Kirsten Jensen; Karen M Polizzi; Rebekka Biedendieck; Paul S Freemont
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-17       Impact factor: 11.205

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  5 in total

1.  Novel Viral DNA Polymerases From Metagenomes Suggest Genomic Sources of Strand-Displacing Biochemical Phenotypes.

Authors:  Rachel A Keown; Jacob T Dums; Phillip J Brumm; Joyanne MacDonald; David A Mead; Barbra D Ferrell; Ryan M Moore; Amelia O Harrison; Shawn W Polson; K Eric Wommack
Journal:  Front Microbiol       Date:  2022-04-21       Impact factor: 6.064

Review 2.  Exploring the Potential of Cell-Free Protein Synthesis for Extending the Abilities of Biological Systems.

Authors:  Khushal Khambhati; Gargi Bhattacharjee; Nisarg Gohil; Darren Braddick; Vishwesh Kulkarni; Vijai Singh
Journal:  Front Bioeng Biotechnol       Date:  2019-10-11

3.  A lysate proteome engineering strategy for enhancing cell-free metabolite production.

Authors:  David C Garcia; Jaime Lorenzo N Dinglasan; Him Shrestha; Paul E Abraham; Robert L Hettich; Mitchel J Doktycz
Journal:  Metab Eng Commun       Date:  2021-01-22

Review 4.  Effective Use of Linear DNA in Cell-Free Expression Systems.

Authors:  Megan A McSweeney; Mark P Styczynski
Journal:  Front Bioeng Biotechnol       Date:  2021-07-20

5.  A ubiquitous amino acid source for prokaryotic and eukaryotic cell-free transcription-translation systems.

Authors:  Lakshmeesha K Nagappa; Wakana Sato; Farzana Alam; Kameshwari Chengan; Christopher M Smales; Tobias Von Der Haar; Karen M Polizzi; Katarzyna P Adamala; Simon J Moore
Journal:  Front Bioeng Biotechnol       Date:  2022-09-16
  5 in total

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