Literature DB >> 30763433

Next-Generation Sequencing of Infectious Pathogens.

Marta Gwinn1, Duncan MacCannell2, Gregory L Armstrong2.   

Abstract

Entities:  

Mesh:

Year:  2019        PMID: 30763433      PMCID: PMC6682455          DOI: 10.1001/jama.2018.21669

Source DB:  PubMed          Journal:  JAMA        ISSN: 0098-7484            Impact factor:   56.272


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  7 in total

Review 1.  Integrating Advanced Molecular Technologies into Public Health.

Authors:  Marta Gwinn; Duncan R MacCannell; Rima F Khabbaz
Journal:  J Clin Microbiol       Date:  2016-12-28       Impact factor: 5.948

Review 2.  Assuring the Quality of Next-Generation Sequencing in Clinical Microbiology and Public Health Laboratories.

Authors:  Amy S Gargis; Lisa Kalman; Ira M Lubin
Journal:  J Clin Microbiol       Date:  2016-08-10       Impact factor: 5.948

Review 3.  A brief primer on genomic epidemiology: lessons learned from Mycobacterium tuberculosis.

Authors:  Jennifer L Guthrie; Jennifer L Gardy
Journal:  Ann N Y Acad Sci       Date:  2016-12-23       Impact factor: 5.691

Review 4.  Whole-Genome Sequencing of Bacterial Pathogens: the Future of Nosocomial Outbreak Analysis.

Authors:  Scott Quainoo; Jordy P M Coolen; Sacha A F T van Hijum; Martijn A Huynen; Willem J G Melchers; Willem van Schaik; Heiman F L Wertheim
Journal:  Clin Microbiol Rev       Date:  2017-10       Impact factor: 26.132

Review 5.  Next-generation sequencing technologies and their application to the study and control of bacterial infections.

Authors:  J Besser; H A Carleton; P Gerner-Smidt; R L Lindsey; E Trees
Journal:  Clin Microbiol Infect       Date:  2017-10-23       Impact factor: 8.067

6.  Real-time, portable genome sequencing for Ebola surveillance.

Authors:  Joshua Quick; Nicholas J Loman; Sophie Duraffour; Jared T Simpson; Ettore Severi; Lauren Cowley; Joseph Akoi Bore; Raymond Koundouno; Gytis Dudas; Amy Mikhail; Nobila Ouédraogo; Babak Afrough; Amadou Bah; Jonathan Hj Baum; Beate Becker-Ziaja; Jan-Peter Boettcher; Mar Cabeza-Cabrerizo; Alvaro Camino-Sanchez; Lisa L Carter; Juiliane Doerrbecker; Theresa Enkirch; Isabel Graciela García Dorival; Nicole Hetzelt; Julia Hinzmann; Tobias Holm; Liana Eleni Kafetzopoulou; Michel Koropogui; Abigail Kosgey; Eeva Kuisma; Christopher H Logue; Antonio Mazzarelli; Sarah Meisel; Marc Mertens; Janine Michel; Didier Ngabo; Katja Nitzsche; Elisa Pallash; Livia Victoria Patrono; Jasmine Portmann; Johanna Gabriella Repits; Natasha Yasmin Rickett; Andrea Sachse; Katrin Singethan; Inês Vitoriano; Rahel L Yemanaberhan; Elsa G Zekeng; Racine Trina; Alexander Bello; Amadou Alpha Sall; Ousmane Faye; Oumar Faye; N'Faly Magassouba; Cecelia V Williams; Victoria Amburgey; Linda Winona; Emily Davis; Jon Gerlach; Franck Washington; Vanessa Monteil; Marine Jourdain; Marion Bererd; Alimou Camara; Hermann Somlare; Abdoulaye Camara; Marianne Gerard; Guillaume Bado; Bernard Baillet; Déborah Delaune; Koumpingnin Yacouba Nebie; Abdoulaye Diarra; Yacouba Savane; Raymond Bernard Pallawo; Giovanna Jaramillo Gutierrez; Natacha Milhano; Isabelle Roger; Christopher J Williams; Facinet Yattara; Kuiama Lewandowski; Jamie Taylor; Philip Rachwal; Daniel Turner; Georgios Pollakis; Julian A Hiscox; David A Matthews; Matthew K O'Shea; Andrew McD Johnston; Duncan Wilson; Emma Hutley; Erasmus Smit; Antonino Di Caro; Roman Woelfel; Kilian Stoecker; Erna Fleischmann; Martin Gabriel; Simon A Weller; Lamine Koivogui; Boubacar Diallo; Sakoba Keita; Andrew Rambaut; Pierre Formenty; Stephan Gunther; Miles W Carroll
Journal:  Nature       Date:  2016-02-03       Impact factor: 69.504

7.  Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing.

Authors:  Caroline Allix-Béguec; Irena Arandjelovic; Lijun Bi; Patrick Beckert; Maryline Bonnet; Phelim Bradley; Andrea M Cabibbe; Irving Cancino-Muñoz; Mark J Caulfield; Angkana Chaiprasert; Daniela M Cirillo; David A Clifton; Iñaki Comas; Derrick W Crook; Maria R De Filippo; Han de Neeling; Roland Diel; Francis A Drobniewski; Kiatichai Faksri; Maha R Farhat; Joy Fleming; Philip Fowler; Tom A Fowler; Qian Gao; Jennifer Gardy; Deborah Gascoyne-Binzi; Ana-Luiza Gibertoni-Cruz; Ana Gil-Brusola; Tanya Golubchik; Ximena Gonzalo; Louis Grandjean; Guangxue He; Jennifer L Guthrie; Sarah Hoosdally; Martin Hunt; Zamin Iqbal; Nazir Ismail; James Johnston; Faisal M Khanzada; Chiea C Khor; Thomas A Kohl; Clare Kong; Sam Lipworth; Qingyun Liu; Gugu Maphalala; Elena Martinez; Vanessa Mathys; Matthias Merker; Paolo Miotto; Nerges Mistry; David A J Moore; Megan Murray; Stefan Niemann; Shaheed V Omar; Rick T-H Ong; Tim E A Peto; James E Posey; Therdsak Prammananan; Alexander Pym; Camilla Rodrigues; Mabel Rodrigues; Timothy Rodwell; Gian M Rossolini; Elisabeth Sánchez Padilla; Marco Schito; Xin Shen; Jay Shendure; Vitali Sintchenko; Alex Sloutsky; E Grace Smith; Matthew Snyder; Karine Soetaert; Angela M Starks; Philip Supply; Prapat Suriyapol; Sabira Tahseen; Patrick Tang; Yik-Ying Teo; Thuong N T Thuong; Guy Thwaites; Enrico Tortoli; Dick van Soolingen; A Sarah Walker; Timothy M Walker; Mark Wilcox; Daniel J Wilson; David Wyllie; Yang Yang; Hongtai Zhang; Yanlin Zhao; Baoli Zhu
Journal:  N Engl J Med       Date:  2018-09-26       Impact factor: 91.245

  7 in total
  39 in total

1.  Noninfectious complications of hematopoietic cell transplantation.

Authors:  Kirsten M Williams
Journal:  Hematology Am Soc Hematol Educ Program       Date:  2021-12-10

2.  Subtyping Evaluation of Salmonella Enteritidis Using Single Nucleotide Polymorphism and Core Genome Multilocus Sequence Typing with Nanopore Reads.

Authors:  Zhihan Xian; Shaoting Li; David Ames Mann; Yixiao Huang; Feng Xu; Xingwen Wu; Silin Tang; Guangtao Zhang; Abigail Stevenson; Chongtao Ge; Xiangyu Deng
Journal:  Appl Environ Microbiol       Date:  2022-07-12       Impact factor: 5.005

Review 3.  Rapidly Progressive Dementia.

Authors:  Gregory S Day
Journal:  Continuum (Minneap Minn)       Date:  2022-06-01

Review 4.  Present and pioneer methods of early detection of food borne pathogens.

Authors:  G Vidyadharani; H K Vijaya Bhavadharani; P Sathishnath; Shruti Ramanathan; P Sariga; A Sandhya; S Subikshaa; Shobana Sugumar
Journal:  J Food Sci Technol       Date:  2021-05-20       Impact factor: 3.117

Review 5.  Recent Advances in the Use of Molecular Methods for the Diagnosis of Bacterial Infections.

Authors:  Elisabetta Gerace; Giuseppe Mancuso; Angelina Midiri; Stefano Poidomani; Sebastiana Zummo; Carmelo Biondo
Journal:  Pathogens       Date:  2022-06-08

6.  Pathogen Genomics in Public Health.

Authors:  Gregory L Armstrong; Duncan R MacCannell; Jill Taylor; Heather A Carleton; Elizabeth B Neuhaus; Richard S Bradbury; James E Posey; Marta Gwinn
Journal:  N Engl J Med       Date:  2019-12-26       Impact factor: 91.245

7.  Severe Acute Respiratory Syndrome Coronavirus 2: The Emergence of Important Genetic Variants and Testing Options for Clinical Laboratories.

Authors:  Blake W Buchan; Joseph D Yao
Journal:  Clin Microbiol Newsl       Date:  2021-05-21

8.  Complete microbial genomes for public health in Australia and the Southwest Pacific.

Authors:  Sarah L Baines; Anders Gonçalves da Silva; Glen P Carter; Amy Jennison; Irani Rathnayake; Rikki M Graham; Vitali Sintchenko; Qinning Wang; Rebecca J Rockett; Verlaine J Timms; Elena Martinez; Susan Ballard; Takehiro Tomita; Nicole Isles; Kristy A Horan; William Pitchers; Timothy P Stinear; Deborah A Williamson; Benjamin P Howden; Torsten Seemann
Journal:  Microb Genom       Date:  2020-11-12

9.  Global transmission network of SARS-CoV-2: from outbreak to pandemic.

Authors:  Pavel Skums; Alexander Kirpich; Pelin Icer Baykal; Alex Zelikovsky; Gerardo Chowell
Journal:  medRxiv       Date:  2020-03-27

10.  Targeted next generation sequencing for elbow periprosthetic joint infection diagnosis.

Authors:  Laure Flurin; Matthew J Wolf; Kerryl E Greenwood-Quaintance; Joaquin Sanchez-Sotelo; Robin Patel
Journal:  Diagn Microbiol Infect Dis       Date:  2021-06-05       Impact factor: 2.983

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