Literature DB >> 34091264

New strategies for fluorescently labeling proteins in the study of amyloids.

Marie Shimogawa1, E James Petersson2.   

Abstract

Amyloid proteins are widely studied, both for their unusual biophysical properties and their association with disorders such as Alzheimer's and Parkinson's disease. Fluorescence-based methods using site-specifically labeled proteins can provide information on the details of their structural dynamics and their roles in specific biological processes. Here, we describe the application of different labeling methods and novel fluorescent probe strategies to the study of amyloid proteins, both for in vitro biophysical experiments and for in vivo imaging. These labeling tools can be elegantly used to answer important questions on the function and pathology of amyloid proteins.
Copyright © 2021 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Amyloid; Aβ; Click chemistry; ESIPT; FRET; Fluorescent; Huntingtin; Native chemical ligation; SNAP tag; Tau; Unnatural amino acid; α-synuclein

Mesh:

Substances:

Year:  2021        PMID: 34091264      PMCID: PMC8585672          DOI: 10.1016/j.cbpa.2021.04.011

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.972


  66 in total

1.  Analysis of the Amyloidogenic Potential of Pufferfish (Takifugu rubripes) Islet Amyloid Polypeptide Highlights the Limitations of Thioflavin-T Assays and the Difficulties in Defining Amyloidogenicity.

Authors:  Amy G Wong; Chun Wu; Eleni Hannaberry; Matthew D Watson; Joan-Emma Shea; Daniel P Raleigh
Journal:  Biochemistry       Date:  2016-01-13       Impact factor: 3.162

2.  Combined Use of Unnatural Amino Acids Enables Dual-Color Super-Resolution Imaging of Proteins via Click Chemistry.

Authors:  Kim-A Saal; Frank Richter; Peter Rehling; Silvio O Rizzoli
Journal:  ACS Nano       Date:  2018-12-13       Impact factor: 15.881

Review 3.  A new era for understanding amyloid structures and disease.

Authors:  Matthew G Iadanza; Matthew P Jackson; Eric W Hewitt; Neil A Ranson; Sheena E Radford
Journal:  Nat Rev Mol Cell Biol       Date:  2018-12       Impact factor: 94.444

4.  Site-Specific Three-Color Labeling of α-Synuclein via Conjugation to Uniquely Reactive Cysteines during Assembly by Native Chemical Ligation.

Authors:  Taehyung C Lee; Crystal R Moran; Philip A Cistrone; Philip E Dawson; Ashok A Deniz
Journal:  Cell Chem Biol       Date:  2018-04-19       Impact factor: 8.116

5.  Chirality Dependence of Amyloid β Cellular Uptake and a New Mechanistic Perspective.

Authors:  Subrata Dutta; Thomas S Finn; Ariel J Kuhn; Benjamin Abrams; Jevgenij A Raskatov
Journal:  Chembiochem       Date:  2019-02-27       Impact factor: 3.164

6.  Using a FRET Library with Multiple Probe Pairs To Drive Monte Carlo Simulations of α-Synuclein.

Authors:  John J Ferrie; Conor M Haney; Jimin Yoon; Buyan Pan; Yi-Chih Lin; Zahra Fakhraai; Elizabeth Rhoades; Abhinav Nath; E James Petersson
Journal:  Biophys J       Date:  2018-01-09       Impact factor: 4.033

7.  A "Clickable" Photoconvertible Small Fluorescent Molecule as a Minimalist Probe for Tracking Individual Biomolecule Complexes.

Authors:  Joomyung V Jun; Conor M Haney; Richard J Karpowicz; Sam Giannakoulias; Virginia M-Y Lee; E James Petersson; David M Chenoweth
Journal:  J Am Chem Soc       Date:  2019-01-28       Impact factor: 15.419

8.  Fluorescence imaging of amyloid formation in living cells by a functional, tetracysteine-tagged alpha-synuclein.

Authors:  María J Roberti; Carlos W Bertoncini; Reinhard Klement; Elizabeth A Jares-Erijman; Thomas M Jovin
Journal:  Nat Methods       Date:  2007-03-11       Impact factor: 28.547

9.  Correlation between Cellular Uptake and Cytotoxicity of Fragmented α-Synuclein Amyloid Fibrils Suggests Intracellular Basis for Toxicity.

Authors:  Xiaolu Zhang; Emelie Wesén; Ranjeet Kumar; David Bernson; Audrey Gallud; Alexandra Paul; Pernilla Wittung-Stafshede; Elin K Esbjörner
Journal:  ACS Chem Neurosci       Date:  2020-01-08       Impact factor: 4.418

10.  The conformational ensembles of α-synuclein and tau: combining single-molecule FRET and simulations.

Authors:  Abhinav Nath; Maria Sammalkorpi; David C DeWitt; Adam J Trexler; Shana Elbaum-Garfinkle; Corey S O'Hern; Elizabeth Rhoades
Journal:  Biophys J       Date:  2012-11-07       Impact factor: 4.033

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  2 in total

Review 1.  Deciphering the Structure and Formation of Amyloids in Neurodegenerative Diseases With Chemical Biology Tools.

Authors:  Isabelle Landrieu; Elian Dupré; Davy Sinnaeve; Léa El Hajjar; Caroline Smet-Nocca
Journal:  Front Chem       Date:  2022-05-12       Impact factor: 5.545

2.  High-fidelity imaging of amyloid-beta deposits with an ultrasensitive fluorescent probe facilitates the early diagnosis and treatment of Alzheimer's Disease.

Authors:  Rongrong Tao; Ning Wang; Tianruo Shen; Yuhang Tan; Yong Ren; Wenjing Wei; Meihua Liao; Davin Tan; Chunzhi Tang; Nenggui Xu; Huan Wang; Xiaogang Liu; Xin Li
Journal:  Theranostics       Date:  2022-02-28       Impact factor: 11.600

  2 in total

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