Literature DB >> 34267944

A Primer on Emerging Field-Deployable Synthetic Biology Tools for Global Water Quality Monitoring.

Walter Thavarajah1,2,3,4, Matthew S Verosloff2,3,4,5, Jaeyoung K Jung1,2,3,4, Khalid K Alam1,2,3,4, Joshua D Miller3,6, Michael C Jewett1,2, Sera L Young3,6,7, Julius B Lucks1,2,3,4.   

Abstract

Tracking progress towards Target 6.1 of the United Nations Sustainable Development Goals, "achieving universal and equitable access to safe and affordable drinking water for all", necessitates the development of simple, inexpensive tools to monitor water quality. The rapidly growing field of synthetic biology has the potential to address this need by taking DNA-encoded sensing elements from nature and reassembling them to create field-deployable 'biosensors' that can detect pathogenic or chemical water contaminants. Here we describe water quality monitoring strategies enabled by synthetic biology and compare them to previous approaches used to detect three priority water contaminants: fecal pathogens, arsenic, and fluoride in order to explain the potential for engineered biosensors to simplify and decentralize water quality monitoring. We also briefly discuss expanding biosensors to detect emerging contaminants including metals and pharmaceuticals. We conclude with an outlook on the future of biosensor development, in which we discuss adaptability to emerging contaminants, outline current limitations, and propose steps to overcome the field's outstanding challenges to facilitate global water quality monitoring.

Entities:  

Year:  2020        PMID: 34267944      PMCID: PMC8279131          DOI: 10.1038/s41545-020-0064-8

Source DB:  PubMed          Journal:  NPJ Clean Water        ISSN: 2059-7037


  64 in total

1.  From millennium development goals to sustainable development goals.

Authors:  Jeffrey D Sachs
Journal:  Lancet       Date:  2012-06-09       Impact factor: 79.321

2.  Arsenic poisoning of Bangladesh groundwater.

Authors:  R Nickson; J McArthur; W Burgess; K M Ahmed; P Ravenscroft; M Rahman
Journal:  Nature       Date:  1998-09-24       Impact factor: 49.962

Review 3.  The coming of age of de novo protein design.

Authors:  Po-Ssu Huang; Scott E Boyken; David Baker
Journal:  Nature       Date:  2016-09-15       Impact factor: 49.962

4.  Whole-cell biosensors for environmental monitoring.

Authors:  D M Rawson; A J Willmer; A P Turner
Journal:  Biosensors       Date:  1989

5.  Development of a set of simple bacterial biosensors for quantitative and rapid measurements of arsenite and arsenate in potable water.

Authors:  Judith Stocker; Denisa Balluch; Monika Gsell; Hauke Harms; Jessika Feliciano; Sylvia Daunert; Khurseed A Malik; Jan Roelof van der Meer
Journal:  Environ Sci Technol       Date:  2003-10-15       Impact factor: 9.028

6.  Rapid screening of quorum-sensing signal N-acyl homoserine lactones by an in vitro cell-free assay.

Authors:  Tomohiro Kawaguchi; Yung Pin Chen; R Sean Norman; Alan W Decho
Journal:  Appl Environ Microbiol       Date:  2008-04-18       Impact factor: 4.792

7.  The world's road to water scarcity: shortage and stress in the 20th century and pathways towards sustainability.

Authors:  M Kummu; J H A Guillaume; H de Moel; S Eisner; M Flörke; M Porkka; S Siebert; T I E Veldkamp; P J Ward
Journal:  Sci Rep       Date:  2016-12-09       Impact factor: 4.379

8.  Point-of-care biomarker quantification enabled by sample-specific calibration.

Authors:  Monica P McNerney; Yan Zhang; Paige Steppe; Adam D Silverman; Michael C Jewett; Mark P Styczynski
Journal:  Sci Adv       Date:  2019-09-25       Impact factor: 14.136

9.  CRISPR-Cas12a target binding unleashes indiscriminate single-stranded DNase activity.

Authors:  Janice S Chen; Enbo Ma; Lucas B Harrington; Maria Da Costa; Xinran Tian; Joel M Palefsky; Jennifer A Doudna
Journal:  Science       Date:  2018-02-15       Impact factor: 47.728

10.  Low-cost detection of norovirus using paper-based cell-free systems and synbody-based viral enrichment.

Authors:  Duo Ma; Luhui Shen; Kaiyue Wu; Chris W Diehnelt; Alexander A Green
Journal:  Synth Biol (Oxf)       Date:  2018-09-19
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  4 in total

Review 1.  Flow-Injection Methods in Water Analysis-Recent Developments.

Authors:  Marek Trojanowicz; Marta Pyszynska
Journal:  Molecules       Date:  2022-02-19       Impact factor: 4.411

2.  Perspective: The Importance of Water Security for Ensuring Food Security, Good Nutrition, and Well-being.

Authors:  Sera L Young; Edward A Frongillo; Zeina Jamaluddine; Hugo Melgar-Quiñonez; Rafael Pérez-Escamilla; Claudia Ringler; Asher Y Rosinger
Journal:  Adv Nutr       Date:  2021-07-30       Impact factor: 8.701

3.  Development of Cas12a-Based Cell-Free Small-Molecule Biosensors via Allosteric Regulation of CRISPR Array Expression.

Authors:  Ahmed Mahas; Qiaochu Wang; Tin Marsic; Magdy M Mahfouz
Journal:  Anal Chem       Date:  2022-03-10       Impact factor: 6.986

Review 4.  Water Security and Nutrition: Current Knowledge and Research Opportunities.

Authors:  Joshua D Miller; Cassandra L Workman; Sarita V Panchang; Gretchen Sneegas; Ellis A Adams; Sera L Young; Amanda L Thompson
Journal:  Adv Nutr       Date:  2021-12-01       Impact factor: 8.701

  4 in total

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