Literature DB >> 28031438

Integrating Advanced Molecular Technologies into Public Health.

Marta Gwinn1, Duncan R MacCannell2, Rima F Khabbaz3.   

Abstract

Advances in laboratory and information technologies are transforming public health microbiology. High-throughput genome sequencing and bioinformatics are enhancing our ability to investigate and control outbreaks, detect emerging infectious diseases, develop vaccines, and combat antimicrobial resistance, all with increased accuracy, timeliness, and efficiency. The Advanced Molecular Detection (AMD) initiative has allowed the Centers for Disease Control and Prevention (CDC) to provide leadership and coordination in integrating new technologies into routine practice throughout the U.S. public health laboratory system. Collaboration and partnerships are the key to navigating this transition and to leveraging the next generation of methods and tools most effectively for public health.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  bioinformatics; communicable diseases; laboratory science; microbiology; molecular; molecular epidemiology; public health; sequencing

Mesh:

Year:  2016        PMID: 28031438      PMCID: PMC5328438          DOI: 10.1128/JCM.01967-16

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  21 in total

1.  Clinical Microbiology Laboratories' Adoption of Culture-Independent Diagnostic Tests Is a Threat to Foodborne-Disease Surveillance in the United States.

Authors:  Shari Shea; Kristy A Kubota; Hugh Maguire; Stephen Gladbach; Amy Woron; Robyn Atkinson-Dunn; Marc Roger Couturier; Melissa B Miller
Journal:  J Clin Microbiol       Date:  2016-12-28       Impact factor: 5.948

2.  Isolation of a novel coronavirus from a man with pneumonia in Saudi Arabia.

Authors:  Ali M Zaki; Sander van Boheemen; Theo M Bestebroer; Albert D M E Osterhaus; Ron A M Fouchier
Journal:  N Engl J Med       Date:  2012-10-17       Impact factor: 91.245

3.  An Economic Evaluation of PulseNet: A Network for Foodborne Disease Surveillance.

Authors:  Robert L Scharff; John Besser; Donald J Sharp; Timothy F Jones; Gerner-Smidt Peter; Craig W Hedberg
Journal:  Am J Prev Med       Date:  2016-03-15       Impact factor: 5.043

4.  PulseNet: the molecular subtyping network for foodborne bacterial disease surveillance, United States.

Authors:  B Swaminathan; T J Barrett; S B Hunter; R V Tauxe
Journal:  Emerg Infect Dis       Date:  2001 May-Jun       Impact factor: 6.883

5.  Community Outbreak of HIV Infection Linked to Injection Drug Use of Oxymorphone--Indiana, 2015.

Authors:  Caitlin Conrad; Heather M Bradley; Dita Broz; Swamy Buddha; Erika L Chapman; Romeo R Galang; Daniel Hillman; John Hon; Karen W Hoover; Monita R Patel; Andrea Perez; Philip J Peters; Pam Pontones; Jeremy C Roseberry; Michelle Sandoval; Jessica Shields; Jennifer Walthall; Dorothy Waterhouse; Paul J Weidle; Hsiu Wu; Joan M Duwve
Journal:  MMWR Morb Mortal Wkly Rep       Date:  2015-05-01       Impact factor: 17.586

Review 6.  Detecting the emergence of novel, zoonotic viruses pathogenic to humans.

Authors:  Ronald Rosenberg
Journal:  Cell Mol Life Sci       Date:  2014-11-22       Impact factor: 9.261

7.  Viral deep sequencing needs an adaptive approach: IRMA, the iterative refinement meta-assembler.

Authors:  Samuel S Shepard; Sarah Meno; Justin Bahl; Malania M Wilson; John Barnes; Elizabeth Neuhaus
Journal:  BMC Genomics       Date:  2016-09-05       Impact factor: 3.969

8.  First detection of heartland virus (Bunyaviridae: Phlebovirus) from field collected arthropods.

Authors:  Harry M Savage; Marvin S Godsey; Amy Lambert; Nicholas A Panella; Kristen L Burkhalter; Jessica R Harmon; R Ryan Lash; David C Ashley; William L Nicholson
Journal:  Am J Trop Med Hyg       Date:  2013-07-22       Impact factor: 2.345

Review 9.  Making the Leap from Research Laboratory to Clinic: Challenges and Opportunities for Next-Generation Sequencing in Infectious Disease Diagnostics.

Authors:  Brittany Goldberg; Heike Sichtig; Chelsie Geyer; Nathan Ledeboer; George M Weinstock
Journal:  mBio       Date:  2015-12-08       Impact factor: 7.867

10.  First confirmed cases of Middle East respiratory syndrome coronavirus (MERS-CoV) infection in the United States, updated information on the epidemiology of MERS-CoV infection, and guidance for the public, clinicians, and public health authorities - May 2014.

Authors:  Stephanie R Bialek; Donna Allen; Francisco Alvarado-Ramy; Ray Arthur; Arunmozhi Balajee; David Bell; Susan Best; Carina Blackmore; Lucy Breakwell; Andrew Cannons; Clive Brown; Martin Cetron; Nora Chea; Christina Chommanard; Nicole Cohen; Craig Conover; Antonio Crespo; Jeanean Creviston; Aaron T Curns; Rebecca Dahl; Stephanie Dearth; Alfred DeMaria; Fred Echols; Dean D Erdman; Daniel Feikin; Mabel Frias; Susan I Gerber; Reena Gulati; Christa Hale; Lia M Haynes; Lea Heberlein-Larson; Kelly Holton; Kashef Ijaz; Minal Kapoor; Katrin Kohl; David T Kuhar; Alan M Kumar; Marianne Kundich; Susan Lippold; Lixia Liu; Judith C Lovchik; Larry Madoff; Sandra Martell; Sarah Matthews; Jessica Moore; Linda R Murray; Shauna Onofrey; Mark A Pallansch; Nicki Pesik; Huong Pham; Satish Pillai; Pam Pontones; Kimberly Pringle; Scott Pritchard; Sonja Rasmussen; Shawn Richards; Michelle Sandoval; Eileen Schneider; Anne Schuchat; Kristine Sheedy; Kevin Sherin; David L Swerdlow; Jordan W Tappero; Michael O Vernon; Sharon Watkins; John Watson
Journal:  MMWR Morb Mortal Wkly Rep       Date:  2014-05-16       Impact factor: 17.586

View more
  14 in total

1.  Advances in Public Health Surveillance and Information Dissemination at the Centers for Disease Control and Prevention.

Authors:  Chesley L Richards; Michael F Iademarco; Delton Atkinson; Robert W Pinner; Paula Yoon; William R Mac Kenzie; Brian Lee; Judith R Qualters; Thomas R Frieden
Journal:  Public Health Rep       Date:  2017-06-13       Impact factor: 2.792

2.  Next-Generation Sequencing of Infectious Pathogens.

Authors:  Marta Gwinn; Duncan MacCannell; Gregory L Armstrong
Journal:  JAMA       Date:  2019-03-05       Impact factor: 56.272

3.  A systematic analysis of and recommendations for public health events involving brucellosis from 2006 to 2019 in China.

Authors:  Zhiguo Liu; Miao Wang; Yaxin Tian; Zhongqiu Li; Liping Gao; Zhenjun Li
Journal:  Ann Med       Date:  2022-12       Impact factor: 5.348

4.  PIMGAVir and Vir-MinION: Two Viral Metagenomic Pipelines for Complete Baseline Analysis of 2nd and 3rd Generation Data.

Authors:  Emilio Mastriani; Kathrina Mae Bienes; Gary Wong; Nicolas Berthet
Journal:  Viruses       Date:  2022-06-10       Impact factor: 5.818

5.  Are We Prepared for Precision Public Health? An Examination of Genomics Content in Graduate Public Health Programs.

Authors:  Karen L Niemchick; Ally Goerge; Amy H Ponte
Journal:  Public Health Rep       Date:  2021-10-25       Impact factor: 3.117

Review 6.  Status and potential of bacterial genomics for public health practice: a scoping review.

Authors:  Nina Van Goethem; Tine Descamps; Brecht Devleesschauwer; Nancy H C Roosens; Nele A M Boon; Herman Van Oyen; Annie Robert
Journal:  Implement Sci       Date:  2019-08-13       Impact factor: 7.327

7.  Genomics for Molecular Epidemiology and Detecting Transmission of Carbapenemase-Producing Enterobacterales in Victoria, Australia, 2012 to 2016.

Authors:  Norelle L Sherry; Courtney R Lane; Jason C Kwong; Mark Schultz; Michelle Sait; Kerrie Stevens; Susan Ballard; Anders Gonçalves da Silva; Torsten Seemann; Claire L Gorrie; Timothy P Stinear; Deborah A Williamson; Judith Brett; Annaliese van Diemen; Marion Easton; Benjamin P Howden
Journal:  J Clin Microbiol       Date:  2019-08-26       Impact factor: 5.948

8.  Perceived utility and feasibility of pathogen genomics for public health practice: a survey among public health professionals working in the field of infectious diseases, Belgium, 2019.

Authors:  N Van Goethem; M J Struelens; S C J De Keersmaecker; N H C Roosens; A Robert; S Quoilin; H Van Oyen; B Devleesschauwer
Journal:  BMC Public Health       Date:  2020-08-31       Impact factor: 3.295

9.  Integrating whole-genome sequencing within the National Antimicrobial Resistance Surveillance Program in the Philippines.

Authors:  David M Aanensen; Celia C Carlos; Silvia Argimón; Melissa A L Masim; June M Gayeta; Marietta L Lagrada; Polle K V Macaranas; Victoria Cohen; Marilyn T Limas; Holly O Espiritu; Janziel C Palarca; Jeremiah Chilam; Manuel C Jamoralin; Alfred S Villamin; Janice B Borlasa; Agnettah M Olorosa; Lara F T Hernandez; Karis D Boehme; Benjamin Jeffrey; Khalil Abudahab; Charmian M Hufano; Sonia B Sia; John Stelling; Matthew T G Holden
Journal:  Nat Commun       Date:  2020-06-01       Impact factor: 14.919

Review 10.  From public health genomics to precision public health: a 20-year journey.

Authors:  Muin J Khoury; M Scott Bowen; Mindy Clyne; W David Dotson; Marta L Gwinn; Ridgely Fisk Green; Katherine Kolor; Juan L Rodriguez; Anja Wulf; Wei Yu
Journal:  Genet Med       Date:  2017-12-14       Impact factor: 8.822

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.