| Literature DB >> 30899306 |
Tairine Zara-Lopes1, Ana Lívia Silva Galbiatti-Dias1, Márcia M Urbanin Castanhole-Nunes1, João Armando Padovani-Júnior2, José Victor Maniglia2, Erika Cristina Pavarino1, Eny Maria Goloni-Bertollo1.
Abstract
INTRODUCTION: Polymorphisms in genes coding enzymes involved in folate metabolism may cause alterations in this metabolic pathway and contribute to carcinogenesis, because folate is essential for DNA synthesis, methylation and repair. The objective of this study was to investigate the association of MTHFR 677C>T (rs1801133), MTR 2756A>G (rs1805087), RFC1 80A>G (rs1051266) and CßS 844ins(68) (no rs#) polymorphisms and thyroid cancer development. The association of these polymorphisms with demographic risk factors and clinical histopathological parameters was also evaluated.Entities:
Keywords: genes; genetic polymorphism; thyroid cancer
Year: 2019 PMID: 30899306 PMCID: PMC6425207 DOI: 10.5114/aoms.2018.73091
Source DB: PubMed Journal: Arch Med Sci ISSN: 1734-1922 Impact factor: 3.318
List of primer sequences
| Polymorphism | Sequence of primers |
|---|---|
| Sense | 5’- TGA AGG AGA AGG TGT CTG CGG GA 3’ |
| Antisense | 5’- AGG ACG GTG CGG TGA GAG TG 3’ |
| Sense | 5’- CCA GGG TGC CAG GTA TAC AG 3’ |
| Antisense | 5’- GCC TTT TAC ACT CCT CAA AAC 3’ |
| Sense | 5’- AGT GTC ACC TTC GTC CC 3’ |
| Antisense | 5’- TCC CGC GTG AAG TTC TTG 3’ |
| Sense | 5’- GTT GTT AAC GGC GGT ATT GG 3’ |
| Antisense | 5’- GTT GTC TGC TCC GTC TGG TT 3’ |
Association between MTHFR 677C>T, MTR 2756A>G, RFC1 80A>G and CßS 844ins(68) polymorphisms and thyroid cancer
| Model | Genotype | Control | Case | OR | Genotype | Control | Case | OR | ||
|---|---|---|---|---|---|---|---|---|---|---|
| MTHFR 677C>T | MTR 2756A>G | |||||||||
| Codominant | C/C | 174 (56) | 63 (41.7) | 1.00 | A/A | 197 (63.3) | 89 (58.9) | 1.00 | ||
| C/T | 114 (36.7) | 63 (41.7) | 1.53 (0.99–2.35) | < 0.01 | A/G | 100 (32.1) | 50 (33.1) | 1.13 (0.74–1.74) | 0.4 | |
| T/T | 23 (7.4) | 25 (16.6) | 2.87 (1.50–5.48) | G/G | 14 (4.5) | 12 (8) | 1.75 (0.77–4.02) | |||
| Dominant | C/C | 174 (56) | 63 (41.7) | 1.00 | A/A | 197 (63.3) | 89 (58.9) | 1.00 | ||
| C/T-T/T | 137 (44) | 88 (58.3) | 1.76 (1.18–2.64) | < 0.01[ | A/G-G/G | 114 (36.7) | 62 (41.1) | 1.21 (0.81–1.82) | 0.35 | |
| Recessive | C/C-C/T | 288 (92.6) | 126 (83.4) | 1.00 | A/A-A/G | 297 (95.5) | 139 (92) | 1.00 | ||
| T/T | 23 (7.4) | 25 (16.6) | 2.37 (1.28–4.39) | < 0.01 | G/G | 14 (4.5) | 12 (8) | 1.68 (0.74–3.80) | 0.22 | |
| Overdominant | C/C-T/T | 197 (63.3) | 88 (58.3) | 1.00 | A/A-G/G | 211 (67.8) | 101 (66.9) | 1.00 | ||
| C/T | 114 (36.7) | 63 (41.7) | 1.24 (0.83–1.87) | 0.3 | A/G | 100 (32.1) | 50 (33.1) | 1.08 (0.70–1.64) | 0.74 | |
| Additive | – | – | – | 1.64 (0.88–1.90) | 0.3 | – | – | – | 1.23 (0.89–1.70) | 0.22 |
| RFC1 80A>G | CßS 844ins(68) | |||||||||
| Codominant | A/A | 125 (40.2) | 45 (29.8) | 1.00 | W/W | 251 (80.7) | 119 (78.8) | 1.00 | ||
| A/G | 109 (35) | 65 (43) | 1.71 (1.07–2.74) | 0.07 | W/Ins | 56 (18) | 30 (19.9) | 1.17 (0.71–1.94) | 0.83 | |
| G/G | 77 (24.8) | 41 (27.1) | 1.35 (0.80–2.27) | Ins/Ins | 4 (1.3) | 2 (1.3) | 1.07 (0.19–6.11) | |||
| Dominant | A/A | 125 (40.2) | 45 (29.8) | 1.00 | W/W | 251 (80.7) | 119 (78.8) | 1.00 | ||
| A/G-G/G | 186 (59.8) | 106 (70.2) | 1.02 (0.65–1.60) | 0.94 | W/Ins - Ins/Ins | 60 (19.3) | 32 (21.2) | 1.16 (0.71–1.90) | 0.55 | |
| Recessive | A/A-A/G | 234 (75.2) | 110 (72.8) | 1.00 | W/W | 307 (98.7) | 149 (98.7) | 1.00 | ||
| G/G | 77 (24.8) | 41 (27.1) | 1.55 (1.02–2.38) | 0.04[ | Ins/Ins | 4 (1.3) | 2 (1.3) | 1.04 (0.18–5.92) | 0.97 | |
| Overdominant | A/A-G/G | 202 (65) | 86 (57) | 1.00 | W/W | 255 (82) | 121 (80.1) | 1.00 | ||
| A/G | 109 (35) | 65 (43) | 1.51 (1.00–2.27) | 0.05 | W/Ins | 56 (18) | 30 (19.9) | 1.17 (0.71–1.93) | 0.55 | |
| Additive | – | – | – | 1.18 (0.92–1.53) | 0.19 | – | – | – | 1.13 (0.73–1.77) | 0.58 |
Odds ratio (OR) adjusted for gender, age, alcohol and tobacco consumption and body mass index (BMI). W/W (homozygous wild type without 68 base pairs (bp) insertion; W/Ins (heterozygous genotype); Ins/Ins (homozygous polymorphic with 68 base pairs (bp) insertion).
Significant at p < 0.05.
Distribution of demographic risk factors in patients with thyroid cancer and control individuals
| Variable | Patients ( | Controls ( | OR | |
|---|---|---|---|---|
| Gender: | ||||
| Male | 15 (9.94) | 37 (11.90) | 1.00 (ref.) | |
| Female | 136 (90.06) | 274 (88.10) | 1.07 (0.55–2.10) | 0.84 |
| Age [years]: | ||||
| < 50 | 73 (48.34) | 174 (55.94) | 1.00 (ref.) | |
| ≥ 50 | 78 (51.66) | 137 (44.66) | 1.21 (0.80–1.81) | 0.36 |
| Alcohol consumption: | ||||
| No | 107 (70.87) | 191 (61.42) | 1.00 (ref.) | |
| Yes | 44 (29.13) | 120 (38.58) | 0.56 (0.36–0.89) | < 0.001 |
| Tobacco consumption: | ||||
| No | 89 (58.95) | 222 (71.38) | 1.00 (ref.) | |
| Yes | 62 (41.05) | 89 (28.62) | 1.97 (1.28–3.04) | < 0.001 |
| BMI [kg/m²]: | ||||
| < 25.0 | 40 (26.49) | 99 (31.83) | 1.00 (ref.) | |
| ≥ 25.0 | 111 (73.51) | 212 (68.17) | 1.24 (0.79–1.94) | 0.35 |
Odds ratio (OR) adjusted for gender, age, alcohol and tobacco consumption, body mass index (BMI) and polymorphisms.
Significant at p < 0.05.
Distribution of clinical histopathological parameters in relation to MTHFR 677C>T, MTR 2756A>G, RFC1 80A>G and CßS 844ins(68) polymorphisms in patients with thyroid cancer
| Variable | Tumor extent | Regional lymph node involvement | Aggressiveness | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| T1/T2 | T3/T4 | OR[ | OR[ | Non-aggressive | Aggressive | OR[ | |||||||
| 108 (71.52) | 43 (28.48) | 125 (82.78) | 26 (17.22) | 118 (78.14) | 33 (21.86) | ||||||||
| C/C | 44 (40.74) | 19 (44.18) | 1.00 | 50 (40.00) | 13 (50.00) | 1.00 | 52 (44.06) | 11 (33.34) | 1.00 | ||||
| C/T – T/T | 64 (59.26) | 24 (55.82) | 0.73 (0.34–1.56) | 0.41 | 75 (60.00) | 13 (50.00) | 0.72 (0.29–1.75) | 0.46 | 66 (55.94) | 22 (66.66) | 0.98 (0.37–2.63) | 0.97 | |
| A/A | 69 (63.88) | 20 (46.51) | 1.00 | 74 (59.20) | 15 (57.69) | 1.00 | 76 (64.40) | 13 (39.40) | 1.00 | ||||
| A/G – G/G | 39 (36.12) | 23 (53.49) | 2.69 (1.27–5.71) | 0.01 | 51 (40.80) | 11 (42.31) | 1.07 (0.44–2.65) | 0.87 | 42 (35.60) | 20 (60.60) | 4.51 (1.67–12.1) | < 0.01 | |
| A/A | 33 (30.55) | 12 (27.90) | 1.00 | 38 (30.40) | 07 (26.92) | 1.00 | 38 (32.20) | 07 (21.22) | 1.00 | ||||
| A/G – G/G | 75 (69.45) | 31 (72.10) | 0.83 (0.36–1.90) | 0.65 | 87(69.60) | 19 (73.08) | 1.63 (0.58–4.56) | 0.35 | 80 (67.80) | 26 (78.78) | 1.08 (0.36–3.26) | 0.89 | |
| W/W | 83 (76.85) | 36 (83.72) | 1.00 | 101(80.80) | 18 (69.23) | 1.00 | 91 (77.11) | 28 (84.84) | 1.00 | ||||
| W/Ins – Ins/Ins | 25 (23.15) | 07 (16.28) | 0.68 (0.26–1.75) | 0.42 | 24 (19.20) | 08 (30.77) | 1.95 (0.72–5.28) | 0.19 | 27 (22.89) | 05 (15.16) | 0.64 (0.19–2.19) | 0.18 | |
Odds ratio (OR) adjusted for gender, age, alcohol and tobacco consumption. W/W (homozygous wild type without 68 base pairs (bp) insertion); W/Ins (heterozygous genotype); Ins/Ins (homozygous polymorphic with 68 base pairs (bp) insertion).
Significant at p < 0.05.
Association between MTHFR 677C>T, MTR 2756A>G, RFC1 80A>G and CßS 844ins(68) polymorphisms and extrathyroid extension
| Variable | Absence | Presence | OR[ | |
|---|---|---|---|---|
| C/C | 49 (41.88) | 14 (41.17) | 1.00 | |
| C/T – T/T | 68 (58.12) | 20 (58.83) | 0.85 (0.37–1.94) | 0.69 |
| A/A | 72 (61.53) | 17 (50.00) | 1.00 | |
| A/G – G/G | 45 (38.47) | 17 (50.00) | 1.72 (0.77–3.87) | 0.18 |
| A/A | 37 (31.62) | 08 (23.52) | 1.00 | |
| A/G – G/G | 80 (68.38) | 26 (76.48) | 1.43 (0.56–3.68) | 0.45 |
| W/W | 91 (77.77) | 28 (82.35) | 1.00 | |
| W/Ins – Ins/Ins | 26 (22.23) | 06 (17.65) | 0.77 (0.28–2.15) | 0.62 |
Odds ratio (OR) adjusted for gender, age, alcohol and tobacco consumption, BMI and polymorphisms.
Significant at p < 0.05.