Literature DB >> 30602726

Chromatin regulatory mechanisms and therapeutic opportunities in cancer.

Alfredo M Valencia1,2,3, Cigall Kadoch4,5.   

Abstract

Research over the past several decades has unmasked a major contribution of disrupted chromatin regulatory processes to human disease, particularly cancer. Advances in genome-wide technologies have highlighted frequent mutations in genes encoding chromatin-associated proteins, identified unexpected synthetic lethal opportunities and enabled increasingly comprehensive structural and functional dissection. Here, we review recent progress in our understanding of oncogenic mechanisms at each level of chromatin organization and regulation, and discuss new strategies towards therapeutic intervention.

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Year:  2019        PMID: 30602726      PMCID: PMC6755910          DOI: 10.1038/s41556-018-0258-1

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN: 1465-7392            Impact factor:   28.824


  139 in total

Review 1.  The H1 linker histones: multifunctional proteins beyond the nucleosomal core particle.

Authors:  Sonja P Hergeth; Robert Schneider
Journal:  EMBO Rep       Date:  2015-10-15       Impact factor: 8.807

Review 2.  The biology of chromatin remodeling complexes.

Authors:  Cedric R Clapier; Bradley R Cairns
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

Review 3.  Function and information content of DNA methylation.

Authors:  Dirk Schübeler
Journal:  Nature       Date:  2015-01-15       Impact factor: 49.962

Review 4.  Histone exchange, chromatin structure and the regulation of transcription.

Authors:  Swaminathan Venkatesh; Jerry L Workman
Journal:  Nat Rev Mol Cell Biol       Date:  2015-02-04       Impact factor: 94.444

5.  A blueprint for an international cancer epigenome consortium. A report from the AACR Cancer Epigenome Task Force.

Authors:  Stephan Beck; Bradley E Bernstein; Robert M Campbell; Joseph F Costello; Dashyant Dhanak; Joseph R Ecker; John M Greally; Jean-Pierre Issa; Peter W Laird; Kornelia Polyak; Benjamin Tycko; Peter A Jones
Journal:  Cancer Res       Date:  2012-11-27       Impact factor: 12.701

Review 6.  TET enzymes, TDG and the dynamics of DNA demethylation.

Authors:  Rahul M Kohli; Yi Zhang
Journal:  Nature       Date:  2013-10-24       Impact factor: 49.962

Review 7.  Histone Modifications and Cancer.

Authors:  James E Audia; Robert M Campbell
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-04-01       Impact factor: 10.005

Review 8.  Emerging roles of linker histones in regulating chromatin structure and function.

Authors:  Dmitry V Fyodorov; Bing-Rui Zhou; Arthur I Skoultchi; Yawen Bai
Journal:  Nat Rev Mol Cell Biol       Date:  2017-10-11       Impact factor: 94.444

Review 9.  Histone core modifications regulating nucleosome structure and dynamics.

Authors:  Peter Tessarz; Tony Kouzarides
Journal:  Nat Rev Mol Cell Biol       Date:  2014-10-15       Impact factor: 94.444

10.  Cell-of-origin chromatin organization shapes the mutational landscape of cancer.

Authors:  Paz Polak; Rosa Karlić; Amnon Koren; Robert Thurman; Richard Sandstrom; Michael Lawrence; Alex Reynolds; Eric Rynes; Kristian Vlahoviček; John A Stamatoyannopoulos; Shamil R Sunyaev
Journal:  Nature       Date:  2015-02-19       Impact factor: 49.962

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  57 in total

1.  Mammalian SWI/SNF Complex Genomic Alterations and Immune Checkpoint Blockade in Solid Tumors.

Authors:  Sarah Abou Alaiwi; Amin H Nassar; Wanling Xie; Ziad Bakouny; Jacob E Berchuck; David A Braun; Sylvan C Baca; Pier Vitale Nuzzo; Ronan Flippot; Tarek H Mouhieddine; Liam F Spurr; Yvonne Y Li; Taiwen Li; Abdallah Flaifel; John A Steinharter; Claire A Margolis; Natalie I Vokes; Heng Du; Sachet A Shukla; Andrew D Cherniack; Guru Sonpavde; Robert I Haddad; Mark M Awad; Marios Giannakis; F Stephen Hodi; X Shirley Liu; Sabina Signoretti; Cigall Kadoch; Matthew L Freedman; David J Kwiatkowski; Eliezer M Van Allen; Toni K Choueiri
Journal:  Cancer Immunol Res       Date:  2020-04-22       Impact factor: 11.151

Review 2.  Regulation of breast cancer metastasis signaling by miRNAs.

Authors:  Belinda J Petri; Carolyn M Klinge
Journal:  Cancer Metastasis Rev       Date:  2020-09       Impact factor: 9.264

3.  First-in-Class Inhibitors of Oncogenic CHD1L with Preclinical Activity against Colorectal Cancer.

Authors:  Joshua M Abbott; Qiong Zhou; Hector Esquer; Laura Pike; Travis P Broneske; Sébastien Rinaldetti; Adedoyin D Abraham; Dominique A Ramirez; Paul J Lunghofer; Todd M Pitts; Daniel P Regan; Aik Choon Tan; Daniel L Gustafson; Wells A Messersmith; Daniel V LaBarbera
Journal:  Mol Cancer Ther       Date:  2020-06-04       Impact factor: 6.261

4.  Chromatin modified in a molecular reaction chamber.

Authors:  Nick Gilbert; Fred van Leeuwen
Journal:  Nature       Date:  2020-03       Impact factor: 49.962

5.  BICRA, a SWI/SNF Complex Member, Is Associated with BAF-Disorder Related Phenotypes in Humans and Model Organisms.

Authors:  Scott Barish; Tahsin Stefan Barakat; Brittany C Michel; Nazar Mashtalir; Jennifer B Phillips; Alfredo M Valencia; Berrak Ugur; Jeremy Wegner; Tiana M Scott; Brett Bostwick; David R Murdock; Hongzheng Dai; Elena Perenthaler; Anita Nikoncuk; Marjon van Slegtenhorst; Alice S Brooks; Boris Keren; Caroline Nava; Cyril Mignot; Jessica Douglas; Lance Rodan; Catherine Nowak; Sian Ellard; Karen Stals; Sally Ann Lynch; Marie Faoucher; Gaetan Lesca; Patrick Edery; Kendra L Engleman; Dihong Zhou; Isabelle Thiffault; John Herriges; Jennifer Gass; Raymond J Louie; Elliot Stolerman; Camerun Washington; Francesco Vetrini; Aiko Otsubo; Victoria M Pratt; Erin Conboy; Kayla Treat; Nora Shannon; Jose Camacho; Emma Wakeling; Bo Yuan; Chun-An Chen; Jill A Rosenfeld; Monte Westerfield; Michael Wangler; Shinya Yamamoto; Cigall Kadoch; Daryl A Scott; Hugo J Bellen
Journal:  Am J Hum Genet       Date:  2020-11-23       Impact factor: 11.025

6.  Remodeling the cancer epigenome: mutations in the SWI/SNF complex offer new therapeutic opportunities.

Authors:  Krystal A Orlando; Vinh Nguyen; Jesse R Raab; Tara Walhart; Bernard E Weissman
Journal:  Expert Rev Anticancer Ther       Date:  2019-05-13       Impact factor: 4.512

7.  Genetic and epigenetic modification of human primary NK cells for enhanced antitumor activity.

Authors:  Meisam Naeimi Kararoudi; Brian P Tullius; Nitin Chakravarti; Emily J Pomeroy; Branden S Moriarity; Kathie Beland; Aurelien B L Colamartino; Elie Haddad; Yaya Chu; Mitchell S Cairo; Dean A Lee
Journal:  Semin Hematol       Date:  2020-11-19       Impact factor: 3.851

Review 8.  The tubal epigenome - An emerging target for ovarian cancer.

Authors:  Hunter D Reavis; Ronny Drapkin
Journal:  Pharmacol Ther       Date:  2020-03-18       Impact factor: 12.310

9.  Leverage Large-Scale Biological Networks to Decipher the Genetic Basis of Human Diseases Using Machine Learning.

Authors:  Hao Wang; Jiaxin Yang; Jianrong Wang
Journal:  Methods Mol Biol       Date:  2021

Review 10.  PTEN in Chromatin Remodeling.

Authors:  Jingyi Yang; Yuxin Yin
Journal:  Cold Spring Harb Perspect Med       Date:  2020-02-03       Impact factor: 6.915

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