Literature DB >> 30808574

Exploration, Inference, and Prediction in Neuroscience and Biomedicine.

Danilo Bzdok1, John P A Ioannidis2.   

Abstract

Recent decades have seen dramatic progress in brain research. These advances were often buttressed by probing single variables to make circumscribed discoveries, typically through null hypothesis significance testing. New ways for generating massive data fueled tension between the traditional methodology that is used to infer statistically relevant effects in carefully chosen variables, and pattern-learning algorithms that are used to identify predictive signatures by searching through abundant information. In this article we detail the antagonistic philosophies behind two quantitative approaches: certifying robust effects in understandable variables, and evaluating how accurately a built model can forecast future outcomes. We discourage choosing analytical tools via categories such as 'statistics' or 'machine learning'. Instead, to establish reproducible knowledge about the brain, we advocate prioritizing tools in view of the core motivation of each quantitative analysis: aiming towards mechanistic insight or optimizing predictive accuracy.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  big-data analytics; black box models; data science; deep learning; precision medicine; reproducibility

Mesh:

Year:  2019        PMID: 30808574     DOI: 10.1016/j.tins.2019.02.001

Source DB:  PubMed          Journal:  Trends Neurosci        ISSN: 0166-2236            Impact factor:   13.837


  42 in total

1.  Towards Algorithmic Analytics for Large-scale Datasets.

Authors:  Danilo Bzdok; Thomas E Nichols; Stephen M Smith
Journal:  Nat Mach Intell       Date:  2019-07-09

2.  Combining magnetoencephalography with magnetic resonance imaging enhances learning of surrogate-biomarkers.

Authors:  Denis A Engemann; Oleh Kozynets; David Sabbagh; Guillaume Lemaître; Gael Varoquaux; Franziskus Liem; Alexandre Gramfort
Journal:  Elife       Date:  2020-05-19       Impact factor: 8.140

3.  Brain-based ranking of cognitive domains to predict schizophrenia.

Authors:  Teresa M Karrer; Danielle S Bassett; Birgit Derntl; Oliver Gruber; André Aleman; Renaud Jardri; Angela R Laird; Peter T Fox; Simon B Eickhoff; Olivier Grisel; Gaël Varoquaux; Bertrand Thirion; Danilo Bzdok
Journal:  Hum Brain Mapp       Date:  2019-07-16       Impact factor: 5.038

4.  Machine learning predicts clinically significant health related quality of life improvement after sensorimotor rehabilitation interventions in chronic stroke.

Authors:  Wan-Wen Liao; Yu-Wei Hsieh; Tsong-Hai Lee; Chia-Ling Chen; Ching-Yi Wu
Journal:  Sci Rep       Date:  2022-07-04       Impact factor: 4.996

5.  Functional brain activity constrained by structural connectivity reveals cohort-specific features for serum neurofilament light chain.

Authors:  Saurabh Sihag; Sébastien Naze; Foad Taghdiri; Melisa Gumus; Charles Tator; Robin Green; Brenda Colella; Kaj Blennow; Henrik Zetterberg; Luis Garcia Dominguez; Richard Wennberg; David J Mikulis; Maria C Tartaglia; James R Kozloski
Journal:  Commun Med (Lond)       Date:  2022-01-17

Review 6.  Machine Learning With Neuroimaging: Evaluating Its Applications in Psychiatry.

Authors:  Ashley N Nielsen; Deanna M Barch; Steven E Petersen; Bradley L Schlaggar; Deanna J Greene
Journal:  Biol Psychiatry Cogn Neurosci Neuroimaging       Date:  2019-11-27

7.  Distributed functional connectivity predicts neuropsychological test performance among older adults.

Authors:  Seyul Kwak; Hairin Kim; Hoyoung Kim; Yoosik Youm; Jeanyung Chey
Journal:  Hum Brain Mapp       Date:  2021-05-07       Impact factor: 5.038

Review 8.  [The predictable human : Possibilities and risks of AI-based prediction of cognitive abilities, personality traits and mental illnesses].

Authors:  Simon B Eickhoff; Bert Heinrichs
Journal:  Nervenarzt       Date:  2021-10-04       Impact factor: 1.214

Review 9.  Artificial Intelligence for Mental Health Care: Clinical Applications, Barriers, Facilitators, and Artificial Wisdom.

Authors:  Ellen E Lee; John Torous; Munmun De Choudhury; Colin A Depp; Sarah A Graham; Ho-Cheol Kim; Martin P Paulus; John H Krystal; Dilip V Jeste
Journal:  Biol Psychiatry Cogn Neurosci Neuroimaging       Date:  2021-02-08

10.  Generative lesion pattern decomposition of cognitive impairment after stroke.

Authors:  Anna K Bonkhoff; Jae-Sung Lim; Hee-Joon Bae; Nick A Weaver; Hugo J Kuijf; J Matthijs Biesbroek; Natalia S Rost; Danilo Bzdok
Journal:  Brain Commun       Date:  2021-05-22
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