Literature DB >> 30816949

Lack of Signal for the Impact of Conotoxin Gene Diversity on Speciation Rates in Cone Snails.

Mark A Phuong1, Michael E Alfaro1, Gusti N Mahardika2, Ristiyanti M Marwoto3, Romanus Edy Prabowo4, Thomas von Rintelen5, Philipp W H Vogt5, Jonathan R Hendricks6, Nicolas Puillandre7.   

Abstract

Understanding why some groups of organisms are more diverse than others is a central goal in macroevolution. Evolvability, or the intrinsic capacity of lineages for evolutionary change, is thought to influence disparities in species diversity across taxa. Over macroevolutionary time scales, clades that exhibit high evolvability are expected to have higher speciation rates. Cone snails (family: Conidae, $>$900 spp.) provide a unique opportunity to test this prediction because their toxin genes can be used to characterize differences in evolvability between clades. Cone snails are carnivorous, use prey-specific venom (conotoxins) to capture prey, and the genes that encode venom are known and diversify through gene duplication. Theory predicts that higher gene diversity confers a greater potential to generate novel phenotypes for specialization and adaptation. Therefore, if conotoxin gene diversity gives rise to varying levels of evolvability, conotoxin gene diversity should be coupled with macroevolutionary speciation rates. We applied exon capture techniques to recover phylogenetic markers and conotoxin loci across 314 species, the largest venom discovery effort in a single study. We paired a reconstructed timetree using 12 fossil calibrations with species-specific estimates of conotoxin gene diversity and used trait-dependent diversification methods to test the impact of evolvability on diversification patterns. Surprisingly, we did not detect any signal for the relationship between conotoxin gene diversity and speciation rates, suggesting that venom evolution may not be the rate-limiting factor controlling diversification dynamics in Conidae. Comparative analyses showed some signal for the impact of diet and larval dispersal strategy on diversification patterns, though detection of a signal depended on the dataset and the method. If our results remain true with increased taxonomic sampling in future studies, they suggest that the rapid evolution of conid venom may cause other factors to become more critical to diversification, such as ecological opportunity or traits that promote isolation among lineages.
© The Author(s) 2019. Published by Oxford University Press, on behalf of the Society of Systematic Biologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Keywords:  Macroevolution; phylogenetics; venom evolution

Mesh:

Substances:

Year:  2019        PMID: 30816949      PMCID: PMC6934442          DOI: 10.1093/sysbio/syz016

Source DB:  PubMed          Journal:  Syst Biol        ISSN: 1063-5157            Impact factor:   15.683


  74 in total

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Journal:  Gene       Date:  2000-12-30       Impact factor: 3.688

2.  Extensive and continuous duplication facilitates rapid evolution and diversification of gene families.

Authors:  Dan Chang; Thomas F Duda
Journal:  Mol Biol Evol       Date:  2012-02-15       Impact factor: 16.240

3.  Patterns of cladogenesis in the venomous marine gastropod genus Conus from the Cape Verde islands.

Authors:  Regina L Cunha; Rita Castilho; Lukas Rüber; Rafael Zardoya
Journal:  Syst Biol       Date:  2005-08       Impact factor: 15.683

4.  Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences.

Authors:  Weizhong Li; Adam Godzik
Journal:  Bioinformatics       Date:  2006-05-26       Impact factor: 6.937

Review 5.  The locus of evolution: evo devo and the genetics of adaptation.

Authors:  Hopi E Hoekstra; Jerry A Coyne
Journal:  Evolution       Date:  2007-05       Impact factor: 3.694

6.  Rates of speciation and morphological evolution are correlated across the largest vertebrate radiation.

Authors:  Daniel L Rabosky; Francesco Santini; Jonathan Eastman; Stephen A Smith; Brian Sidlauskas; Jonathan Chang; Michael E Alfaro
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

7.  BAMM gives misleading rate estimates in simulated and empirical datasets.

Authors:  Andreas L S Meyer; Cristian Román-Palacios; John J Wiens
Journal:  Evolution       Date:  2018-09-10       Impact factor: 3.694

8.  Comparative analysis reveals that polyploidy does not decelerate diversification in fish.

Authors:  S H Zhan; L Glick; C S Tsigenopoulos; S P Otto; I Mayrose
Journal:  J Evol Biol       Date:  2014-01-13       Impact factor: 2.411

9.  Targeted Sequencing of Venom Genes from Cone Snail Genomes Improves Understanding of Conotoxin Molecular Evolution.

Authors:  Mark A Phuong; Gusti N Mahardika
Journal:  Mol Biol Evol       Date:  2018-05-01       Impact factor: 16.240

10.  Phylogenetic relationships of cone snails endemic to Cabo Verde based on mitochondrial genomes.

Authors:  Samuel Abalde; Manuel J Tenorio; Carlos M L Afonso; Juan E Uribe; Ana M Echeverry; Rafael Zardoya
Journal:  BMC Evol Biol       Date:  2017-11-25       Impact factor: 3.260

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  6 in total

1.  Conotoxin Diversity in the Venom Gland Transcriptome of the Magician's Cone, Pionoconus magus.

Authors:  José R Pardos-Blas; Iker Irisarri; Samuel Abalde; Manuel J Tenorio; Rafael Zardoya
Journal:  Mar Drugs       Date:  2019-09-27       Impact factor: 5.118

2.  Selecting Potential Neuronal Drug Leads from Conotoxins of Various Venomous Marine Cone Snails in Bali, Indonesia.

Authors:  Anak A R Sudewi; Ni M Susilawathi; Bayu K Mahardika; Agung N Mahendra; Made Pharmawati; Mark A Phuong; Gusti N Mahardika
Journal:  ACS Omega       Date:  2019-11-06

3.  Reconstructing the Origins of the Somatostatin and Allatostatin-C Signaling Systems Using the Accelerated Evolution of Biodiverse Cone Snail Toxins.

Authors:  Thomas Lund Koch; Iris Bea L Ramiro; Paula Flórez Salcedo; Ebbe Engholm; Knud Jørgen Jensen; Kevin Chase; Baldomero M Olivera; Walden Emil Bjørn-Yoshimoto; Helena Safavi-Hemami
Journal:  Mol Biol Evol       Date:  2022-04-10       Impact factor: 8.800

4.  A phylogeny-aware approach reveals unexpected venom components in divergent lineages of cone snails.

Authors:  Alexander Fedosov; Paul Zaharias; Nicolas Puillandre
Journal:  Proc Biol Sci       Date:  2021-07-07       Impact factor: 5.530

5.  Venom Diversity and Evolution in the Most Divergent Cone Snail Genus Profundiconus.

Authors:  Giulia Fassio; Maria Vittoria Modica; Lou Mary; Paul Zaharias; Alexander E Fedosov; Juliette Gorson; Yuri I Kantor; Mandё Holford; Nicolas Puillandre
Journal:  Toxins (Basel)       Date:  2019-10-28       Impact factor: 4.546

6.  Transcriptomic Profiling Reveals Extraordinary Diversity of Venom Peptides in Unexplored Predatory Gastropods of the Genus Clavus.

Authors:  Aiping Lu; Maren Watkins; Qing Li; Samuel D Robinson; Gisela P Concepcion; Mark Yandell; Zhiping Weng; Baldomero M Olivera; Helena Safavi-Hemami; Alexander E Fedosov
Journal:  Genome Biol Evol       Date:  2020-05-01       Impact factor: 4.065

  6 in total

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