| Literature DB >> 30656179 |
Naomi Nevler1, Sharon Ash1, David J Irwin1, Mark Liberman2, Murray Grossman1.
Abstract
Objective: To automatically extract and quantify specific disease biomarkers of prosody from the acoustic properties of speech in patients with primary progressive aphasia.Entities:
Mesh:
Substances:
Year: 2018 PMID: 30656179 PMCID: PMC6331511 DOI: 10.1002/acn3.653
Source DB: PubMed Journal: Ann Clin Transl Neurol ISSN: 2328-9503 Impact factor: 4.511
Mean (SD) demographic characteristics of patients and controls
| HC | naPPA | lvPPA | svPPA |
| |
|---|---|---|---|---|---|
|
| 31 | 15 | 23 | 21 | |
| Age, y | 69.29 (7.90) | 69.67 (9.20) | 65.91 (9.83) | 64.48 (7.71) | 0.14 |
| Sex = Male (%) | 11 (35.5) | 6 (40.0) | 7 (30.4) | 10 (47.6) | 0.68 |
| Education, y | 15.97 (2.58) | 14.80 (3.12) | 15.35 (3.19) | 15.10 (2.81) | 0.56 |
| Disease duration, y | NA | 2.60 (1.12) | 4.00 (2.00) | 4.05 (2.04) | 0.04 |
| MMSE total (0‐30), | 29.00 (1.07) | 24.73 (5.24) | 23.05 (5.72) | 23.05 (6.11) | <0.001 |
| PBAC Naming (0‐6), | 5.50 (0.71) | 5.78 (0.67) | 4.00 (1.83) | 1.23 (1.48) | <0.001 |
| F letter fluency, | 17.75 (8.10) | 6.33 (3.04) | 6.36 (5.40) | 8.21 (3.96) | 0.001 |
| Digit span forward, | 7.00 (1.37) | 5.61 (1.30) | 4.45 (1.54) | 6.06 (1.89) | <0.001 |
| Digit span backward, | 5.65 (1.31) | 2.64 (1.11) | 2.91 (1.08) | 3.78 (1.70) | <0.001 |
| Category fluency | 19.67 (6.48) | 10.11 (5.09) | 9.85 (5.94) | 5.36 (4.67) | <0.001 |
| Total speech time | 49.66 (18.23) | 33.78 (18.53) | 38.54 (15.02) | 36.42 (13.85) | 0.006 |
| Total word count | 166.32 (63.90) | 65.80 (37.06) | 114.13 (56.80) | 134.05 (55.99) | <0.001 |
| Speech rate, wpm | 140.06 (36.74) | 61.00 (24.85) | 88.17 (36.09) | 113.95 (40.76) | <0.001 |
| MLU (words) | 10.57 (1.98) | 6.74 (2.38) | 8.46 (2.45) | 8.61 (2.75) | <0.001 |
| DC/utterance | 0.37 (0.23) | 0.05 (0.09) | 0.21 (0.21) | 0.32 (0.27) | <0.001 |
| WFS/utterance | 0.91 (0.11) | 0.72 (0.32) | 0.71 (0.25) | 0.78 (0.19) | 0.003 |
wpm, words per minute; MLU, mean length of utterance; DC, dependent clauses; WFS, well‐formed sentences; PBAC, Philadelphia Brief Assessment of Cognition.
MMSE total score did not differ between patient groups.
This refers to the sum of all subject's speech segment durations, including verbal and nonverbal vocalizations, all available for pitch‐tracking.
This manual word count includes only verbal vocalizations that were comprehensible enough for transcription.
Category = animals
Data refer to the average number of clauses per utterance.
Figure 1f0 and durations data. (A) f0 percentiles by clinical phenotype, expressed in semitones (ST). The 90th percentile represents the f0 range. (B) Pause rate, calculated as the number of pauses per minute of speech time. (C) Mean speech duration. (D) Silent pause mean duration. f0, fundamental frequency; ST, semitones; HC, healthy controls; lvPPA, logopenic variant Primary progressive aphasia; naPPA, non‐fluent/agrammatic primary progressive aphasia; svPPA, semantic variant primary progressive aphasia; sec, seconds; ppm, pauses per minute.
Figure 2Correlations of automated measures with manual coding. A–D Correlations of automatically extracted pause rate with manually coded measures of fluency and grammaticality. E–H Correlations of automatically extracted mean speech segment duration with manual coding. The mirror image between the upper and lower panels coincides with the strong negative correlation between speech duration and pause rate (see text). lvPPA, logopenic variant primary progressive aphasia; naPPA, non‐fluent/agrammatic primary progressive aphasia; svPPA, semantic variant primary progressive aphasia; sec, seconds; ppm, pauses per minute; wpm, words per minute; WFS, well‐formed sentences; DC, dependent clauses.
Results of polynomial logistic regression
| f0 range | Pause rate | |||||
|---|---|---|---|---|---|---|
| OR | 95% CI |
| OR | 95% CI |
| |
| naPPA | 0.35 | 0.18–0.69 |
| 1.18 | 1.10–1.26 |
|
| lvPPA | 0.82 | 0.54–1.26 | 0.37 | 1.17 | 1.10–1.24 |
|
| svPPA | 1.09 | 0.77–1.18 | 0.62 | 1.11 | 1.05–1.18 |
|
Significant P values are in bold.
Figure 3ROC analyses. (A) f0 range and pause rate as single classifiers for receiver operating characteristic (ROC) curve of naPPA vs. HC. A combined acoustic classifier (pause rate/f0 range) improves AUC (0.94). (B) Combined acoustic parameter (pause rate/f0 range) as classifier for naPPA vs. other phenotypes. AUC, area under the curve; HC, healthy controls; lvPPA, logopenic variant primary progressive aphasia; naPPA, non‐fluent/agrammatic primary progressive aphasia; svPPA, semantic variant primary progressive aphasia; ROC, receiver operating curves.
Figure 4CSF p‐Tau correlation with combined acoustic marker. Pearson correlation showing linear association between the natural logarithm of CSF p‐Tau levels and the natural logarithm of the combined acoustic marker (r = 0.58, P = 0.007). lvPPA, logopenic variant primary progressive aphasia; naPPA, non‐fluent/agrammatic primary progressive aphasia; svPPA, semantic variant primary progressive aphasia.