Literature DB >> 30617132

The sTRA Plasma Biomarker: Blinded Validation of Improved Accuracy Over CA19-9 in Pancreatic Cancer Diagnosis.

Ben Staal1, Ying Liu1, Daniel Barnett1,2, Peter Hsueh1,2, Zonglin He3, ChongFeng Gao1, Katie Partyka1, Mark W Hurd4, Aatur D Singhi5, Richard R Drake6, Ying Huang3, Anirban Maitra4, Randall E Brand5, Brian B Haab7.   

Abstract

PURPOSE: The CA19-9 biomarker is elevated in a substantial group of patients with pancreatic ductal adenocarcinoma (PDAC), but not enough to be reliable for the detection or diagnosis of the disease. We hypothesized that a glycan called sTRA (sialylated tumor-related antigen) is a biomarker for PDAC that improves upon CA19-9. EXPERIMENTAL
DESIGN: We examined sTRA and CA19-9 expression and secretion in panels of cell lines, patient-derived xenografts, and primary tumors. We developed candidate biomarkers from sTRA and CA19-9 in a training set of 147 plasma samples and used the panels to make case-control calls, based on predetermined thresholds, in a 50-sample validation set and a blinded, 147-sample test set.
RESULTS: The sTRA glycan was produced and secreted by pancreatic tumors and models that did not produce and secrete CA19-9. Two biomarker panels improved upon CA19-9 in the training set, one optimized for specificity, which included CA19-9 and 2 versions of the sTRA assay, and another optimized for sensitivity, which included 2 sTRA assays. Both panels achieved statistical improvement (P < 0.001) over CA19-9 in the validation set, and the specificity-optimized panel achieved statistical improvement (P < 0.001) in the blinded set: 95% specificity and 54% sensitivity (75% accuracy), compared with 97%/30% (65% accuracy). Unblinding produced further improvements and revealed independent, complementary contributions from each marker.
CONCLUSIONS: sTRA is a validated serological biomarker of PDAC that yields improved performance over CA19-9. The new panels may enable surveillance for PDAC among people with elevated risk, or improved differential diagnosis among patients with suspected pancreatic cancer. ©2019 American Association for Cancer Research.

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Year:  2019        PMID: 30617132      PMCID: PMC7246054          DOI: 10.1158/1078-0432.CCR-18-3310

Source DB:  PubMed          Journal:  Clin Cancer Res        ISSN: 1078-0432            Impact factor:   12.531


  40 in total

1.  Identification of blood-protein carriers of the CA 19-9 antigen and characterization of prevalence in pancreatic diseases.

Authors:  Tingting Yue; Katie Partyka; Kevin A Maupin; Mary Hurley; Philip Andrews; Karen Kaul; A James Moser; Herbert Zeh; Randall E Brand; Brian B Haab
Journal:  Proteomics       Date:  2011-08-02       Impact factor: 3.984

2.  Upregulation of glycans containing 3' fucose in a subset of pancreatic cancers uncovered using fusion-tagged lectins.

Authors:  Sudhir Singh; Kuntal Pal; Jessica Yadav; Huiyuan Tang; Katie Partyka; Doron Kletter; Peter Hsueh; Elliot Ensink; Birendra Kc; Galen Hostetter; H Eric Xu; Marshall Bern; David F Smith; Anand S Mehta; Randall Brand; Karsten Melcher; Brian B Haab
Journal:  J Proteome Res       Date:  2015-05-12       Impact factor: 4.466

3.  Matrix assisted laser desorption ionization imaging mass spectrometry workflow for spatial profiling analysis of N-linked glycan expression in tissues.

Authors:  Thomas W Powers; E Ellen Jones; Lucy R Betesh; Patrick R Romano; Peng Gao; John A Copland; Anand S Mehta; Richard R Drake
Journal:  Anal Chem       Date:  2013-10-03       Impact factor: 6.986

4.  Combined circulating tumor DNA and protein biomarker-based liquid biopsy for the earlier detection of pancreatic cancers.

Authors:  Joshua D Cohen; Ammar A Javed; Christopher Thoburn; Fay Wong; Jeanne Tie; Peter Gibbs; C Max Schmidt; Michele T Yip-Schneider; Peter J Allen; Mark Schattner; Randall E Brand; Aatur D Singhi; Gloria M Petersen; Seung-Mo Hong; Song Cheol Kim; Massimo Falconi; Claudio Doglioni; Matthew J Weiss; Nita Ahuja; Jin He; Martin A Makary; Anirban Maitra; Samir M Hanash; Marco Dal Molin; Yuxuan Wang; Lu Li; Janine Ptak; Lisa Dobbyn; Joy Schaefer; Natalie Silliman; Maria Popoli; Michael G Goggins; Ralph H Hruban; Christopher L Wolfgang; Alison P Klein; Cristian Tomasetti; Nickolas Papadopoulos; Kenneth W Kinzler; Bert Vogelstein; Anne Marie Lennon
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-05       Impact factor: 11.205

5.  Colorectal carcinoma-specific antigen: detection by means of monoclonal antibodies.

Authors:  M Herlyn; Z Steplewski; D Herlyn; H Koprowski
Journal:  Proc Natl Acad Sci U S A       Date:  1979-03       Impact factor: 11.205

6.  Identification of potential pancreatic cancer serum markers: Increased sialyl-Lewis X on ceruloplasmin.

Authors:  Meritxell Balmaña; Ariadna Sarrats; Esther Llop; Sílvia Barrabés; Radka Saldova; María José Ferri; Joan Figueras; Esther Fort; Rafael de Llorens; Pauline M Rudd; Rosa Peracaula
Journal:  Clin Chim Acta       Date:  2015-01-14       Impact factor: 3.786

Review 7.  The clinical utility of the CA 19-9 tumor-associated antigen.

Authors:  W Steinberg
Journal:  Am J Gastroenterol       Date:  1990-04       Impact factor: 10.864

8.  A monoclonal antibody-defined antigen associated with gastrointestinal cancer is a ganglioside containing sialylated lacto-N-fucopentaose II.

Authors:  J L Magnani; B Nilsson; M Brockhaus; D Zopf; Z Steplewski; H Koprowski; V Ginsburg
Journal:  J Biol Chem       Date:  1982-12-10       Impact factor: 5.157

9.  Definitive Characterization of CA 19-9 in Resectable Pancreatic Cancer Using a Reference Set of Serum and Plasma Specimens.

Authors:  Brian B Haab; Ying Huang; Seetharaman Balasenthil; Katie Partyka; Huiyuan Tang; Michelle Anderson; Peter Allen; Aaron Sasson; Herbert Zeh; Karen Kaul; Doron Kletter; Shaokui Ge; Marshall Bern; Richard Kwon; Ivan Blasutig; Sudhir Srivastava; Marsha L Frazier; Subrata Sen; Michael A Hollingsworth; Jo Ann Rinaudo; Ann M Killary; Randall E Brand
Journal:  PLoS One       Date:  2015-10-02       Impact factor: 3.240

10.  Glycans related to the CA19-9 antigen are elevated in distinct subsets of pancreatic cancers and improve diagnostic accuracy over CA19-9.

Authors:  Huiyuan Tang; Katie Partyka; Peter Hsueh; Jessica Y Sinha; Doron Kletter; Herbert Zeh; Ying Huang; Randall E Brand; Brian B Haab
Journal:  Cell Mol Gastroenterol Hepatol       Date:  2016-02-01
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  15 in total

1.  Automated Identification and Quantification of Signals in Multichannel Immunofluorescence Images: The SignalFinder-IF Platform.

Authors:  Daniel Barnett; Johnathan Hall; Brian Haab
Journal:  Am J Pathol       Date:  2019-04-23       Impact factor: 4.307

2.  An Integrated Workflow for Global, Glyco-, and Phospho-proteomic Analysis of Tumor Tissues.

Authors:  Yangying Zhou; Tung-Shing Mamie Lih; Ganglong Yang; Shao-Yung Chen; Lijun Chen; Daniel W Chan; Hui Zhang; Qing Kay Li
Journal:  Anal Chem       Date:  2020-01-03       Impact factor: 6.986

Review 3.  Applications and continued evolution of glycan imaging mass spectrometry.

Authors:  Colin T McDowell; Xiaowei Lu; Anand S Mehta; Peggi M Angel; Richard R Drake
Journal:  Mass Spectrom Rev       Date:  2021-08-15       Impact factor: 10.946

Review 4.  Artificial Intelligence and Early Detection of Pancreatic Cancer: 2020 Summative Review.

Authors:  Barbara Kenner; Suresh T Chari; David Kelsen; David S Klimstra; Stephen J Pandol; Michael Rosenthal; Anil K Rustgi; James A Taylor; Adam Yala; Noura Abul-Husn; Dana K Andersen; David Bernstein; Søren Brunak; Marcia Irene Canto; Yonina C Eldar; Elliot K Fishman; Julie Fleshman; Vay Liang W Go; Jane M Holt; Bruce Field; Ann Goldberg; William Hoos; Christine Iacobuzio-Donahue; Debiao Li; Graham Lidgard; Anirban Maitra; Lynn M Matrisian; Sung Poblete; Laura Rothschild; Chris Sander; Lawrence H Schwartz; Uri Shalit; Sudhir Srivastava; Brian Wolpin
Journal:  Pancreas       Date:  2021-03-01       Impact factor: 3.243

5.  Phage Display Selection, Identification, and Characterization of Novel Pancreatic Cancer Targeting Peptides.

Authors:  Mallika C Asar; April Franco; Mette Soendergaard
Journal:  Biomolecules       Date:  2020-05-05

6.  Detection of Chemotherapy-resistant Pancreatic Cancer Using a Glycan Biomarker, sTRA.

Authors:  ChongFeng Gao; Luke Wisniewski; Ying Liu; Ben Staal; Ian Beddows; Dennis Plenker; Mohammed Aldakkak; Johnathan Hall; Daniel Barnett; Mirna Kheir Gouda; Peter Allen; Richard Drake; Amer Zureikat; Ying Huang; Douglas Evans; Aatur Singhi; Randall E Brand; David A Tuveson; Susan Tsai; Brian B Haab
Journal:  Clin Cancer Res       Date:  2020-10-22       Impact factor: 13.801

Review 7.  Identification of a competing endogenous RNA network associated with prognosis of pancreatic adenocarcinoma.

Authors:  Wanqing Weng; Zhongjing Zhang; Weiguo Huang; Xiangxiang Xu; Boda Wu; Tingbo Ye; Yunfeng Shan; Keqing Shi; Zhuo Lin
Journal:  Cancer Cell Int       Date:  2020-06-11       Impact factor: 5.722

8.  Predictive value of CONUT score combined with serum CA199 levels in postoperative survival of patients with pancreatic ductal adenocarcinoma: a retrospective study.

Authors:  Ankang Wang; Bo Sun; Min Wang; Hao Shi; Zhiwei Huang; Tao He; Qiu Li; Jiaqi Deng; Wenguang Fu; Yu Jiang
Journal:  PeerJ       Date:  2020-03-18       Impact factor: 2.984

9.  Identification of Serum microRNA-25 as a novel biomarker for pancreatic cancer.

Authors:  Yiwen Yu; Ying Tong; Ailing Zhong; Yanchun Wang; Renquan Lu; Lin Guo
Journal:  Medicine (Baltimore)       Date:  2020-12-24       Impact factor: 1.817

10.  Biomarkers and Strategy to Detect Preinvasive and Early Pancreatic Cancer: State of the Field and the Impact of the EDRN.

Authors:  Ying Liu; Sukhwinder Kaur; Ying Huang; Johannes F Fahrmann; Jo Ann Rinaudo; Samir M Hanash; Surinder K Batra; Aatur D Singhi; Randall E Brand; Anirban Maitra; Brian B Haab
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2020-06-12       Impact factor: 4.254

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