Literature DB >> 30895404

A rapid, sensitive and inexpensive method for detection of grapevine red blotch virus without tissue extraction using loop-mediated isothermal amplification.

J Lucina Romero Romero1, Gavriela Dena Carver2, Patricio Arce Johnson3, Keith L Perry2, Jeremy R Thompson4.   

Abstract

Grapevine red blotch virus (GRBV) is an emerging virus of significant viticultural importance throughout North America. Here, we report the development of a simple protocol for point-of-use detection of GRBV. Extraction of nucleic acids is not required; instead, the whole intact plant can simply be pricked with a sterile pipette tip, which is then incubated in sterile distilled water to provide the sample template in a loop-mediated isothermal amplification (LAMP) reaction. This method is 10,000 times more sensitive than conventional PCR, costs under a dollar per sample, and can be completed from sampling to readout in just over half an hour.

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Year:  2019        PMID: 30895404     DOI: 10.1007/s00705-019-04207-y

Source DB:  PubMed          Journal:  Arch Virol        ISSN: 0304-8608            Impact factor:   2.574


  6 in total

1.  Initial Evaluation of a Mobile SARS-CoV-2 RT-LAMP Testing Strategy.

Authors:  Christina M Newman; Mitchell D Ramuta; Matthew T McLaughlin; Roger W Wiseman; Julie A Karl; Dawn M Dudley; Miranda R Stauss; Robert J Maddox; Andrea M Weiler; Mason I Bliss; Katrina N Fauser; Luis A Haddock; Cecilia G Shortreed; Amelia K Haj; Molly A Accola; Anna S Heffron; Hailey E Bussan; Matthew R Reynolds; Olivia E Harwood; Ryan V Moriarty; Laurel M Stewart; Chelsea M Crooks; Trent M Prall; Emma K Neumann; Elizabeth D Somsen; Corrie B Burmeister; Kristi L Hall; William M Rehrauer; Thomas C Friedrich; Shelby L O'Connor; David H O'Connor
Journal:  J Biomol Tech       Date:  2021-09

2.  A Primer on Emerging Field-Deployable Synthetic Biology Tools for Global Water Quality Monitoring.

Authors:  Walter Thavarajah; Matthew S Verosloff; Jaeyoung K Jung; Khalid K Alam; Joshua D Miller; Michael C Jewett; Sera L Young; Julius B Lucks
Journal:  NPJ Clean Water       Date:  2020-04-03

Review 3.  Loop Mediated Isothermal Amplification: Principles and Applications in Plant Virology.

Authors:  Stefano Panno; Slavica Matić; Antonio Tiberini; Andrea Giovanni Caruso; Patrizia Bella; Livio Torta; Raffaele Stassi; And Salvatore Davino
Journal:  Plants (Basel)       Date:  2020-04-06

4.  Initial evaluation of a mobile SARS-CoV-2 RT-LAMP testing strategy.

Authors:  Christina M Newman; Mitchell D Ramuta; Matthew T McLaughlin; Roger W Wiseman; Julie A Karl; Dawn M Dudley; Miranda R Stauss; Robert J Maddox; Andrea M Weiler; Mason I Bliss; Katrina N Fauser; Luis A Haddock; Cecilia G Shortreed; Amelia K Haj; Molly A Accola; Anna S Heffron; Hailey E Bussan; Matthew R Reynolds; Olivia E Harwood; Ryan V Moriarty; Laurel M Stewart; Chelsea M Crooks; Trent M Prall; Emma K Neumann; Elizabeth D Somsen; Corrie B Burmeister; Kristi L Hall; William M Rehrauer; Thomas C Friedrich; Shelby L O'Connor; David H O'Connor
Journal:  medRxiv       Date:  2021-02-27

5.  Development of a LAMP assay using a portable device for the real-time detection of cotton leaf curl disease in field conditions.

Authors:  Amna Rafiq; Waqas Rafique Ali; Muhammad Asif; Nasim Ahmed; Waheed S Khan; Shahid Mansoor; Sadia Zafar Bajwa; Imran Amin
Journal:  Biol Methods Protoc       Date:  2021-05-06

6.  Improved visual detection of DNA amplification using pyridylazophenol metal sensing dyes.

Authors:  Yinhua Zhang; Eric A Hunt; Esta Tamanaha; Ivan R Corrêa; Nathan A Tanner
Journal:  Commun Biol       Date:  2022-09-21
  6 in total

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