| Literature DB >> 30615688 |
Nicole Brenner1,2, Alexander J Mentzer3,4, Julia Butt1, Kathrin L Braband1, Angelika Michel1, Katie Jeffery5, Paul Klenerman5,6, Barbara Gärtner7, Paul Schnitzler8, Adrian Hill3,9, Graham Taylor10, Maria A Demontis10, Edward Guy11, Stephen J Hadfield11, Rachael Almond12, Naomi Allen12,13, Michael Pawlita14, Tim Waterboer1.
Abstract
Multiplex Serology is a high-throughput technology developed to simultaneously measure specific serum antibodies against multiple pathogens in one reaction vessel. Serological assays for hepatitis B (HBV) and C (HCV) viruses, human T-lymphotropic virus 1 (HTLV-1) and the protozoan parasite Toxoplasma gondii (T. gondii) were developed and validated against established reference assays. For each pathogen, between 3 and 5 specific antigens were recombinantly expressed as GST-tag fusion proteins in Escherichia coli and tested in Monoplex Serology, i.e. assays restricted to the antigens from one particular pathogen. For each of the four pathogen-specific Monoplex assays, overall seropositivity was defined using two pathogen-specific antigens. In the case of HBV Monoplex Serology, the detection of past natural HBV infection was validated based on two independent reference panels resulting in sensitivities of 92.3% and 93.0%, and specificities of 100% in both panels. Validation of HCV and HTLV-1 Monoplex Serology resulted in sensitivities of 98.0% and 95.0%, and specificities of 96.2% and 100.0%, respectively. The Monoplex Serology assay for T. gondii was validated with a sensitivity of 91.2% and specificity of 92.0%. The developed Monoplex Serology assays largely retained their characteristics when they were included in a multiplex panel (i.e. Multiplex Serology), containing additional antigens from a broad range of other pathogens. Thus HBV, HCV, HTLV-1 and T. gondii Monoplex Serology assays can efficiently be incorporated into Multiplex Serology panels tailored for application in seroepidemiological studies.Entities:
Mesh:
Substances:
Year: 2019 PMID: 30615688 PMCID: PMC6322760 DOI: 10.1371/journal.pone.0210407
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Characteristics of selected pathogen-specific serology antigens.
| pathogen-specific antigen | function | GST-X-tag fusion protein | aa | codon optimized | DNA template / accession no. Uniprot | NCBI reference (nucleotide range) | |
|---|---|---|---|---|---|---|---|
| HBc | core antigen | yes | 1–185 | B | - | HBV 1.28x genome (genotype A, subtype adw2) | |
| HBe | soluble nucleocapsid associated antigen | yes | 20–179 | B | - | KY003230.1 | |
| HBs | surface antigen | yes | 99–169 | B | X | Q17UT6 | - |
| HBs from | surface antigen | no | - | - | - | - | - |
| recombinant | surface antigen | no | - | - | - | - | - |
| HBs VLP | surface antigen | no | - | - | - | - | - |
| Core | structural antigen | yes | full length | R | - | pCV-H77 | - |
| NS3 | protease and RNA helicase activity | yes | R | - | - | ||
| NS4A | cofactor for NS3 | yes | B | - | - | ||
| NS5A | phosphoprotein, virus assembly | yes | B | - | - | ||
| NS5B | RNA-dependent RNA polymerase | yes | R | - | - | ||
| gag | structural antigen | yes | 1–429 | R | - | isolate MT-2 | X15951.1 |
| env | structural antigen | yes | 21–312 | B | - | X56949.2 | |
| tax | regulatory protein | yes | 1–353 | B | - | AAF71373.1 | |
| rex | regulatory protein | yes | 1–372 | B | - | AF033817.1 | |
| HBZ | regulatory protein | yes | 1–206 | R | - | BAX34773.1 | |
| sag1 | surface antigen | yes | 31–349 | B | - | DNA extracted from parasites (strain ME49) | XP_002368205.2 |
| p22 | surface antigen | yes | 27–187 | R | - | XM_018781602.1 | |
| bag1 | bradyzoite specific protein | yes | exons 1–4 (229 aa) | B | X | Q27354 | - |
1T. gondii bag-1 and HBV HBs expression plasmids were obtained via gene synthesis and sequence identity confirmed by manufacturer.
2 kindly provided by C-T. Bock, Robert Koch Institute, Berlin, cloned from pHBV-1.2 containing synthetic HBV 1.28x genome (AF305422; HBV A adw2).
3 transmembrane domain / signal peptide excluded
4 sequence was reported to be the major hydrophilic region and to harbour B-cell epitopes
5 HBs from human plasma, HBsAG (ad) protein (Fitzgerald Industries International, Acton, USA; Cat.No: 30-AH16U 0.9 mg/ml, >95% pure)
6 HBs expressed from Saccharomyces cerevisiae (BIO TREND, Destin, USA)
7 kindly provided by A. Hill (The Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK; The Jenner Institute, University of Oxford, Oxford, UK)
8 details on antigens were previously published by Dondog et al. [38]
9 exclusion of leader peptide and gp21 (starts after cleavage site at aa 312–313)
10 obtained from Biotech Research Laboratories, Rockville, Maryland, USA, provirus genome from T-cell leukemia cell line MT-2
11 no NCBI reference sequence for HTLV-1 strain MT-2 available
12 kindly provided by U. Groß and W. Bohne, Institute for Medical Microbiology, University of Göttingen, Germany
* Antigens were recombinantly expressed in E.coli as GST-X-tag fusion proteins with an N-terminal GST and a C-terminal SV40 tag (last 11 aa of large T-antigen).
** Upon alignment with the NCBI / Uniprot amino acid sequences the following deviations were observed. HTLV-1 rex: K212E, A240V, L362P; T. gondii bag-1: P3L
aa: amino acids
B: E. coli strain BL21
R: E. coli strain BL21 Rosetta
Characteristics of reference serum panels.
| pathogen | provider | panel | n Ref+ | n Ref- | reference assay |
|---|---|---|---|---|---|
| HBV | B. Gärtner (Institut für Mikrobiologie und Hygiene, Saarland University Hospital, Homburg, Germany) | Ia | 91 | 139 | ARCHITECT anti-HBc (Abbott Laboratories, Abbott Park, USA) |
| HBV | K. Jeffery (Oxford University Hospitals NHS Trust, Department of Microbiology) | Ib | 57 | 100 | ARCHITECT anti-HBc II (Abbott Laboratories) |
| HCV | K. Jeffery | II | 50 | 104 | ARCHITECT Anti-HCV (Abbott Laboratories), confirmatory ELISA Murex anti-HCV (Diasorin, Saluggia, Italy) |
| HTLV-1 | G. Taylor (Imperial College Healthcare NHS Trust, Molecular Diagnostic Unit) | III | 100 | 100 | ARCHITECT rHTLV-I/II (Abbott Laboratories), confirmation and typing by Genelabs Diagnositics HTLV 2.4 assay (Genelabs, Redwood City, USA) |
| E. Guy (Public Health Wales Microbiology, Toxoplasma Reference Unit) | IV | 148 | 50 | Sabin-Feldman dye test | |
| HBV anti-HBs | B. Gärtner | Va | 90 | 135 | ARCHITECT anti-HBs (Abbott Laboratories) |
| P. Schnitzler (Center for Infectious Diseases, Virology, University Hospital of Heidelberg, Heidelberg, Germany) | Vb | 55 | 54 | ARCHITECT AUSAB (Abbott Laboratories) | |
| Vc | 72 | 64 | ADVIA Centaur Anti-HBs2 (Siemens Healthcare Diagnostics Inc., Tarrytown, NY, USA) |
n Ref+: number of reference assay positives
n Ref-: number of reference assay negatives
* Determined by double seropositivity to the ARCHITECT Anti-HCV and the Murex anti-HCV assay.
** Including 4 sera classified as false-positive by the confirmatory assay (single positive to ARCHITECT Anti-HCV assay). These sera were classified as HCV reference serostatus negative in statistical analysis.
*** Serum panel overlaps with reference panel Ia.
Fig 1Comparison of quantitative antibody measurements (MFI) with reference serostatus in pathogen-specific Monoplex Serology for HBV (Ia, Ib), HCV (II), HTLV-1 (III) and T. gondii (IV).
Ia, Ib, II-IV indicate corresponding reference panels. red lines: optimized cut-offs for single antigen performance; cut-offs were determined by optimizing specificity and sensitivity analogous to Receiver Operator Characteristics analysis. No cut-offs were determined for antigens that showed a reduced capacity to distinguish between reference assay positives and negatives. MFI: Median Fluorescence Intensities.
Single antigen performance in Monoplex Serology in corresponding reference panels.
| RP | antigen | cut -off | specificity (95% CI) | sensitivity (95% CI) | |
|---|---|---|---|---|---|
| Ia | HBV | ||||
| HBe | 30 | 98.6 (94.9–99.8) | 92.3 (84.8–96.9) | 0.92 (0.86–0.97) | |
| HBc | 30 | 100.0 (97.4–100.0) | 93.4 (86.2–97.5) | 0.94 (0.90–0.99) | |
| Ib | HBV | ||||
| HBe | 90 | 99.0 (99.5–100.0) | 93.0 (83.0–98.1) | 0.93 (0.87–0.99) | |
| HBc | 110 | 100.0 (96.4–100.0) | 93.0 (83.0–98.1) | 0.94 (0.89–1.00) | |
| II | HCV | ||||
| Core | 100 | 98.1 (93.2–99.8) | 84.0 (70.9–92.8) | 0.85 (0.76–0.94) | |
| NS3 | 40 | 98.1 (93.2–99.8) | 98.0 (89.4–100.0) | 0.96 (0.91–1.00) | |
| III | HTLV-1 | ||||
| gag | 30 | 97.0 (91.5–99.4) | 96.0 (90.1–98.9) | 0.93 (0.88–0.98) | |
| env | 32 | 100.0 (96.4–100.0) | 88.0 (80.0–93.6) | 0.88 (0.81–0.95) | |
| tax | 30 | 100.0 (96.4–100.0) | 81.0 (71.9–88.2) | 0.81 (0.73–0.89) | |
| rex | 30 | 92.0 (84.8–96.5) | 83.0 (74.2–89.8) | 0.75 (0.66–0.84) | |
| IV | T. gondii | ||||
| p22 | 50 | 86.0 (73.3–94.2) | 92.6 (87.1–96.2) | 0.77 (0.66–0.87) | |
| sag1 | 65 | 86.0 (73.3–94.2) | 84.5 (77.6–89.9) | 0.64 (0.52–0.75) |
1 cut-offs determined optimizing specificity and sensitivity analogous to Receiver Operator Characteristics analysis
CI: confidence interval
RP: Reference panel
MFI: median fluorescence intensity
Overall pathogen-specific statistical performance in Monoplex Serology in corresponding reference panels.
| RP | pathogen | antigen | cut -off | algorithm | specificity | sensitivity | |
|---|---|---|---|---|---|---|---|
| Ia | HBV | HBe | 30 | AND | 100.0 (97.4–100.0) | 92.3 (84.8–96.9) | 0.94 (0.89–0.98) |
| HBc | 30 | ||||||
| Ib | HBV | HBe | 90 | AND | 100.0 (96.4–100.0) | 93.0 (83.0–98.1) | 0.94 (0.89–100.0) |
| HBc | 110 | ||||||
| II | HCV | Core | 100 | AND / OR | 96.2 (90.4–98.9) | 98.0 (89.4–100.0) | 0.93 (0.86–0.99) |
| NS3 | 40 | ||||||
| Core | 30 | AND | 100.0 (96.5–100.0) | 84.0 (70.9–92.8) | 0.88 (0.79–0.96) | ||
| NS3 | 30 | ||||||
| III | HTLV-1 | gag | 50 | AND / OR | 100 (96.4–100.0) | 94.0 (87.4–97.8) | 0.94 (0.89–0.99) |
| env | 50 | ||||||
| IV | p22 | 77 | AND / OR | 92.0 (80.8–97.8) | 91.2 (85.5–95.2) | 0.79 (0.69–0.88) | |
| sag1 | 100 |
1 cut-offs determined by optimizing specificity and sensitivity
CI: confidence interval
RP: Reference panel
MFI: median fluorescence intensity
Fig 2Statistical performance of pathogen-specific assays (overall seropositivity to HBV, HCV (AND/OR), HTLV-1, T. gondii) in monoplex (blue) and multiplex (orange) format.
To enhance visualization, Cohen’s kappa statistics are illustrated as percentages. Sensitivity, specificity and Cohen’s kappa statistics are illustrated by boxes while the corresponding 95% CI is indicated by horizontal lines. Performance of Monoplex and Multiplex Serology was directly compared on the corresponding reference panel using ICCs. The comparison yielded moderate to excellent reliability between monoplex and multiplex format: ICCHBV RPIa: 0.94 (95% CI 0.92–0.95), ICCHBV RPIb: 0.97 (95% CI 0.96–0.98), ICCHCV: 0.97 (95% CI 0.96–0.98), ICCHTLV-1: 0.94 (95% CI 0.92–0.95), ICC: 0.69 (95% CI 0.61–0.76). kappa: Cohen’s kappa. ICC: Intraclass correlation coefficient. CI: confidence interval. RP: reference panel.