Literature DB >> 32423528

Combining magnetoencephalography with magnetic resonance imaging enhances learning of surrogate-biomarkers.

Denis A Engemann1,2, Oleh Kozynets1, David Sabbagh1,3,4, Guillaume Lemaître1, Gael Varoquaux1, Franziskus Liem5, Alexandre Gramfort1.   

Abstract

Electrophysiological methods, that is M/EEG, provide unique views into brain health. Yet, when building predictive models from brain data, it is often unclear how electrophysiology should be combined with other neuroimaging methods. Information can be redundant, useful common representations of multimodal data may not be obvious and multimodal data collection can be medically contraindicated, which reduces applicability. Here, we propose a multimodal model to robustly combine MEG, MRI and fMRI for prediction. We focus on age prediction as a surrogate biomarker in 674 subjects from the Cam-CAN dataset. Strikingly, MEG, fMRI and MRI showed additive effects supporting distinct brain-behavior associations. Moreover, the contribution of MEG was best explained by cortical power spectra between 8 and 30 Hz. Finally, we demonstrate that the model preserves benefits of stacking when some data is missing. The proposed framework, hence, enables multimodal learning for a wide range of biomarkers from diverse types of brain signals.
© 2020, Engemann et al.

Entities:  

Keywords:  aging; biomarker; human; human biology; machine learning; magnetic resonance imaging; magnetoencephalogrphy; medicine; neuroscience; oscillations

Mesh:

Year:  2020        PMID: 32423528      PMCID: PMC7308092          DOI: 10.7554/eLife.54055

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.140


  94 in total

1.  The unity and diversity of executive functions and their contributions to complex "Frontal Lobe" tasks: a latent variable analysis.

Authors:  A Miyake; N P Friedman; M J Emerson; A H Witzki; A Howerter; T D Wager
Journal:  Cogn Psychol       Date:  2000-08       Impact factor: 3.468

2.  Age-Related Changes in 1/f Neural Electrophysiological Noise.

Authors:  Bradley Voytek; Mark A Kramer; John Case; Kyle Q Lepage; Zechari R Tempesta; Robert T Knight; Adam Gazzaley
Journal:  J Neurosci       Date:  2015-09-23       Impact factor: 6.167

3.  Benchmarking functional connectome-based predictive models for resting-state fMRI.

Authors:  Kamalaker Dadi; Mehdi Rahim; Alexandre Abraham; Darya Chyzhyk; Michael Milham; Bertrand Thirion; Gaël Varoquaux
Journal:  Neuroimage       Date:  2019-03-02       Impact factor: 6.556

4.  Brain-based ranking of cognitive domains to predict schizophrenia.

Authors:  Teresa M Karrer; Danielle S Bassett; Birgit Derntl; Oliver Gruber; André Aleman; Renaud Jardri; Angela R Laird; Peter T Fox; Simon B Eickhoff; Olivier Grisel; Gaël Varoquaux; Bertrand Thirion; Danilo Bzdok
Journal:  Hum Brain Mapp       Date:  2019-07-16       Impact factor: 5.038

5.  Prediction of individual brain maturity using fMRI.

Authors:  Nico U F Dosenbach; Binyam Nardos; Alexander L Cohen; Damien A Fair; Jonathan D Power; Jessica A Church; Steven M Nelson; Gagan S Wig; Alecia C Vogel; Christina N Lessov-Schlaggar; Kelly Anne Barnes; Joseph W Dubis; Eric Feczko; Rebecca S Coalson; John R Pruett; Deanna M Barch; Steven E Petersen; Bradley L Schlaggar
Journal:  Science       Date:  2010-09-10       Impact factor: 47.728

Review 6.  Building better biomarkers: brain models in translational neuroimaging.

Authors:  Choong-Wan Woo; Luke J Chang; Martin A Lindquist; Tor D Wager
Journal:  Nat Neurosci       Date:  2017-02-23       Impact factor: 24.884

7.  Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in python.

Authors:  Krzysztof Gorgolewski; Christopher D Burns; Cindee Madison; Dav Clark; Yaroslav O Halchenko; Michael L Waskom; Satrajit S Ghosh
Journal:  Front Neuroinform       Date:  2011-08-22       Impact factor: 4.081

8.  An R package for analyzing and modeling ranking data.

Authors:  Paul H Lee; Philip L H Yu
Journal:  BMC Med Res Methodol       Date:  2013-05-14       Impact factor: 4.615

9.  Fast transient networks in spontaneous human brain activity.

Authors:  Adam P Baker; Matthew J Brookes; Iead A Rezek; Stephen M Smith; Timothy Behrens; Penny J Probert Smith; Mark Woolrich
Journal:  Elife       Date:  2014-03-25       Impact factor: 8.140

10.  Obesity associated with increased brain age from midlife.

Authors:  Lisa Ronan; Aaron F Alexander-Bloch; Konrad Wagstyl; Sadaf Farooqi; Carol Brayne; Lorraine K Tyler; Paul C Fletcher
Journal:  Neurobiol Aging       Date:  2016-07-27       Impact factor: 4.673

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  14 in total

1.  Connectomics of human electrophysiology.

Authors:  Sepideh Sadaghiani; Matthew J Brookes; Sylvain Baillet
Journal:  Neuroimage       Date:  2021-12-12       Impact factor: 6.556

2.  Population modeling with machine learning can enhance measures of mental health.

Authors:  Kamalaker Dadi; Gaël Varoquaux; Josselin Houenou; Danilo Bzdok; Bertrand Thirion; Denis Engemann
Journal:  Gigascience       Date:  2021-10-13       Impact factor: 6.524

3.  Predicting brain age from functional connectivity in symptomatic and preclinical Alzheimer disease.

Authors:  Peter R Millar; Patrick H Luckett; Brian A Gordon; Tammie L S Benzinger; Suzanne E Schindler; Anne M Fagan; Carlos Cruchaga; Randall J Bateman; Ricardo Allegri; Mathias Jucker; Jae-Hong Lee; Hiroshi Mori; Stephen P Salloway; Igor Yakushev; John C Morris; Beau M Ances
Journal:  Neuroimage       Date:  2022-04-20       Impact factor: 7.400

4.  How to remove or control confounds in predictive models, with applications to brain biomarkers.

Authors:  Darya Chyzhyk; Gaël Varoquaux; Michael Milham; Bertrand Thirion
Journal:  Gigascience       Date:  2022-03-12       Impact factor: 6.524

5.  Ensemble Learning of Convolutional Neural Network, Support Vector Machine, and Best Linear Unbiased Predictor for Brain Age Prediction: ARAMIS Contribution to the Predictive Analytics Competition 2019 Challenge.

Authors:  Baptiste Couvy-Duchesne; Johann Faouzi; Benoît Martin; Elina Thibeau-Sutre; Adam Wild; Manon Ansart; Stanley Durrleman; Didier Dormont; Ninon Burgos; Olivier Colliot
Journal:  Front Psychiatry       Date:  2020-12-15       Impact factor: 4.157

6.  Multimodal imaging improves brain age prediction and reveals distinct abnormalities in patients with psychiatric and neurological disorders.

Authors:  Jaroslav Rokicki; Thomas Wolfers; Wibeke Nordhøy; Natalia Tesli; Daniel S Quintana; Dag Alnaes; Genevieve Richard; Ann-Marie G de Lange; Martina J Lund; Linn Norbom; Ingrid Agartz; Ingrid Melle; Terje Naerland; Geir Selbaek; Karin Persson; Jan Egil Nordvik; Emanuel Schwarz; Ole A Andreassen; Tobias Kaufmann; Lars T Westlye
Journal:  Hum Brain Mapp       Date:  2020-12-19       Impact factor: 5.038

7.  Propofol Requirement and EEG Alpha Band Power During General Anesthesia Provide Complementary Views on Preoperative Cognitive Decline.

Authors:  Cyril Touchard; Jérôme Cartailler; Charlotte Levé; José Serrano; David Sabbagh; Elsa Manquat; Jona Joachim; Joaquim Mateo; Etienne Gayat; Denis Engemann; Fabrice Vallée
Journal:  Front Aging Neurosci       Date:  2020-11-27       Impact factor: 5.750

8.  Late combination shows that MEG adds to MRI in classifying MCI versus controls.

Authors:  Delshad Vaghari; Ehsanollah Kabir; Richard N Henson
Journal:  Neuroimage       Date:  2022-03-03       Impact factor: 7.400

9.  What Can Glioma Patients Teach Us about Language (Re)Organization in the Bilingual Brain: Evidence from fMRI and MEG.

Authors:  Ileana Quiñones; Lucia Amoruso; Iñigo Cristobal Pomposo Gastelu; Santiago Gil-Robles; Manuel Carreiras
Journal:  Cancers (Basel)       Date:  2021-05-25       Impact factor: 6.639

10.  Epigenetic regulation of the lineage specificity of primary human dermal lymphatic and blood vascular endothelial cells.

Authors:  Carlotta Tacconi; Yuliang He; Luca Ducoli; Michael Detmar
Journal:  Angiogenesis       Date:  2020-09-12       Impact factor: 10.658

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