Literature DB >> 34212873

Millisecond timescale reactions observed via X-ray spectroscopy in a 3D microfabricated fused silica mixer.

Diego A Huyke1, Ashwin Ramachandran1, Oscar Ramirez-Neri2, Jose A Guerrero-Cruz2, Leland B Gee1, Augustin Braun1, Dimosthenis Sokaras3, Brenda Garcia-Estrada2, Edward I Solomon1, Britt Hedman3, Mario U Delgado-Jaime2, Daniel P DePonte4, Thomas Kroll3, Juan G Santiago1.   

Abstract

Determination of electronic structures during chemical reactions remains challenging in studies which involve reactions in the millisecond timescale, toxic chemicals, and/or anaerobic conditions. In this study, a three-dimensionally (3D) microfabricated microfluidic mixer platform that is compatible with time-resolved X-ray absorption and emission spectroscopy (XAS and XES, respectively) is presented. This platform, to initiate reactions and study their progression, mixes a high flow rate (0.50-1.5 ml min-1) sheath stream with a low-flow-rate (5-90 µl min-1) sample stream within a monolithic fused silica chip. The chip geometry enables hydrodynamic focusing of the sample stream in 3D and sample widths as small as 5 µm. The chip is also connected to a polyimide capillary downstream to enable sample stream deceleration, expansion, and X-ray detection. In this capillary, sample widths of 50 µm are demonstrated. Further, convection-diffusion-reaction models of the mixer are presented. The models are experimentally validated using confocal epifluorescence microscopy and XAS/XES measurements of a ferricyanide and ascorbic acid reaction. The models additionally enable prediction of the residence time and residence time uncertainty of reactive species as well as mixing times. Residence times (from initiation of mixing to the point of X-ray detection) during sample stream expansion as small as 2.1 ± 0.3 ms are also demonstrated. Importantly, an exploration of the mixer operational space reveals a theoretical minimum mixing time of 0.91 ms. The proposed platform is applicable to the determination of the electronic structure of conventionally inaccessible reaction intermediates.

Entities:  

Keywords:  3D microfabrication; X-ray spectroscopy; kinetics; microfluidics; mixing

Year:  2021        PMID: 34212873      PMCID: PMC8284405          DOI: 10.1107/S1600577521003830

Source DB:  PubMed          Journal:  J Synchrotron Radiat        ISSN: 0909-0495            Impact factor:   2.557


  32 in total

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2.  Achieving uniform mixing in a microfluidic device: hydrodynamic focusing prior to mixing.

Authors:  Hye Yoon Park; Xiangyun Qiu; Elizabeth Rhoades; Jonas Korlach; Lisa W Kwok; Warren R Zipfel; Watt W Webb; Lois Pollack
Journal:  Anal Chem       Date:  2006-07-01       Impact factor: 6.986

3.  The fastest global events in RNA folding: electrostatic relaxation and tertiary collapse of the Tetrahymena ribozyme.

Authors:  Rhiju Das; Lisa W Kwok; Ian S Millett; Yu Bai; Thalia T Mills; Jaby Jacob; Gregory S Maskel; Soenke Seifert; Simon G J Mochrie; P Thiyagarajan; Sebastian Doniach; Lois Pollack; Daniel Herschlag
Journal:  J Mol Biol       Date:  2003-09-12       Impact factor: 5.469

4.  A seven-crystal Johann-type hard x-ray spectrometer at the Stanford Synchrotron Radiation Lightsource.

Authors:  D Sokaras; T-C Weng; D Nordlund; R Alonso-Mori; P Velikov; D Wenger; A Garachtchenko; M George; V Borzenets; B Johnson; T Rabedeau; U Bergmann
Journal:  Rev Sci Instrum       Date:  2013-05       Impact factor: 1.523

5.  Reconstructing three-dimensional shape envelopes from time-resolved small-angle X-ray scattering data.

Authors:  Jessica Lamb; Lisa Kwok; Xiangyun Qiu; Kurt Andresen; Hye Yoon Park; Lois Pollack
Journal:  J Appl Crystallogr       Date:  2008-10-11       Impact factor: 3.304

6.  A coaxial jet mixer for rapid kinetic analysis in flow injection and flow injection cytometry.

Authors:  L D Scampavia; G Blankenstein; J Ruzicka; G D Christian
Journal:  Anal Chem       Date:  1995-09-01       Impact factor: 6.986

7.  On the competition between mixing rate and uniformity in a coaxial hydrodynamic focusing mixer.

Authors:  Diego A Huyke; Ashwin Ramachandran; Diego I Oyarzun; Thomas Kroll; Daniel P DePonte; Juan G Santiago
Journal:  Anal Chim Acta       Date:  2020-01-08       Impact factor: 6.558

8.  Self-assembly of fluorinated gradient copolymer in three-dimensional co-flow focusing microfluidic.

Authors:  Chengzhi Zhu; Rongyi Yao; Yanjun Chen; Mengran Feng; Shuai Ma; Chaocan Zhang
Journal:  J Colloid Interface Sci       Date:  2018-04-18       Impact factor: 8.128

9.  Mixing injector enables time-resolved crystallography with high hit rate at X-ray free electron lasers.

Authors:  George D Calvey; Andrea M Katz; Chris B Schaffer; Lois Pollack
Journal:  Struct Dyn       Date:  2016-08-29       Impact factor: 2.920

10.  3D-MiXD: 3D-printed X-ray-compatible microfluidic devices for rapid, low-consumption serial synchrotron crystallography data collection in flow.

Authors:  Diana C F Monteiro; David von Stetten; Claudia Stohrer; Marta Sans; Arwen R Pearson; Gianluca Santoni; Peter van der Linden; Martin Trebbin
Journal:  IUCrJ       Date:  2020-01-16       Impact factor: 4.769

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  1 in total

1.  Millisecond timescale reactions observed via X-ray spectroscopy in a 3D microfabricated fused silica mixer. Corrigendum.

Authors:  Diego A Huyke; Ashwin Ramachandran; Oscar Ramirez-Neri; Jose A Guerrero-Cruz; Leland B Gee; Augustin Braun; Dimosthenis Sokaras; Brenda Garcia-Estrada; Edward I Solomon; Britt Hedman; Mario U Delgado-Jaime; Daniel P DePonte; Thomas Kroll; Juan G Santiago
Journal:  J Synchrotron Radiat       Date:  2022-04-05       Impact factor: 2.557

  1 in total

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