| Literature DB >> 30921388 |
Catherine Guezennec1, David Bourhis1, Fanny Orlhac2, Philippe Robin1, Jean-Baptiste Corre1, Olivier Delcroix1, Yves Gobel3, Ulrike Schick4, Pierre-Yves Salaün1, Ronan Abgral1.
Abstract
AIM: Characterizing tumor heterogeneity with textural indices extracted from 18F-fluorodeoxyglucose positron emission tomography (FDG PET/CT) is of growing interest in oncology. Several series showed promising results to predict survival in patients with head and neck squamous cell carcinoma (HNSCC), analyzing various tumor segmentation methods and textural indices. This preliminary study aimed at assessing the inter-observer and inter-segmentation method variability of textural indices in HNSCC pre-therapeutic FDG PET/CT.Entities:
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Year: 2019 PMID: 30921388 PMCID: PMC6438585 DOI: 10.1371/journal.pone.0214299
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Textural indices.
| Matrix | Index |
|---|---|
| Gray-Level Cooccurence Matrix (GLCM) | Homogeneity, Energy, Contrast_glcm, Correlation, Entropy, Dissimilarity |
| Gray-Level Run Length Matrix (GLRLM) | SRE (Short-Run Emphasis), LRE (Long-Run Emphasis), LGRE (Low Gray-Level Run Emphasis), HGRE (Hign Gray-Level Run Emphasis), SRLGE (Short-Run Low Gray-Level Emphasis), SRHGE (Short-Run High Gray-Level Emphasis), LRLGE (Long-Run Low Gray-Level Emphasis), LRHGE (Long-Run High Gray-Level Emphasis), GLNUr (Gray-Level Non Uniformity for run), RLNU (Run Length Non Uniformity), RP (Run Percentage) |
| Neighborhood Gray-Level Dependence Matrix (NGLDM) | Coarseness, Contrast, Busyness |
| Gray-Level Zone Length Matrix (GLZLM) | SZE (Short-Zone Emphasis), LZE (Long-Zone Emphasis), LGZE (Low Gray-Level Zone Emphasis), HGZE (High Gray-Level Zone Emphasis), SZLGE (Short-Zone Low Gray-Level Emphasis), SZHGE (Short-Zone High Gray-Level Emphasis), LZLGE (Long-Zone Low Gray-Level Emphasis), LZHGE (Long-Zone High Gray-Level Emphasis), GLNUz (Gray-Level Non Uniformity for zone), ZLNU (Zone Length Non Uniformity), ZP (Zone Percentage) |
Characteristics of patients.
| Characteristics | Patients (n = 28) | |
|---|---|---|
| Age, y, mean ± SD | 64.8 ± 9.8 | |
| Sex, M/F | 24/4 | |
| Tumor location, no. of patients (%) | ||
| Oral cavity | 8 (28) | |
| Oropharynx | 10 (36) | |
| Hypopharynx | 6 (21) | |
| Larynx | 1 (4) | |
| Extended (≥ 2 subsites) | 3 (11) | |
| AJCC stage, no. of patients (%) | ||
| I | 0 (0) | |
| II | 3 (11) | |
| III | 2 (7) | |
| IV | 23 (82) | |
| T classification, no. of patients (%) | ||
| T1 | 0 (0) | |
| T2 | 7 (25) | |
| T3 | 5 (18) | |
| T4 | 16 (57) | |
Groups of highly correlated indices.
| Groups of highly correlated indices | Absolute correlation coefficients mean ± SD |
|---|---|
| Homogeneity, Contrast_glcm, Dissimilarity, SRE, LRE, RP, Contrast, SZE, ZP | 0.89 ± 0.08 |
| LGZE, SZLGE, LGRE, SRLGE, LRLGE, Energy | 0.93 ± 0.08 |
| HGZE, SZHGE, HGRE, SRHGE, LRHGE | 0.99 ± 0.01 |
| GLNUz, GLNUr, RLNU | 0.94 ± 0.03 |
| Entropy, Coarseness, ZLNU | 0.78 ± 0.08 |
| LZHGE, LZE | 0.85 |
| Correlation | - |
| Busyness | - |
| LZLGE | - |
Textural indices correlation coefficient between themselves and with PET standard quantitative parameters (Pearson test).
| Parameters | SUVmax | MTV | Homogeneity | Correlation | Entropy | Busyness | LZLGE |
|---|---|---|---|---|---|---|---|
| SUVmax | 1 | -0.25 | -0.69 | -0.22 | 0.33 | 0.23 | -0.48 |
| MTV | 1 | 0.69 | 0.69 | 0.55 | 0.17 | 0.73 | |
| Homogeneity | 1 | 0.67 | 0.24 | -0.15 | 0.69 | ||
| Correlation | 1 | 0.52 | 0.07 | 0.58 | |||
| Entropy | 1 | 0.21 | 0.07 | ||||
| Busyness | 1 | 0.03 | |||||
| LZLGE | 1 |
Fig 1Variability between PET-EDGE and 40%SUVmax method.
Bland-Altman plot. (Solid blue line) Bias. (Dashed blue lines) Bias 95% confidence interval. (Dashed red lines) Difference 95% confidence interval.
Fig 2Variability between DAISNE and 40%SUVmax method.
Bland-Altman plot. (Solid blue line) Bias. (Dashed blue lines) Bias 95% confidence interval. (Dashed red lines) Difference 95% confidence interval.
Fig 3Variability between PET-EDGE and DAISNE method.
Bland-Altman plot. (Solid blue line) Bias. (Dashed blue lines) Bias 95% confidence interval. (Dashed red lines) Difference 95% confidence interval.
Fig 4Example of VOI delineating a tumor with the 3 segmentation methods.
(Turquoise blue) PET-EDGE segmentation method. (Sky blue) DAISNE segmentation method. (Dark blue) 40%SUVmax segmentation method. (Top left) FDG PET sagittal slice. (Top right) FDG PET transverse slice. (Bottom left) FDG PET frontal slice. (Bottom right) SUV histograms. With LIFEx software.
Inter-segmentation method variability (Friedman and Wilcoxon test p-values).
| Friedman test | Wilcoxon test p-value | |||
|---|---|---|---|---|
| Parameters | 40%SUVmax vs PET-EDGE vs DAISNE | 40%SUVmax vs PET-EDGE | 40%SUVmax vs DAISNE | PET-EDGE vs DAISNE |
| SUVmax | 1 | 1 | 1 | 1 |
| Volume (mL) | p<0.0001 | p<0.0001 | p<0.0001 | 0.0004 |
| Homogeneity | p<0.0001 | 0.0003 | p<0.0001 | 0.20 |
| Correlation | p<0.0001 | p<0.0001 | p<0.0001 | p<0.0001 |
| Entropy | p<0.0001 | p<0.0001 | p<0.0001 | 0.0002 |
| Busyness | 0.52 | 0.52 | 0.43 | 0.78 |
| LZLGE | p<0.0001 | p<0.0001 | 0.016 | p<0.0001 |
Inter-observer reproducibility (intra-class correlation coefficient).
| Parameters | 40%SUVmax ICC | PET-EDGE | DAISNE |
|---|---|---|---|
| SUVmax | 1 | 1 | 1 |
| MTV | 0.99 | 0.88 | 0.99 |
| Homogeneity | 0.99 | 0.95 | 0.99 |
| Correlation | 0.92 | 0.90 | 0.99 |
| Entropy | 0.99 | 0.92 | 0.98 |
| Busyness | 0.10 | -0.09 | -0.003 |
| LZLGE | 0.99 | 0.04 | 0.99 |