Literature DB >> 30851288

Plugged into the Ku-DNA hub: The NHEJ network.

Philippe Frit1, Virginie Ropars2, Mauro Modesti3, Jean Baptiste Charbonnier4, Patrick Calsou5.   

Abstract

In vertebrates, double-strand breaks in DNA are primarily repaired by Non-Homologous End-Joining (NHEJ). The ring-shaped Ku heterodimer rapidly senses and threads onto broken DNA ends forming a recruiting hub. Through protein-protein contacts eventually reinforced by protein-DNA interactions, the Ku-DNA hub attracts a series of specialized proteins with scaffolding and/or enzymatic properties. To shed light on these dynamic interplays, we review here current knowledge on proteins directly interacting with Ku and on the contact points involved, with a particular accent on the different classes of Ku-binding motifs identified in several Ku partners. An integrated structural model of the core NHEJ network at the synapsis step is proposed.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Keywords:  Conserved binding motifs; DNA damage; DNA repair machineries; Double-strand breaks; Ku; NHEJ; Protein interactions network

Mesh:

Substances:

Year:  2019        PMID: 30851288     DOI: 10.1016/j.pbiomolbio.2019.03.001

Source DB:  PubMed          Journal:  Prog Biophys Mol Biol        ISSN: 0079-6107            Impact factor:   3.667


  17 in total

Review 1.  The Ku complex: recent advances and emerging roles outside of non-homologous end-joining.

Authors:  Sanna Abbasi; Gursimran Parmar; Rachel D Kelly; Nileeka Balasuriya; Caroline Schild-Poulter
Journal:  Cell Mol Life Sci       Date:  2021-04-15       Impact factor: 9.261

Review 2.  Chaperoning histones at the DNA repair dance.

Authors:  Ujani Chakraborty; Zih-Jie Shen; Jessica Tyler
Journal:  DNA Repair (Amst)       Date:  2021-10-13

3.  Uncovering Bleomycin-Induced Genomic Alterations and Underlying Mechanisms in the Yeast Saccharomyces cerevisiae.

Authors:  Dao-Qiong Zheng; Yu-Ting Wang; Ying-Xuan Zhu; Huan Sheng; Ke-Jing Li; Yang Sui; Ke Zhang
Journal:  Appl Environ Microbiol       Date:  2021-11-03       Impact factor: 5.005

4.  The canonical non-homologous end joining factor XLF promotes chromosomal deletion rearrangements in human cells.

Authors:  Ragini Bhargava; Felicia Wednesday Lopezcolorado; L Jillianne Tsai; Jeremy M Stark
Journal:  J Biol Chem       Date:  2019-11-21       Impact factor: 5.157

Review 5.  CRISPR-based genome editing through the lens of DNA repair.

Authors:  Tarun S Nambiar; Lou Baudrier; Pierre Billon; Alberto Ciccia
Journal:  Mol Cell       Date:  2022-01-20       Impact factor: 17.970

Review 6.  Repair of DNA Double-Strand Breaks by the Nonhomologous End Joining Pathway.

Authors:  Benjamin M Stinson; Joseph J Loparo
Journal:  Annu Rev Biochem       Date:  2021-02-08       Impact factor: 27.258

7.  XLF acts as a flexible connector during non-homologous end joining.

Authors:  Sean M Carney; Andrew T Moreno; Sadie C Piatt; Metztli Cisneros-Aguirre; Felicia Wednesday Lopezcolorado; Jeremy M Stark; Joseph J Loparo
Journal:  Elife       Date:  2020-12-08       Impact factor: 8.140

8.  SAP domain forms a flexible part of DNA aperture in Ku70/80.

Authors:  Aleš Hnízda; Petr Tesina; Thanh-Binh Nguyen; Zdeněk Kukačka; Lukas Kater; Amanda K Chaplin; Roland Beckmann; David B Ascher; Petr Novák; Tom L Blundell
Journal:  FEBS J       Date:  2021-02-16       Impact factor: 5.622

9.  Zinc finger protein ZNF384 is an adaptor of Ku to DNA during classical non-homologous end-joining.

Authors:  Jenny Kaur Singh; Rebecca Smith; Magdalena B Rother; Anton J L de Groot; Wouter W Wiegant; Kees Vreeken; Ostiane D'Augustin; Robbert Q Kim; Haibin Qian; Przemek M Krawczyk; Román González-Prieto; Alfred C O Vertegaal; Meindert Lamers; Sébastien Huet; Haico van Attikum
Journal:  Nat Commun       Date:  2021-11-12       Impact factor: 14.919

10.  Functional diversification of Paramecium Ku80 paralogs safeguards genome integrity during precise programmed DNA elimination.

Authors:  Arthur Abello; Vinciane Régnier; Olivier Arnaiz; Romain Le Bars; Mireille Bétermier; Julien Bischerour
Journal:  PLoS Genet       Date:  2020-04-16       Impact factor: 5.917

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