Literature DB >> 30833778

Potassium channel selectivity filter dynamics revealed by single-molecule FRET.

Shizhen Wang1,2, Sun-Joo Lee3, Grigory Maksaev3, Xin Fang3, Chong Zuo3, Colin G Nichols4.   

Abstract

Potassium (K) channels exhibit exquisite selectivity for conduction of K+ ions over other cations, particularly Na+. High-resolution structures reveal an archetypal selectivity filter (SF) conformation in which dehydrated K+ ions, but not Na+ ions, are perfectly coordinated. Using single-molecule FRET (smFRET), we show that the SF-forming loop (SF-loop) in KirBac1.1 transitions between constrained and dilated conformations as a function of ion concentration. The constrained conformation, essential for selective K+ permeability, is stabilized by K+ but not Na+ ions. Mutations that render channels nonselective result in dilated and dynamically unstable conformations, independent of the permeant ion. Further, while wild-type KirBac1.1 channels are K+ selective in physiological conditions, Na+ permeates in the absence of K+. Moreover, whereas K+ gradients preferentially support 86Rb+ fluxes, Na+ gradients preferentially support 22Na+ fluxes. This suggests differential ion selectivity in constrained versus dilated states, potentially providing a structural basis for this anomalous mole fraction effect.

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Year:  2019        PMID: 30833778      PMCID: PMC6430689          DOI: 10.1038/s41589-019-0240-7

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  49 in total

1.  Chemistry of ion coordination and hydration revealed by a K+ channel-Fab complex at 2.0 A resolution.

Authors:  Y Zhou; J H Morais-Cabral; A Kaufman; R MacKinnon
Journal:  Nature       Date:  2001-11-01       Impact factor: 49.962

2.  The occupancy of ions in the K+ selectivity filter: charge balance and coupling of ion binding to a protein conformational change underlie high conduction rates.

Authors:  Yufeng Zhou; Roderick MacKinnon
Journal:  J Mol Biol       Date:  2003-11-07       Impact factor: 5.469

Review 3.  Structural correlates of selectivity and inactivation in potassium channels.

Authors:  Jason G McCoy; Crina M Nimigean
Journal:  Biochim Biophys Acta       Date:  2011-09-16

4.  Single-molecule FRET with total internal reflection microscopy.

Authors:  Chirlmin Joo; Taekjip Ha
Journal:  Cold Spring Harb Protoc       Date:  2012-12-01

5.  Inverted allosteric coupling between activation and inactivation gates in K+ channels.

Authors:  Alain J Labro; D Marien Cortes; Cholpon Tilegenova; Luis G Cuello
Journal:  Proc Natl Acad Sci U S A       Date:  2018-05-07       Impact factor: 11.205

Review 6.  Ion channels and ion selectivity.

Authors:  Benoît Roux
Journal:  Essays Biochem       Date:  2017-05-09       Impact factor: 8.000

7.  Mechanism of rectification in inward-rectifier K+ channels.

Authors:  Donglin Guo; Yajamana Ramu; Angela M Klem; Zhe Lu
Journal:  J Gen Physiol       Date:  2003-03-17       Impact factor: 4.086

8.  Novel insights into K+ selectivity from high-resolution structures of an open K+ channel pore.

Authors:  Sheng Ye; Yang Li; Youxing Jiang
Journal:  Nat Struct Mol Biol       Date:  2010-08-01       Impact factor: 15.369

Review 9.  Structural studies of ion selectivity in tetrameric cation channels.

Authors:  Amer Alam; Youxing Jiang
Journal:  J Gen Physiol       Date:  2011-05       Impact factor: 4.086

10.  Structural dynamics of potassium-channel gating revealed by single-molecule FRET.

Authors:  Shizhen Wang; Reza Vafabakhsh; William F Borschel; Taekjip Ha; Colin G Nichols
Journal:  Nat Struct Mol Biol       Date:  2015-12-07       Impact factor: 15.369

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  11 in total

1.  Cholesterol inhibits human voltage-gated proton channel hHv1.

Authors:  Shuo Han; Xiang-Ping Chu; Ryan Goodson; Prae Gamel; Sophia Peng; Joshua Vance; Shizhen Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2022-08-29       Impact factor: 12.779

2.  Probing ion channel macromolecular interactions using fluorescence resonance energy transfer.

Authors:  Sharen Rivas; Khadija Hanif; Nourdine Chakouri; Manu Ben-Johny
Journal:  Methods Enzymol       Date:  2021-03-15       Impact factor: 1.600

Review 3.  Site-Directed Fluorescence Approaches for Dynamic Structural Biology of Membrane Peptides and Proteins.

Authors:  H Raghuraman; Satyaki Chatterjee; Anindita Das
Journal:  Front Mol Biosci       Date:  2019-09-25

4.  Conformational changes upon gating of KirBac1.1 into an open-activated state revealed by solid-state NMR and functional assays.

Authors:  Reza Amani; Collin G Borcik; Nazmul H Khan; Derek B Versteeg; Maryam Yekefallah; Hoa Q Do; Heather R Coats; Benjamin J Wylie
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-24       Impact factor: 11.205

5.  Atomistic basis of opening and conduction in mammalian inward rectifier potassium (Kir2.2) channels.

Authors:  Eva-Maria Zangerl-Plessl; Sun-Joo Lee; Grigory Maksaev; Harald Bernsteiner; Feifei Ren; Peng Yuan; Anna Stary-Weinzinger; Colin G Nichols
Journal:  J Gen Physiol       Date:  2020-01-06       Impact factor: 4.000

6.  Pore-forming transmembrane domains control ion selectivity and selectivity filter conformation in the KirBac1.1 potassium channel.

Authors:  Marcos Matamoros; Colin G Nichols
Journal:  J Gen Physiol       Date:  2021-05-03       Impact factor: 4.086

7.  A small molecule high throughput screening platform to profile conformational properties of nascent, ribosome-bound proteins.

Authors:  Hideki Shishido; Jae Seok Yoon; William R Skach
Journal:  Sci Rep       Date:  2022-02-15       Impact factor: 4.996

8.  Structural dynamics determine voltage and pH gating in human voltage-gated proton channel.

Authors:  Shuo Han; Sophia Peng; Joshua Vance; Kimberly Tran; Nhu Do; Nauy Bui; Zhenhua Gui; Shizhen Wang
Journal:  Elife       Date:  2022-03-04       Impact factor: 8.140

9.  An L-2-hydroxyglutarate biosensor based on specific transcriptional regulator LhgR.

Authors:  Zhaoqi Kang; Manman Zhang; Kaiyu Gao; Wen Zhang; Wensi Meng; Yidong Liu; Dan Xiao; Shiting Guo; Cuiqing Ma; Chao Gao; Ping Xu
Journal:  Nat Commun       Date:  2021-06-15       Impact factor: 14.919

Review 10.  Structural Plasticity of the Selectivity Filter in Cation Channels.

Authors:  Kitty Hendriks; Carl Öster; Adam Lange
Journal:  Front Physiol       Date:  2021-12-07       Impact factor: 4.566

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