Literature DB >> 30887425

CpG and Non-CpG Methylation in the Diet-Epigenetics-Neurodegeneration Connection.

Andrea Fuso1,2, Marco Lucarelli3,4.   

Abstract

PURPOSE OF REVIEW: Unraveling the diet-epigenetics-neurodegeneration connection may disclose associated mechanisms and novel approaches to the neurodegenerative diseases. This review summarizes the basic concepts and the innovative results in this field focusing on the relevance of non-CpG methylation. RECENT
FINDINGS: Many multifactorial neurodegenerative diseases are associated with epigenetic changes, and the brain seems more prone to epigenetic changes than other tissues. Several environmental factors induce epigenetic modulation in the organisms: diet and nutrition retain a high capacity to modulate the epigenetic traits. Finally, unexpected, specific, and functional non-CpG methylation in the brain was identified. Non-CpG methylation modulates brain expression of genes especially in promoters characterized by low-density CpGs distribution. These genes appear more prone to the epigenetic effect of environmental factors, i.e., diet, possibly inducing neurodegenerative processes. Understanding these processes could help in setting nutritional intervention aimed at contrasting neurodegenerative diseases.

Entities:  

Keywords:  B vitamins; DNA methylation; Diet; Environmental epigenetics; Non-CpG methylation; One-carbon metabolism

Year:  2019        PMID: 30887425     DOI: 10.1007/s13668-019-0266-1

Source DB:  PubMed          Journal:  Curr Nutr Rep        ISSN: 2161-3311


  106 in total

Review 1.  Epigenetics and DNA methylation come of age in toxicology.

Authors:  Rebecca E Watson; Jay I Goodman
Journal:  Toxicol Sci       Date:  2002-05       Impact factor: 4.849

2.  Early demethylation of non-CpG, CpC-rich, elements in the myogenin 5'-flanking region: a priming effect on the spreading of active demethylation.

Authors:  Andrea Fuso; Giampiero Ferraguti; Francesco Grandoni; Raffaella Ruggeri; Sigfrido Scarpa; Roberto Strom; Marco Lucarelli
Journal:  Cell Cycle       Date:  2010-10-29       Impact factor: 4.534

Review 3.  Diet, the gut microbiome, and epigenetics.

Authors:  Meredith A J Hullar; Benjamin C Fu
Journal:  Cancer J       Date:  2014 May-Jun       Impact factor: 3.360

Review 4.  Recent Findings in Alzheimer Disease and Nutrition Focusing on Epigenetics.

Authors:  Dimitrios Athanasopoulos; George Karagiannis; Magda Tsolaki
Journal:  Adv Nutr       Date:  2016-09-15       Impact factor: 8.701

Review 5.  TET-mediated active DNA demethylation: mechanism, function and beyond.

Authors:  Xiaoji Wu; Yi Zhang
Journal:  Nat Rev Genet       Date:  2017-05-30       Impact factor: 53.242

6.  Neuronal brain-region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability.

Authors:  Lindsay F Rizzardi; Peter F Hickey; Varenka Rodriguez DiBlasi; Rakel Tryggvadóttir; Colin M Callahan; Adrian Idrizi; Kasper D Hansen; Andrew P Feinberg
Journal:  Nat Neurosci       Date:  2019-01-14       Impact factor: 24.884

7.  Epigenetics, Darwin, and Lamarck.

Authors:  David Penny
Journal:  Genome Biol Evol       Date:  2015-05-29       Impact factor: 3.416

8.  Maternal nutrition at conception modulates DNA methylation of human metastable epialleles.

Authors:  Paula Dominguez-Salas; Sophie E Moore; Maria S Baker; Andrew W Bergen; Sharon E Cox; Roger A Dyer; Anthony J Fulford; Yongtao Guan; Eleonora Laritsky; Matt J Silver; Gary E Swan; Steven H Zeisel; Sheila M Innis; Robert A Waterland; Andrew M Prentice; Branwen J Hennig
Journal:  Nat Commun       Date:  2014-04-29       Impact factor: 14.919

9.  Genistein Prevents BRCA1 CpG Methylation and Proliferation in Human Breast Cancer Cells with Activated Aromatic Hydrocarbon Receptor.

Authors:  Donato F Romagnolo; Micah G Donovan; Andreas J Papoutsis; Tom C Doetschman; Ornella I Selmin
Journal:  Curr Dev Nutr       Date:  2017-05-19

10.  DNA methylation landscape of the genes regulating D-serine and D-aspartate metabolism in post-mortem brain from controls and subjects with schizophrenia.

Authors:  Simona Keller; Daniela Punzo; Mariella Cuomo; Ornella Affinito; Lorena Coretti; Silvia Sacchi; Ermanno Florio; Francesca Lembo; Massimo Carella; Massimiliano Copetti; Sergio Cocozza; Darrick T Balu; Francesco Errico; Alessandro Usiello; Lorenzo Chiariotti
Journal:  Sci Rep       Date:  2018-07-05       Impact factor: 4.379

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  7 in total

1.  Human non-CpG methylation patterns display both tissue-specific and inter-individual differences suggestive of underlying function.

Authors:  Philip Titcombe; Robert Murray; Matthew Hewitt; Elie Antoun; Cyrus Cooper; Hazel M Inskip; Joanna D Holbrook; Keith M Godfrey; Karen Lillycrop; Mark Hanson; Sheila J Barton
Journal:  Epigenetics       Date:  2021-08-30       Impact factor: 4.861

Review 2.  Functional Foods: An Approach to Modulate Molecular Mechanisms of Alzheimer's Disease.

Authors:  Anna Atlante; Giuseppina Amadoro; Antonella Bobba; Valentina Latina
Journal:  Cells       Date:  2020-10-23       Impact factor: 6.600

3.  Active Demethylation of Non-CpG Moieties in Animals: A Neglected Research Area.

Authors:  Marco Lucarelli; Giampiero Ferraguti; Andrea Fuso
Journal:  Int J Mol Sci       Date:  2019-12-12       Impact factor: 5.923

Review 4.  Epigenetic Alterations in Inborn Errors of Immunity.

Authors:  Roberta Romano; Francesca Cillo; Cristina Moracas; Laura Pignata; Chiara Nannola; Elisabetta Toriello; Antonio De Rosa; Emilia Cirillo; Emma Coppola; Giuliana Giardino; Nicola Brunetti-Pierri; Andrea Riccio; Claudio Pignata
Journal:  J Clin Med       Date:  2022-02-25       Impact factor: 4.241

5.  Downregulation of epithelial sodium channel (ENaC) activity in cystic fibrosis cells by epigenetic targeting.

Authors:  Giovanna Blaconà; Roberto Raso; Stefano Castellani; Silvia Pierandrei; Paola Del Porto; Giampiero Ferraguti; Fiorentina Ascenzioni; Massimo Conese; Marco Lucarelli
Journal:  Cell Mol Life Sci       Date:  2022-04-25       Impact factor: 9.207

Review 6.  Experimental and Computational Approaches for Non-CpG Methylation Analysis.

Authors:  Deepa Ramasamy; Arunagiri Kuha Deva Magendhra Rao; Thangarajan Rajkumar; Samson Mani
Journal:  Epigenomes       Date:  2022-08-16

Review 7.  DNA methylation as a mediator of genetic and environmental influences on Parkinson's disease susceptibility: Impacts of alpha-Synuclein, physical activity, and pesticide exposure on the epigenome.

Authors:  Samantha L Schaffner; Michael S Kobor
Journal:  Front Genet       Date:  2022-08-19       Impact factor: 4.772

  7 in total

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