Literature DB >> 30677473

Novel genetic and epigenetic factors of importance for inter-individual differences in drug disposition, response and toxicity.

Volker M Lauschke1, Yitian Zhou1, Magnus Ingelman-Sundberg2.   

Abstract

Individuals differ substantially in their response to pharmacological treatment. Personalized medicine aspires to embrace these inter-individual differences and customize therapy by taking a wealth of patient-specific data into account. Pharmacogenomic constitutes a cornerstone of personalized medicine that provides therapeutic guidance based on the genomic profile of a given patient. Pharmacogenomics already has applications in the clinics, particularly in oncology, whereas future development in this area is needed in order to establish pharmacogenomic biomarkers as useful clinical tools. In this review we present an updated overview of current and emerging pharmacogenomic biomarkers in different therapeutic areas and critically discuss their potential to transform clinical care. Furthermore, we discuss opportunities of technological, methodological and institutional advances to improve biomarker discovery. We also summarize recent progress in our understanding of epigenetic effects on drug disposition and response, including a discussion of the only few pharmacogenomic biomarkers implemented into routine care. We anticipate, in part due to exciting rapid developments in Next Generation Sequencing technologies, machine learning methods and national biobanks, that the field will make great advances in the upcoming years towards unlocking the full potential of genomic data.
Copyright © 2019 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Year:  2019        PMID: 30677473      PMCID: PMC6527860          DOI: 10.1016/j.pharmthera.2019.01.002

Source DB:  PubMed          Journal:  Pharmacol Ther        ISSN: 0163-7258            Impact factor:   12.310


  423 in total

1.  Function of RARgamma and RARalpha2 at the initiation of retinoid signaling is essential for avian embryo survival and for distinct events in cardiac morphogenesis.

Authors:  Mahmoud Romeih; Jian Cui; Jean-Jacques Michaille; Weihong Jiang; Maija H Zile
Journal:  Dev Dyn       Date:  2003-12       Impact factor: 3.780

2.  Immune self-reactivity triggered by drug-modified HLA-peptide repertoire.

Authors:  Patricia T Illing; Julian P Vivian; Nadine L Dudek; Lyudmila Kostenko; Zhenjun Chen; Mandvi Bharadwaj; John J Miles; Lars Kjer-Nielsen; Stephanie Gras; Nicholas A Williamson; Scott R Burrows; Anthony W Purcell; Jamie Rossjohn; James McCluskey
Journal:  Nature       Date:  2012-06-28       Impact factor: 49.962

3.  Genetic variations in GRIA1 on chromosome 5q33 related to asparaginase hypersensitivity.

Authors:  S-H Chen; D Pei; W Yang; C Cheng; S Jeha; N J Cox; W E Evans; C-H Pui; M V Relling
Journal:  Clin Pharmacol Ther       Date:  2010-06-30       Impact factor: 6.875

4.  HLA-A31 strongly associates with carbamazepine-induced adverse drug reactions but not with carbamazepine-induced lymphocyte proliferation in a Japanese population.

Authors:  Hiroyuki Niihara; Takeyasu Kakamu; Yasuyuki Fujita; Sakae Kaneko; Eishin Morita
Journal:  J Dermatol       Date:  2011-12-29       Impact factor: 4.005

5.  Impact of NADPH oxidase functional polymorphisms in acute myeloid leukemia induction chemotherapy.

Authors:  J E Megías-Vericat; P Montesinos; M J Herrero; F Moscardó; V Bosó; L Rojas; D Martínez-Cuadrón; R Rodríguez-Veiga; L Sendra; J Cervera; J L Poveda; M Á Sanz; S F Aliño
Journal:  Pharmacogenomics J       Date:  2017-05-09       Impact factor: 3.550

6.  Predisposition to nevirapine hypersensitivity associated with HLA-DRB1*0101 and abrogated by low CD4 T-cell counts.

Authors:  Annalise M Martin; David Nolan; Ian James; Paul Cameron; Jean Keller; Corey Moore; Elizabeth Phillips; Frank T Christiansen; Simon Mallal
Journal:  AIDS       Date:  2005-01-03       Impact factor: 4.177

7.  Genomic features defining exonic variants that modulate splicing.

Authors:  Adam Woolfe; James C Mullikin; Laura Elnitski
Journal:  Genome Biol       Date:  2010-02-16       Impact factor: 13.583

8.  Genetic control of drug levels in man: phenylbutazone.

Authors:  E S Vesell; J G Page
Journal:  Science       Date:  1968-03-29       Impact factor: 47.728

9.  Evidence for association of SNPs in ABCB1 and CBR3, but not RAC2, NCF4, SLC28A3 or TOP2B, with chronic cardiotoxicity in a cohort of breast cancer patients treated with anthracyclines.

Authors:  Daniel L Hertz; Megan V Caram; Kelley M Kidwell; Jacklyn N Thibert; Christina Gersch; Nicholas J Seewald; Jeffrey Smerage; Melvyn Rubenfire; N Lynn Henry; Kathleen A Cooney; Monika Leja; Jennifer J Griggs; James M Rae
Journal:  Pharmacogenomics       Date:  2016-01-22       Impact factor: 2.533

10.  Cost-effectiveness of screening for HLA-A*31:01 prior to initiation of carbamazepine in epilepsy.

Authors:  Catrin O Plumpton; Vincent L M Yip; Ana Alfirevic; Anthony G Marson; Munir Pirmohamed; Dyfrig A Hughes
Journal:  Epilepsia       Date:  2015-04       Impact factor: 5.864

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  25 in total

1.  Implementation and obstacles of pharmacogenetics in clinical practice: An international survey.

Authors:  Elizabeth Abou Diwan; Ralph I Zeitoun; Lea Abou Haidar; Ingolf Cascorbi; Nathalie Khoueiry Zgheib
Journal:  Br J Clin Pharmacol       Date:  2019-07-07       Impact factor: 4.335

Review 2.  Emerging strategies to bridge the gap between pharmacogenomic research and its clinical implementation.

Authors:  Volker M Lauschke; Magnus Ingelman-Sundberg
Journal:  NPJ Genom Med       Date:  2020-03-05       Impact factor: 8.617

3.  Considerations of biomarker application for cancer continuum in the era of precision medicine.

Authors:  Rayjean J Hung; Elham Khodayari Moez; Shana J Kim; Sanjeev Budhathoki; Jennifer D Brooks
Journal:  Curr Epidemiol Rep       Date:  2022-07-09

4.  Delabeling Delayed Drug Hypersensitivity: How Far Can You Safely Go?

Authors:  Rannakoe J Lehloenya; Jonny G Peter; Ana Copascu; Jason A Trubiano; Elizabeth J Phillips
Journal:  J Allergy Clin Immunol Pract       Date:  2020-10

5.  Pharmacogene Sequencing of a Gabonese Population with Severe Plasmodium falciparum Malaria Reveals Multiple Novel Variants with Putative Relevance for Antimalarial Treatment.

Authors:  Leyre Pernaute-Lau; Ayola Akim Adegnika; Yitian Zhou; Jeannot F Zinsou; Jose Pedro Gil; Sanjeev Krishna; Peter G Kremsner; Volker M Lauschke; Thirumalaisamy P Velavan
Journal:  Antimicrob Agents Chemother       Date:  2021-06-17       Impact factor: 5.191

6.  Development of the PGx-Passport: A Panel of Actionable Germline Genetic Variants for Pre-Emptive Pharmacogenetic Testing.

Authors:  Cathelijne H van der Wouden; Mandy H van Rhenen; Wafa O M Jama; Magnus Ingelman-Sundberg; Volker M Lauschke; Lidija Konta; Matthias Schwab; Jesse J Swen; Henk-Jan Guchelaar
Journal:  Clin Pharmacol Ther       Date:  2019-06-12       Impact factor: 6.875

Review 7.  Pharmacogenomics of Hypersensitivity to Non-steroidal Anti-inflammatory Drugs.

Authors:  Hoang Kim Tu Trinh; Le Duy Pham; Kieu Minh Le; Hae-Sim Park
Journal:  Front Genet       Date:  2021-06-25       Impact factor: 4.599

Review 8.  Inflammation is a major regulator of drug metabolizing enzymes and transporters: Consequences for the personalization of drug treatment.

Authors:  Françoise Stanke-Labesque; Elodie Gautier-Veyret; Stephanie Chhun; Romain Guilhaumou
Journal:  Pharmacol Ther       Date:  2020-07-11       Impact factor: 12.310

9.  Generating evidence for precision medicine: considerations made by the Ubiquitous Pharmacogenomics Consortium when designing and operationalizing the PREPARE study.

Authors:  Cathelijne H van der Wouden; Stefan Böhringer; Erika Cecchin; Ka-Chun Cheung; Cristina Lucía Dávila-Fajardo; Vera H M Deneer; Vita Dolžan; Magnus Ingelman-Sundberg; Siv Jönsson; Mats O Karlsson; Marjolein Kriek; Christina Mitropoulou; George P Patrinos; Munir Pirmohamed; Emmanuelle Rial-Sebbag; Matthias Samwald; Matthias Schwab; Daniela Steinberger; Julia Stingl; Gere Sunder-Plassmann; Giuseppe Toffoli; Richard M Turner; Mandy H van Rhenen; Erik van Zwet; Jesse J Swen; Henk-Jan Guchelaar
Journal:  Pharmacogenet Genomics       Date:  2020-08       Impact factor: 2.000

10.  Evaluation of Current Regulation and Guidelines of Pharmacogenomic Drug Labels: Opportunities for Improvements.

Authors:  Rawan Shekhani; Linda Steinacher; Jesse J Swen; Magnus Ingelman-Sundberg
Journal:  Clin Pharmacol Ther       Date:  2019-12-17       Impact factor: 6.875

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