Literature DB >> 30910954

DNA nanostructures coordinate gene silencing in mature plants.

Huan Zhang1, Gozde S Demirer1, Honglu Zhang2, Tianzheng Ye1, Natalie S Goh1, Abhishek J Aditham1, Francis J Cunningham1, Chunhai Fan3,4, Markita P Landry5,6,7,8.   

Abstract

Delivery of biomolecules to plants relies on Agrobacterium infection or biolistic particle delivery, the former of which is amenable only to DNA delivery. The difficulty in delivering functional biomolecules such as RNA to plant cells is due to the plant cell wall, which is absent in mammalian cells and poses the dominant physical barrier to biomolecule delivery in plants. DNA nanostructure-mediated biomolecule delivery is an effective strategy to deliver cargoes across the lipid bilayer of mammalian cells; however, nanoparticle-mediated delivery without external mechanical aid remains unexplored for biomolecule delivery across the cell wall in plants. Herein, we report a systematic assessment of different DNA nanostructures for their ability to internalize into cells of mature plants, deliver siRNAs, and effectively silence a constitutively expressed gene in Nicotiana benthamiana leaves. We show that nanostructure internalization into plant cells and corresponding gene silencing efficiency depends on the DNA nanostructure size, shape, compactness, stiffness, and location of the siRNA attachment locus on the nanostructure. We further confirm that the internalization efficiency of DNA nanostructures correlates with their respective gene silencing efficiencies but that the endogenous gene silencing pathway depends on the siRNA attachment locus. Our work establishes the feasibility of biomolecule delivery to plants with DNA nanostructures and both details the design parameters of importance for plant cell internalization and also assesses the impact of DNA nanostructure geometry for gene silencing mechanisms.

Entities:  

Keywords:  DNA nanotechnology; DNA origami; RNA delivery; plant biotechnology; siRNA gene silencing

Mesh:

Substances:

Year:  2019        PMID: 30910954      PMCID: PMC6462094          DOI: 10.1073/pnas.1818290116

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  41 in total

1.  Molecular structure of nucleic acids; a structure for deoxyribose nucleic acid.

Authors:  J D WATSON; F H CRICK
Journal:  Nature       Date:  1953-04-25       Impact factor: 49.962

2.  Self-assembled DNA nanoclews for the efficient delivery of CRISPR-Cas9 for genome editing.

Authors:  Wujin Sun; Wenyan Ji; Jordan M Hall; Quanyin Hu; Chao Wang; Chase L Beisel; Zhen Gu
Journal:  Angew Chem Int Ed Engl       Date:  2015-08-27       Impact factor: 15.336

Review 3.  RNA silencing pathways in plants.

Authors:  A J Herr; D C Baulcombe
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2004

4.  Folding DNA to create nanoscale shapes and patterns.

Authors:  Paul W K Rothemund
Journal:  Nature       Date:  2006-03-16       Impact factor: 49.962

5.  Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules.

Authors:  S B Smith; Y Cui; C Bustamante
Journal:  Science       Date:  1996-02-09       Impact factor: 47.728

6.  A gene cluster encoding lectin receptor kinases confers broad-spectrum and durable insect resistance in rice.

Authors:  Yuqiang Liu; Han Wu; Hong Chen; Yanling Liu; Jun He; Haiyan Kang; Zhiguang Sun; Gen Pan; Qi Wang; Jinlong Hu; Feng Zhou; Kunneng Zhou; Xiaoming Zheng; Yulong Ren; Liangming Chen; Yihua Wang; Zhigang Zhao; Qibing Lin; Fuqing Wu; Xin Zhang; Xiuping Guo; Xianian Cheng; Ling Jiang; Chuanyin Wu; Haiyang Wang; Jianmin Wan
Journal:  Nat Biotechnol       Date:  2014-12-08       Impact factor: 54.908

7.  Stiffness-dependent in vitro uptake and lysosomal acidification of colloidal particles.

Authors:  Raimo Hartmann; Marcel Weidenbach; Martin Neubauer; Andreas Fery; Wolfgang J Parak
Journal:  Angew Chem Int Ed Engl       Date:  2014-12-05       Impact factor: 15.336

Review 8.  RNA interference: the story of gene silencing in plants and humans.

Authors:  Imran Ali; Tayyab Husnain; Sheikh Riazuddin
Journal:  Biotechnol Adv       Date:  2007-12-23       Impact factor: 14.227

9.  Carbon nanotubes as molecular transporters for walled plant cells.

Authors:  Qiaoling Liu; Bo Chen; Qinli Wang; Xiaoli Shi; Zeyu Xiao; Jinxin Lin; Xiaohong Fang
Journal:  Nano Lett       Date:  2009-03       Impact factor: 11.189

Review 10.  Silencing signals in plants: a long journey for small RNAs.

Authors:  Attila Molnar; Charles Melnyk; David C Baulcombe
Journal:  Genome Biol       Date:  2011-01-11       Impact factor: 13.583

View more
  31 in total

1.  Biomolecular Functionalization of a Nanomaterial To Control Stability and Retention within Live Cells.

Authors:  Mitchell Gravely; Mohammad Moein Safaee; Daniel Roxbury
Journal:  Nano Lett       Date:  2019-08-23       Impact factor: 11.189

2.  A Novel Ternary Vector System United with Morphogenic Genes Enhances CRISPR/Cas Delivery in Maize.

Authors:  Qiang Zhang; Yu Zhang; Min-Hui Lu; Yi-Ping Chai; Yuan-Yuan Jiang; Yun Zhou; Xue-Chen Wang; Qi-Jun Chen
Journal:  Plant Physiol       Date:  2019-09-26       Impact factor: 8.340

3.  Genetically Modified Organism-Free RNA Interference: Exogenous Application of RNA Molecules in Plants.

Authors:  Athanasios Dalakouras; Michael Wassenegger; Elena Dadami; Ioannis Ganopoulos; Maria L Pappas; Kalliope Papadopoulou
Journal:  Plant Physiol       Date:  2019-07-08       Impact factor: 8.340

Review 4.  Engineering Lipid Membranes with Programmable DNA Nanostructures.

Authors:  Qi Shen; Michael W Grome; Yang Yang; Chenxiang Lin
Journal:  Adv Biosyst       Date:  2019-12-09

5.  Carbon Dots for Efficient Small Interfering RNA Delivery and Gene Silencing in Plants.

Authors:  Steven H Schwartz; Bill Hendrix; Paul Hoffer; Rick A Sanders; Wei Zheng
Journal:  Plant Physiol       Date:  2020-08-06       Impact factor: 8.340

6.  Engineering DNA nanostructures for siRNA delivery in plants.

Authors:  Huan Zhang; Honglu Zhang; Gozde S Demirer; Eduardo González-Grandío; Chunhai Fan; Markita P Landry
Journal:  Nat Protoc       Date:  2020-08-17       Impact factor: 13.491

Review 7.  RNAs - a new frontier in crop protection.

Authors:  Dongdong Niu; Rachael Hamby; Jonatan Nino Sanchez; Qiang Cai; Qin Yan; Hailing Jin
Journal:  Curr Opin Biotechnol       Date:  2021-07-01       Impact factor: 9.740

Review 8.  Genome editing reagent delivery in plants.

Authors:  Rishikesh Ghogare; Yvonne Ludwig; Gela Myan Bueno; Inez H Slamet-Loedin; Amit Dhingra
Journal:  Transgenic Res       Date:  2021-03-16       Impact factor: 2.788

Review 9.  Antiviral strategies targeting herpesviruses.

Authors:  Haisi Dong; Zeyu Wang; Daqing Zhao; Xiangyang Leng; Yicheng Zhao
Journal:  J Virus Erad       Date:  2021-05-30

10.  Topical Application of Double-Stranded RNA Targeting 2b and CP Genes of Cucumber mosaic virus Protects Plants against Local and Systemic Viral Infection.

Authors:  Maria C Holeva; Athanasios Sklavounos; Rajendran Rajeswaran; Mikhail M Pooggin; Andreas E Voloudakis
Journal:  Plants (Basel)       Date:  2021-05-12
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.