| Literature DB >> 30781467 |
Leelatulasi Salwoom1,2, Raja Noor Zaliha Raja Abd Rahman3,4, Abu Bakar Salleh5, Fairolniza Mohd Shariff6,7, Peter Convey8, David Pearce9,10, Mohd Shukuri Mohamad Ali11,12.
Abstract
In recent years, studies on psychrophilic lipases have been an emerging area of research in the field of enzymology. This study focuses on bacterial strains isolated from anthropogenically-influenced soil samples collected around Signy Island Research Station (South Orkney Islands, maritime Antarctic). Limited information on lipase activities from bacteria isolated from Signy station is currently available. The presence of lipase genes was determined using real time quantification PCR (qPCR) in samples obtained from three different locations on Signy Island. Twenty strains from the location with highest lipase gene detection were screened for lipolytic activities at a temperature of 4 °C, and from this one strain was selected for further examination based on the highest enzymatic activities obtained. Analysis of 16S rRNA sequence data of this strain showed the highest level of sequence similarity (98%) to a Pseudomonas sp. strain also isolated from Antarctica. In order to increase lipase production of this psychrophilic strain, optimisation of different parameters of physical and nutritional factors were investigated. Optimal production was obtained at 10 °C and pH 7.0, at 150 rev/min shaking rate over 36 h incubation.Entities:
Keywords: Antarctica; Pseudomonas sp. LSK25; cold adapted lipase; lipase production
Mesh:
Substances:
Year: 2019 PMID: 30781467 PMCID: PMC6413188 DOI: 10.3390/molecules24040715
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1(a) Lipolytic activity clearing zone on tributyrin agar; (b) lipolytic activity on Rhodamine B, with substrate hydrolysis leading to the formation of an orange fluorescent halo upon exposure to UV radiation; and (c) lipolytic activity confirmation due to change in () colour of dye indicators on triolein agar.
Figure 2Lipase activity of 11 isolates that tested positive in qualitative analysis. Lipase activities are represented by mean value ± standard deviation (n = 3).
Lipase gene copy quantification using qPCR.
| Isolates | Lipase Gene Copy Numbers (n = 3) | s.d. (±) |
|---|---|---|
| LSK14 | 1.02 × 1010 | 0.16 |
| LSK25 | 2.45 × 1014 | 0.11 |
| CF1 | 6.35 × 108 | 0.12 |
| BP1 | 3.04 × 1010 | 0.11 |
Figure 3Unrooted Neighbour Joining tree illustrating the relationship of strain Pseudomonas sp. LSK25 () with other Pseudomonas sp. strains obtained from the polar regions.
Figure 4Lipase activities represented by mean value ± standard deviation (n = 3). (a) Effect of temperature on lipase activity of strain of LSK25 measured at 4–37 °C. (b) Effect of incubation time on activity of lipase in strain LSK25 over 12 h intervals. (c) Effect of pH of production medium on lipase activity in strain LSK25 over a pH range of 4 to 9. (d) Effect of agitation of production medium on lipase activity in strain LSK25, over the range 0 to 200 rpm.
Figure 5Lipase activities represented by mean value ± standard deviation (n = 3). (a) Influence of carbon source on lipase activity of strain LSK25. Carbon sources were added to the media to a final concentration of 1% (w/v). (b) Influence of nitrogen source on lipase activity of strain LSK25. The nitrogen sources were added to a final concentration of 0.8% (w/v). (c) Influence of various metal ions on lipase activity of strain LSK25. The metal ions in nitrate form were added to a final concentration of 1 mM. (d) Influence of various natural triglycerides on lipase activity of strain LSK25. Olive oil in production medium was substituted with the other substrates to a concentration of 1% (v/v) (PM = Production medium).
The study sites sampled on Signy Island.
| Sampling Sites | Description | Location |
|---|---|---|
| Area surrounding Signy Station | Around the station living quarters, with high human activity, old whaling station | 60°42′56”S |
| Bernsten Point | Site of previous Signy station buildings, historical oil spillages | 60°40′16”S |
| Cemetery flats | Site of historical whaling industry activity, including oil spills and other pollution | 60°41′16”S |