Literature DB >> 30657670

A "Clickable" Photoconvertible Small Fluorescent Molecule as a Minimalist Probe for Tracking Individual Biomolecule Complexes.

Joomyung V Jun1, Conor M Haney1, Richard J Karpowicz2, Sam Giannakoulias1, Virginia M-Y Lee2, E James Petersson1, David M Chenoweth1.   

Abstract

Photoconvertible fluorophores can enable the visualization and tracking of a specific biomolecules, complexes, and cellular compartments with precise spatiotemporal control. The field of photoconvertible probes is dominated by fluorescent protein variants, which can introduce perturbations to the target biomolecules due to their large size. Here, we present a photoconvertible small molecule, termed CPX, that can be conjugated to any target through azide-alkyne cycloaddition ("click" reaction). To demonstrate its utility, we have applied CPX to study (1) trafficking of biologically relevant synthetic vesicles and (2) intracellular processes involved in transmission of α-synuclein (αS) pathology. Our results demonstrate that CPX can serve as a minimally perturbing probe for tracking the dynamics of biomolecules.

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Year:  2019        PMID: 30657670      PMCID: PMC6732186          DOI: 10.1021/jacs.8b13094

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  30 in total

Review 1.  Innovation: Photoactivatable fluorescent proteins.

Authors:  Konstantin A Lukyanov; Dmitry M Chudakov; Sergey Lukyanov; Vladislav V Verkhusha
Journal:  Nat Rev Mol Cell Biol       Date:  2005-11       Impact factor: 94.444

2.  Dual labeling of biomolecules by using click chemistry: a sequential approach.

Authors:  Péter Kele; Gábor Mezö; Daniela Achatz; Otto S Wolfbeis
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

3.  A photoactivatable push-pull fluorophore for single-molecule imaging in live cells.

Authors:  Samuel J Lord; Nicholas R Conley; Hsiao-lu D Lee; Reichel Samuel; Na Liu; Robert J Twieg; W E Moerner
Journal:  J Am Chem Soc       Date:  2008-06-24       Impact factor: 15.419

4.  Lipid peroxides promote large rafts: effects of excitation of probes in fluorescence microscopy and electrochemical reactions during vesicle formation.

Authors:  Artem G Ayuyan; Fredric S Cohen
Journal:  Biophys J       Date:  2006-06-30       Impact factor: 4.033

Review 5.  Expanding the genetic code.

Authors:  Lei Wang; Peter G Schultz
Journal:  Angew Chem Int Ed Engl       Date:  2004-12-17       Impact factor: 15.336

6.  Photoactivatable and photoconvertible fluorescent probes for protein labeling.

Authors:  Damien Maurel; Sambashiva Banala; Thierry Laroche; Kai Johnsson
Journal:  ACS Chem Biol       Date:  2010-05-21       Impact factor: 5.100

7.  Aggregation promoting C-terminal truncation of alpha-synuclein is a normal cellular process and is enhanced by the familial Parkinson's disease-linked mutations.

Authors:  Wenxue Li; Neva West; Emanuela Colla; Olga Pletnikova; Juan C Troncoso; Laura Marsh; Ted M Dawson; Pekka Jäkälä; Tobias Hartmann; Donald L Price; Michael K Lee
Journal:  Proc Natl Acad Sci U S A       Date:  2005-01-31       Impact factor: 11.205

8.  Sorting of lipids and proteins in membrane curvature gradients.

Authors:  A Tian; T Baumgart
Journal:  Biophys J       Date:  2009-04-08       Impact factor: 4.033

9.  Two-photon uncaging with fluorescence reporting: evaluation of the o-hydroxycinnamic platform.

Authors:  Nathalie Gagey; Pierre Neveu; Chouaha Benbrahim; Bernard Goetz; Isabelle Aujard; Jean-Bernard Baudin; Ludovic Jullien
Journal:  J Am Chem Soc       Date:  2007-07-21       Impact factor: 15.419

10.  Bioorthogonal chemistry: fishing for selectivity in a sea of functionality.

Authors:  Ellen M Sletten; Carolyn R Bertozzi
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

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  8 in total

1.  Synthesis and characterization of high affinity fluorogenic α-synuclein probes.

Authors:  Zsofia Lengyel-Zhand; John J Ferrie; Bieneke Janssen; Chia-Ju Hsieh; Thomas Graham; Kui-Ying Xu; Conor M Haney; Virginia M-Y Lee; John Q Trojanowski; E James Petersson; Robert H Mach
Journal:  Chem Commun (Camb)       Date:  2020-03-24       Impact factor: 6.222

Review 2.  Deciphering the Structure and Formation of Amyloids in Neurodegenerative Diseases With Chemical Biology Tools.

Authors:  Isabelle Landrieu; Elian Dupré; Davy Sinnaeve; Léa El Hajjar; Caroline Smet-Nocca
Journal:  Front Chem       Date:  2022-05-12       Impact factor: 5.545

Review 3.  New strategies for fluorescently labeling proteins in the study of amyloids.

Authors:  Marie Shimogawa; E James Petersson
Journal:  Curr Opin Chem Biol       Date:  2021-06-03       Impact factor: 8.972

4.  Genetic encoding of a highly photostable, long lifetime fluorescent amino acid for imaging in mammalian cells.

Authors:  Chloe M Jones; D Miklos Robkis; Robert J Blizzard; Mika Munari; Yarra Venkatesh; Tiberiu S Mihaila; Alex J Eddins; Ryan A Mehl; William N Zagotta; Sharona E Gordon; E James Petersson
Journal:  Chem Sci       Date:  2021-08-03       Impact factor: 9.969

Review 5.  Rational design of small molecule fluorescent probes for biological applications.

Authors:  Joomyung V Jun; David M Chenoweth; E James Petersson
Journal:  Org Biomol Chem       Date:  2020-08-05       Impact factor: 3.876

6.  Quantitative interrogation of protein co-aggregation using multi-color fluorogenic protein aggregation sensors.

Authors:  Yulong Bai; Wang Wan; Yanan Huang; Wenhan Jin; Haochen Lyu; Qiuxuan Xia; Xuepeng Dong; Zhenming Gao; Yu Liu
Journal:  Chem Sci       Date:  2021-05-20       Impact factor: 9.825

Review 7.  Nanoparticle-based Cell Trackers for Biomedical Applications.

Authors:  Jen-Shyang Ni; Yaxi Li; Wentong Yue; Bin Liu; Kai Li
Journal:  Theranostics       Date:  2020-01-12       Impact factor: 11.556

Review 8.  DNA-assisted site-selective protein modification.

Authors:  Jordi F Keijzer; Bauke Albada
Journal:  Biopolymers       Date:  2021-12-08       Impact factor: 2.240

  8 in total

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