Literature DB >> 30773605

Mendelian Randomization and the Environmental Epigenetics of Health: a Systematic Review.

Maria Grau-Perez1,2,3, Golareh Agha4, Yuanjie Pang5, Jose D Bermudez6, Maria Tellez-Plaza7,8,9.   

Abstract

PURPOSE OF REVIEW: Epigenetic modifications are environmentally responsive and may play a mechanistic role in the development of disease. Mendelian randomization uses genetic variation to assess the causal effect of modifiable exposures on health outcomes. We conducted a systematic review of Mendelian randomization studies evaluating the causal role of DNA methylation (DNAm) changes on the development of health states, emphasizing on studies that formally evaluate exposure-DNAm, in addition to DNAm-outcome, causal associations. RECENT
FINDINGS: We identified 15 articles, 4 of them including an environmental determinant of DNAm, including self-reported tobacco smoke exposure, in utero tobacco smoke exposure, measured vitamin B12, and glycemia. Selected articles suggest a causal association of DNAm with some cardiometabolic endpoints. DNAm seemed to partly explain the association of postnatal and prenatal exposure to tobacco smoke and vitamin B12 with inflammation biomarkers, birth weight, and cognitive outcomes, respectively. However, the current evidence is not sufficient to infer causality. Additional Mendelian randomization studies from large epidemiologic samples are needed to support the causal role of environmental factors as determinants of health-related epigenetic modifications.

Entities:  

Keywords:  DNA methylation; Environmental; Health outcomes; Mendelian randomization; Systematic review

Mesh:

Substances:

Year:  2019        PMID: 30773605     DOI: 10.1007/s40572-019-0226-3

Source DB:  PubMed          Journal:  Curr Environ Health Rep        ISSN: 2196-5412


  63 in total

1.  Two-step epigenetic Mendelian randomization: a strategy for establishing the causal role of epigenetic processes in pathways to disease.

Authors:  Caroline L Relton; George Davey Smith
Journal:  Int J Epidemiol       Date:  2012-02       Impact factor: 7.196

Review 2.  Mendelian randomization studies: a review of the approaches used and the quality of reporting.

Authors:  Anna G C Boef; Olaf M Dekkers; Saskia le Cessie
Journal:  Int J Epidemiol       Date:  2015-05-06       Impact factor: 7.196

3.  Genetically elevated C-reactive protein and ischemic vascular disease.

Authors:  James K Liao
Journal:  Curr Atheroscler Rep       Date:  2009-07       Impact factor: 5.113

Review 4.  Tackling the widespread and critical impact of batch effects in high-throughput data.

Authors:  Jeffrey T Leek; Robert B Scharpf; Héctor Corrada Bravo; David Simcha; Benjamin Langmead; W Evan Johnson; Donald Geman; Keith Baggerly; Rafael A Irizarry
Journal:  Nat Rev Genet       Date:  2010-09-14       Impact factor: 53.242

5.  Epigenetic Signatures of Cigarette Smoking.

Authors:  Roby Joehanes; Allan C Just; Riccardo E Marioni; Luke C Pilling; Lindsay M Reynolds; Pooja R Mandaviya; Weihua Guan; Tao Xu; Cathy E Elks; Stella Aslibekyan; Hortensia Moreno-Macias; Jennifer A Smith; Jennifer A Brody; Radhika Dhingra; Paul Yousefi; James S Pankow; Sonja Kunze; Sonia H Shah; Allan F McRae; Kurt Lohman; Jin Sha; Devin M Absher; Luigi Ferrucci; Wei Zhao; Ellen W Demerath; Jan Bressler; Megan L Grove; Tianxiao Huan; Chunyu Liu; Michael M Mendelson; Chen Yao; Douglas P Kiel; Annette Peters; Rui Wang-Sattler; Peter M Visscher; Naomi R Wray; John M Starr; Jingzhong Ding; Carlos J Rodriguez; Nicholas J Wareham; Marguerite R Irvin; Degui Zhi; Myrto Barrdahl; Paolo Vineis; Srikant Ambatipudi; André G Uitterlinden; Albert Hofman; Joel Schwartz; Elena Colicino; Lifang Hou; Pantel S Vokonas; Dena G Hernandez; Andrew B Singleton; Stefania Bandinelli; Stephen T Turner; Erin B Ware; Alicia K Smith; Torsten Klengel; Elisabeth B Binder; Bruce M Psaty; Kent D Taylor; Sina A Gharib; Brenton R Swenson; Liming Liang; Dawn L DeMeo; George T O'Connor; Zdenko Herceg; Kerry J Ressler; Karen N Conneely; Nona Sotoodehnia; Sharon L R Kardia; David Melzer; Andrea A Baccarelli; Joyce B J van Meurs; Isabelle Romieu; Donna K Arnett; Ken K Ong; Yongmei Liu; Melanie Waldenberger; Ian J Deary; Myriam Fornage; Daniel Levy; Stephanie J London
Journal:  Circ Cardiovasc Genet       Date:  2016-09-20

Review 6.  Mendelian randomization: genetic anchors for causal inference in epidemiological studies.

Authors:  George Davey Smith; Gibran Hemani
Journal:  Hum Mol Genet       Date:  2014-07-04       Impact factor: 6.150

7.  DNA Methylation and BMI: Investigating Identified Methylation Sites at HIF3A in a Causal Framework.

Authors:  Rebecca C Richmond; Gemma C Sharp; Mary E Ward; Abigail Fraser; Oliver Lyttleton; Wendy L McArdle; Susan M Ring; Tom R Gaunt; Debbie A Lawlor; George Davey Smith; Caroline L Relton
Journal:  Diabetes       Date:  2016-02-09       Impact factor: 9.461

8.  Pleiotropic Effects of Trait-Associated Genetic Variation on DNA Methylation: Utility for Refining GWAS Loci.

Authors:  Eilis Hannon; Mike Weedon; Nicholas Bray; Michael O'Donovan; Jonathan Mill
Journal:  Am J Hum Genet       Date:  2017-05-18       Impact factor: 11.025

9.  Mendelian randomization: applications and limitations in epigenetic studies.

Authors:  Caroline L Relton; George Davey Smith
Journal:  Epigenomics       Date:  2015-12-07       Impact factor: 4.778

10.  DNA methylation arrays as surrogate measures of cell mixture distribution.

Authors:  Eugene Andres Houseman; William P Accomando; Devin C Koestler; Brock C Christensen; Carmen J Marsit; Heather H Nelson; John K Wiencke; Karl T Kelsey
Journal:  BMC Bioinformatics       Date:  2012-05-08       Impact factor: 3.169

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  2 in total

Review 1.  CpG and Non-CpG Methylation in the Diet-Epigenetics-Neurodegeneration Connection.

Authors:  Andrea Fuso; Marco Lucarelli
Journal:  Curr Nutr Rep       Date:  2019-06

Review 2.  Gene-environment interactions in Alzheimer disease: the emerging role of epigenetics.

Authors:  Lucia Migliore; Fabio Coppedè
Journal:  Nat Rev Neurol       Date:  2022-09-30       Impact factor: 44.711

  2 in total

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