Literature DB >> 30718404

Resonant inelastic X-ray scattering determination of the electronic structure of oxyhemoglobin and its model complex.

James J Yan1, Thomas Kroll1,2, Michael L Baker1, Samuel A Wilson1, Richard Decréau1,3, Marcus Lundberg1,4, Dimosthenis Sokaras2, Pieter Glatzel5, Britt Hedman6, Keith O Hodgson7,2, Edward I Solomon7,2.   

Abstract

Hemoglobin and myoglobin are oxygen-binding proteins with S = 0 heme {FeO2}8 active sites. The electronic structure of these sites has been the subject of much debate. This study utilizes Fe K-edge X-ray absorption spectroscopy (XAS) and 1s2p resonant inelastic X-ray scattering (RIXS) to study oxyhemoglobin and a related heme {FeO2}8 model compound, [(pfp)Fe(1-MeIm)(O2)] (pfp = meso-tetra(α,α,α,α-o-pivalamido-phenyl)porphyrin, or TpivPP, 1-MeIm = 1-methylimidazole) (pfpO2), which was previously analyzed using L-edge XAS. The K-edge XAS and RIXS data of pfpO2 and oxyhemoglobin are compared with the data for low-spin FeII and FeIII [Fe(tpp)(Im)2]0/+ (tpp = tetra-phenyl porphyrin) compounds, which serve as heme references. The X-ray data show that pfpO2 is similar to FeII, while oxyhemoglobin is qualitatively similar to FeIII, but with significant quantitative differences. Density-functional theory (DFT) calculations show that the difference between pfpO2 and oxyhemoglobin is due to a distal histidine H bond to O2 and the less hydrophobic environment in the protein, which lead to more backbonding into the O2 A valence bond configuration interaction multiplet model is used to analyze the RIXS data and show that pfpO2 is dominantly FeII with 6-8% FeIII character, while oxyhemoglobin has a very mixed wave function that has 50-77% FeIII character and a partially polarized Fe-O2 π-bond.

Entities:  

Keywords:  DFT; X-ray spectroscopy; electronic structure; oxyhemoglobin; resonant inelastic X-ray scattering

Mesh:

Substances:

Year:  2019        PMID: 30718404      PMCID: PMC6386657          DOI: 10.1073/pnas.1815981116

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

1.  Iron L-edge X-ray absorption spectroscopy of oxy-picket fence porphyrin: experimental insight into Fe-O2 bonding.

Authors:  Samuel A Wilson; Thomas Kroll; Richard A Decreau; Rosalie K Hocking; Marcus Lundberg; Britt Hedman; Keith O Hodgson; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2013-01-10       Impact factor: 15.419

2.  Fe L-edge XAS studies of K4[Fe(CN)6] and K3[Fe(CN)6]: a direct probe of back-bonding.

Authors:  Rosalie K Hocking; Erik C Wasinger; Frank M F de Groot; Keith O Hodgson; Britt Hedman; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2006-08-16       Impact factor: 15.419

3.  Fe L-edge X-ray absorption spectroscopy of low-spin heme relative to non-heme Fe complexes: delocalization of Fe d-electrons into the porphyrin ligand.

Authors:  Rosalie K Hocking; Erik C Wasinger; Yi-Long Yan; Frank M F Degroot; F Ann Walker; Keith O Hodgson; Britt Hedman; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2007-01-10       Impact factor: 15.419

4.  High-field, variable-temperature Mössbauer effect measurements on oxyhemeproteins.

Authors:  B Boso; P G Debrunner; G C Wagner; T Inubushi
Journal:  Biochim Biophys Acta       Date:  1984-12-07

5.  Fe L-edge X-ray absorption spectroscopy determination of differential orbital covalency of siderophore model compounds: electronic structure contributions to high stability constants.

Authors:  Rosalie K Hocking; Serena DeBeer George; Kenneth N Raymond; Keith O Hodgson; Britt Hedman; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2010-03-24       Impact factor: 15.419

6.  Iron porphyrins with different imidazole ligands. A theoretical comparative study.

Authors:  Meng-Sheng Liao; Ming-Ju Huang; John D Watts
Journal:  J Phys Chem A       Date:  2010-09-09       Impact factor: 2.781

7.  L-edge X-ray absorption spectroscopy of non-heme iron sites: experimental determination of differential orbital covalency.

Authors:  Erik C Wasinger; Frank M F de Groot; Britt Hedman; Keith O Hodgson; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2003-10-22       Impact factor: 15.419

8.  Effect of distal interactions on O2 binding to heme.

Authors:  Kasper P Kepp; Pouria Dasmeh
Journal:  J Phys Chem B       Date:  2013-04-01       Impact factor: 2.991

9.  Nature of O2 and CO binding to metalloporphyrins and heme proteins.

Authors:  J P Collman; J I Brauman; T R Halbert; K S Suslick
Journal:  Proc Natl Acad Sci U S A       Date:  1976-10       Impact factor: 11.205

10.  Resonant inelastic X-ray scattering on ferrous and ferric bis-imidazole porphyrin and cytochrome c: nature and role of the axial methionine-Fe bond.

Authors:  Thomas Kroll; Ryan G Hadt; Samuel A Wilson; Marcus Lundberg; James J Yan; Tsu-Chien Weng; Dimosthenis Sokaras; Roberto Alonso-Mori; Diego Casa; Mary H Upton; Britt Hedman; Keith O Hodgson; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2014-12-18       Impact factor: 15.419

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  4 in total

1.  Heme-FeIII Superoxide, Peroxide and Hydroperoxide Thermodynamic Relationships: FeIII-O2•- Complex H-Atom Abstraction Reactivity.

Authors:  Hyun Kim; Patrick J Rogler; Savita K Sharma; Andrew W Schaefer; Edward I Solomon; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2020-01-28       Impact factor: 15.419

2.  Effect of 3d/4p Mixing on 1s2p Resonant Inelastic X-ray Scattering: Electronic Structure of Oxo-Bridged Iron Dimers.

Authors:  Thomas Kroll; Michael L Baker; Samuel A Wilson; Marcus Lundberg; Amélie Juhin; Marie-Anne Arrio; James J Yan; Leland B Gee; Augustin Braun; Tsu-Chien Weng; Dimosthenis Sokaras; Britt Hedman; Keith O Hodgson; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2021-03-17       Impact factor: 15.419

3.  Millisecond timescale reactions observed via X-ray spectroscopy in a 3D microfabricated fused silica mixer.

Authors:  Diego A Huyke; Ashwin Ramachandran; Oscar Ramirez-Neri; Jose A Guerrero-Cruz; Leland B Gee; Augustin Braun; Dimosthenis Sokaras; Brenda Garcia-Estrada; Edward I Solomon; Britt Hedman; Mario U Delgado-Jaime; Daniel P DePonte; Thomas Kroll; Juan G Santiago
Journal:  J Synchrotron Radiat       Date:  2021-05-19       Impact factor: 2.557

4.  X-ray absorption spectroscopy of exemplary platinum porphyrin and corrole derivatives: metal- versus ligand-centered oxidation.

Authors:  Benjamin D Matson; Kolle E Thomas; Abraham B Alemayehu; Abhik Ghosh; Ritimukta Sarangi
Journal:  RSC Adv       Date:  2021-09-30       Impact factor: 4.036

  4 in total

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