Literature DB >> 24673254

Development of a metabolomic radiation signature in urine from patients undergoing total body irradiation.

Evagelia C Laiakis1, Tytus D Mak, Sebastien Anizan, Sally A Amundson, Christopher A Barker, Suzanne L Wolden, David J Brenner, Albert J Fornace.   

Abstract

The emergence of the threat of radiological terrorism and other radiological incidents has led to the need for development of fast, accurate and noninvasive methods for detection of radiation exposure. The purpose of this study was to extend radiation metabolomic biomarker discovery to humans, as previous studies have focused on mice. Urine was collected from patients undergoing total body irradiation at Memorial Sloan-Kettering Cancer Center prior to hematopoietic stem cell transplantation at 4-6 h postirradiation (a single dose of 1.25 Gy) and 24 h (three fractions of 1.25 Gy each). Global metabolomic profiling was obtained through analysis with ultra performance liquid chromatography coupled to time-of-flight mass spectrometry (TOFMS). Prior to further analyses, each sample was normalized to its respective creatinine level. Statistical analysis was conducted by the nonparametric Kolmogorov-Smirnov test and the Fisher's exact test and markers were validated against pure standards. Seven markers showed distinct differences between pre- and post-exposure samples. Of those, trimethyl-l-lysine and the carnitine conjugates acetylcarnitine, decanoylcarnitine and octanoylcarnitine play an important role in the transportation of fatty acids across mitochondria for subsequent fatty acid β-oxidation. The remaining metabolites, hypoxanthine, xanthine and uric acid are the final products of the purine catabolism pathway, and high levels of excretion have been associated with increased oxidative stress and radiation induced DNA damage. Further analysis revealed sex differences in the patterns of excretion of the markers, demonstrating that generation of a sex-specific metabolomic signature will be informative and can provide a quick and reliable assessment of individuals in a radiological scenario. This is the first radiation metabolomics study in human urine laying the foundation for the use of metabolomics in biodosimetry and providing confidence in biomarker identification based on the overlap between animal models and humans.

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Year:  2014        PMID: 24673254      PMCID: PMC4071158          DOI: 10.1667/RR13567.1

Source DB:  PubMed          Journal:  Radiat Res        ISSN: 0033-7587            Impact factor:   2.841


  42 in total

Review 1.  Enzymology of the carnitine biosynthesis pathway.

Authors:  Karin Strijbis; Frédéric M Vaz; Ben Distel
Journal:  IUBMB Life       Date:  2010-05       Impact factor: 3.885

2.  Normalization strategies for metabonomic analysis of urine samples.

Authors:  Bethanne M Warrack; Serhiy Hnatyshyn; Karl-Heinz Ott; Michael D Reily; Mark Sanders; Haiying Zhang; Dieter M Drexler
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2009-01-14       Impact factor: 3.205

3.  Dealing with at-risk populations in radiological/nuclear emergencies.

Authors:  Diana Wilkinson
Journal:  Radiat Prot Dosimetry       Date:  2009-05-03       Impact factor: 0.972

4.  Radiation metabolomics. 3. Biomarker discovery in the urine of gamma-irradiated rats using a simplified metabolomics protocol of gas chromatography-mass spectrometry combined with random forests machine learning algorithm.

Authors:  Christian Lanz; Andrew D Patterson; Josef Slavík; Kristopher W Krausz; Monika Ledermann; Frank J Gonzalez; Jeffrey R Idle
Journal:  Radiat Res       Date:  2009-08       Impact factor: 2.841

5.  A method for quantitative acylcarnitine profiling in human skin fibroblasts using unlabelled palmitic acid: diagnosis of fatty acid oxidation disorders and differentiation between biochemical phenotypes of MCAD deficiency.

Authors:  Jürgen G Okun; Stefan Kölker; Andreas Schulze; Dirk Kohlmüller; Katharina Olgemöller; Martin Lindner; Georg F Hoffmann; Ronald J A Wanders; Ertan Mayatepek
Journal:  Biochim Biophys Acta       Date:  2002-10-10

6.  Normalization of urinary biomarkers to creatinine during changes in glomerular filtration rate.

Authors:  Sushrut S Waikar; Venkata S Sabbisetti; Joseph V Bonventre
Journal:  Kidney Int       Date:  2010-06-16       Impact factor: 10.612

7.  The urine proteome for radiation biodosimetry: effect of total body vs. local kidney irradiation.

Authors:  Mukut Sharma; Brian D Halligan; Bassam T Wakim; Virginia J Savin; Eric P Cohen; John E Moulder
Journal:  Health Phys       Date:  2010-02       Impact factor: 1.316

8.  Radiation metabolomics. 2. Dose- and time-dependent urinary excretion of deaminated purines and pyrimidines after sublethal gamma-radiation exposure in mice.

Authors:  John B Tyburski; Andrew D Patterson; Kristopher W Krausz; Josef Slavík; Albert J Fornace; Frank J Gonzalez; Jeffrey R Idle
Journal:  Radiat Res       Date:  2009-07       Impact factor: 2.841

9.  Determination of carnitine, its short chain acyl esters and metabolic precursors trimethyllysine and gamma-butyrobetaine by quasi-solid phase extraction and MS/MS detection.

Authors:  Frank Hirche; Maren Fischer; Janine Keller; Klaus Eder
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2009-05-29       Impact factor: 3.205

Review 10.  Radiation combined injury: overview of NIAID research.

Authors:  Andrea L DiCarlo; Narayani Ramakrishnan; Richard J Hatchett
Journal:  Health Phys       Date:  2010-06       Impact factor: 1.316

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  34 in total

1.  Rapid and High-Throughput Detection and Quantitation of Radiation Biomarkers in Human and Nonhuman Primates by Differential Mobility Spectrometry-Mass Spectrometry.

Authors:  Zhidan Chen; Stephen L Coy; Evan L Pannkuk; Evagelia C Laiakis; Adam B Hall; Albert J Fornace; Paul Vouros
Journal:  J Am Soc Mass Spectrom       Date:  2016-07-08       Impact factor: 3.109

2.  Differential Mobility Spectrometry-Mass Spectrometry (DMS-MS) in Radiation Biodosimetry: Rapid and High-Throughput Quantitation of Multiple Radiation Biomarkers in Nonhuman Primate Urine.

Authors:  Zhidan Chen; Stephen L Coy; Evan L Pannkuk; Evagelia C Laiakis; Albert J Fornace; Paul Vouros
Journal:  J Am Soc Mass Spectrom       Date:  2018-05-07       Impact factor: 3.109

3.  Mass Spectrometry Fingerprints of Small-Molecule Metabolites in Biofluids: Building a Spectral Library of Recurrent Spectra for Urine Analysis.

Authors:  Yamil Simón-Manso; Ramesh Marupaka; Xinjian Yan; Yuxue Liang; Kelly H Telu; Yuri Mirokhin; Stephen E Stein
Journal:  Anal Chem       Date:  2019-08-30       Impact factor: 6.986

Review 4.  Metabolomic applications in radiation biodosimetry: exploring radiation effects through small molecules.

Authors:  Evan L Pannkuk; Albert J Fornace; Evagelia C Laiakis
Journal:  Int J Radiat Biol       Date:  2017-01-12       Impact factor: 2.694

5.  Mice and the A-Bomb: Irradiation Systems for Realistic Exposure Scenarios.

Authors:  Guy Garty; Yanping Xu; Carl Elliston; Stephen A Marino; Gerhard Randers-Pehrson; David J Brenner
Journal:  Radiat Res       Date:  2017-02-17       Impact factor: 2.841

6.  Selective paired ion contrast analysis: a novel algorithm for analyzing postprocessed LC-MS metabolomics data possessing high experimental noise.

Authors:  Tytus D Mak; Evagelia C Laiakis; Maryam Goudarzi; Albert J Fornace
Journal:  Anal Chem       Date:  2015-02-26       Impact factor: 6.986

7.  A Serum Small Molecule Biosignature of Radiation Exposure from Total Body Irradiated Patients.

Authors:  Evagelia C Laiakis; Evan L Pannkuk; Siddheshwar Kisan Chauthe; Yi-Wen Wang; Ming Lian; Tytus D Mak; Christopher A Barker; Giuseppe Astarita; Albert J Fornace
Journal:  J Proteome Res       Date:  2017-08-31       Impact factor: 4.466

8.  Differential mobility spectrometry (DMS) reveals the elevation of urinary acetylcarnitine in non-human primates (NHPs) exposed to radiation.

Authors:  Nicholas B Vera; Zhidan Chen; Evan Pannkuk; Evagelia C Laiakis; Albert J Fornace; Derek M Erion; Stephen L Coy; Jeffrey A Pfefferkorn; Paul Vouros
Journal:  J Mass Spectrom       Date:  2018-07       Impact factor: 1.982

9.  Metabolomic profiling of urine samples from mice exposed to protons reveals radiation quality and dose specific differences.

Authors:  Evagelia C Laiakis; Daniela Trani; Bo-Hyun Moon; Steven J Strawn; Albert J Fornace
Journal:  Radiat Res       Date:  2015-03-13       Impact factor: 2.841

10.  Quantitation of Urinary Acylcarnitines by DMS-MS/MS Uncovers the Effects of Total Body Irradiation in Cancer Patients.

Authors:  Nicholas B Vera; Stephen L Coy; Evagelia C Laiakis; Albert J Fornace; Michelle Clasquin; Christopher A Barker; Jeffrey A Pfefferkorn; Paul Vouros
Journal:  J Am Soc Mass Spectrom       Date:  2020-01-28       Impact factor: 3.109

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