Literature DB >> 14695641

Bagging survival trees.

Torsten Hothorn1, Berthold Lausen, Axel Benner, Martin Radespiel-Tröger.   

Abstract

Predicted survival probability functions of censored event free survival are improved by bagging survival trees. We suggest a new method to aggregate survival trees in order to obtain better predictions for breast cancer and lymphoma patients. A set of survival trees based on B bootstrap samples is computed. We define the aggregated Kaplan-Meier curve of a new observation by the Kaplan-Meier curve of all observations identified by the B leaves containing the new observation. The integrated Brier score is used for the evaluation of predictive models. We analyse data of a large trial on node positive breast cancer patients conducted by the German Breast Cancer Study Group and a smaller 'pilot' study on diffuse large B-cell lymphoma, where prognostic factors are derived from microarray expression values. In addition, simulation experiments underline the predictive power of our proposal. Copyright 2004 John Wiley & Sons, Ltd.

Entities:  

Mesh:

Year:  2004        PMID: 14695641     DOI: 10.1002/sim.1593

Source DB:  PubMed          Journal:  Stat Med        ISSN: 0277-6715            Impact factor:   2.373


  36 in total

1.  Biological validation of increased schizophrenia risk with NRG1, ERBB4, and AKT1 epistasis via functional neuroimaging in healthy controls.

Authors:  Kristin K Nicodemus; Amanda J Law; Eugenia Radulescu; Augustin Luna; Bhaskar Kolachana; Radhakrishna Vakkalanka; Dan Rujescu; Ina Giegling; Richard E Straub; Kate McGee; Bert Gold; Michael Dean; Pierandrea Muglia; Joseph H Callicott; Hao-Yang Tan; Daniel R Weinberger
Journal:  Arch Gen Psychiatry       Date:  2010-10

2.  Bayesian ensemble methods for survival prediction in gene expression data.

Authors:  Vinicius Bonato; Veerabhadran Baladandayuthapani; Bradley M Broom; Erik P Sulman; Kenneth D Aldape; Kim-Anh Do
Journal:  Bioinformatics       Date:  2010-12-08       Impact factor: 6.937

3.  Bayesian Weibull tree models for survival analysis of clinico-genomic data.

Authors:  Jennifer Clarke; Mike West
Journal:  Stat Methodol       Date:  2008

4.  Tree based weighted learning for estimating individualized treatment rules with censored data.

Authors:  Yifan Cui; Ruoqing Zhu; Michael Kosorok
Journal:  Electron J Stat       Date:  2017-10-18       Impact factor: 1.125

5.  Identifying Pediatric Severe Sepsis and Septic Shock: Accuracy of Diagnosis Codes.

Authors:  Fran Balamuth; Scott L Weiss; Matt Hall; Mark I Neuman; Halden Scott; Patrick W Brady; Raina Paul; Reid W D Farris; Richard McClead; Sierra Centkowski; Shannon Baumer-Mouradian; Jason Weiser; Katie Hayes; Samir S Shah; Elizabeth R Alpern
Journal:  J Pediatr       Date:  2015-10-23       Impact factor: 4.406

6.  Evaluating Random Forests for Survival Analysis using Prediction Error Curves.

Authors:  Ulla B Mogensen; Hemant Ishwaran; Thomas A Gerds
Journal:  J Stat Softw       Date:  2012-09       Impact factor: 6.440

Review 7.  A Tutorial on Evaluating the Time-Varying Discrimination Accuracy of Survival Models Used in Dynamic Decision Making.

Authors:  Aasthaa Bansal; Patrick J Heagerty
Journal:  Med Decis Making       Date:  2018-10-14       Impact factor: 2.583

8.  Tree-Based Analysis.

Authors:  Mousumi Banerjee; Evan Reynolds; Hedvig B Andersson; Brahmajee K Nallamothu
Journal:  Circ Cardiovasc Qual Outcomes       Date:  2019-05

9.  An evaluation of machine learning techniques to predict the outcome of children treated for Hodgkin-Lymphoma on the AHOD0031 trial: A report from the Children's Oncology Group.

Authors:  Cédric Beaulac; Jeffrey S Rosenthal; Qinglin Pei; Debra Friedman; Suzanne Wolden; David Hodgson
Journal:  Appl Artif Intell       Date:  2020-10-14       Impact factor: 1.580

10.  Adapting machine learning techniques to censored time-to-event health record data: A general-purpose approach using inverse probability of censoring weighting.

Authors:  David M Vock; Julian Wolfson; Sunayan Bandyopadhyay; Gediminas Adomavicius; Paul E Johnson; Gabriela Vazquez-Benitez; Patrick J O'Connor
Journal:  J Biomed Inform       Date:  2016-03-16       Impact factor: 6.317

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.