| Literature DB >> 30595399 |
Wesley K Thompson1, Deanna M Barch2, James M Bjork3, Raul Gonzalez4, Bonnie J Nagel5, Sara Jo Nixon6, Monica Luciana7.
Abstract
The Adolescent Brain Cognitive Development (ABCD) study is poised to be the largest single-cohort long-term longitudinal study of neurodevelopment and child health in the United States. Baseline data on N= 4521 children aged 9-10 were released for public access on November 2, 2018. In this paper we performed principal component analyses of the neurocognitive assessments administered to the baseline sample. The neurocognitive battery included seven measures from the NIH Toolbox as well as five other tasks. We implemented a Bayesian Probabilistic Principal Components Analysis (BPPCA) model that incorporated nesting of subjects within families and within data collection sites. We extracted varimax-rotated component scores from a three-component model and associated these scores with parent-rated Child Behavior Checklist (CBCL) internalizing, externalizing, and stress reactivity. We found evidence for three broad components that encompass general cognitive ability, executive function, and learning/memory. These were significantly associated with CBCL scores in a differential manner but with small effect sizes. These findings set the stage for longitudinal analysis of neurocognitive and psychopathological data from the ABCD cohort as they age into the period of maximal adolescent risk-taking.Entities:
Keywords: Adolescence; Child behavior checklist; Externalizing; Internalizing; NIH toolbox; Neurocognition; Principal components analysis; Stress reactivity
Mesh:
Year: 2018 PMID: 30595399 PMCID: PMC6676481 DOI: 10.1016/j.dcn.2018.12.004
Source DB: PubMed Journal: Dev Cogn Neurosci ISSN: 1878-9293 Impact factor: 6.464
Demographics for Complete-Data and Incomplete-Data Subjects.
| Complete | Incomplete | p-value | |
|---|---|---|---|
| n | 4093 (90.6%) | 428 (9.4%) | |
| Age | 10.00 (0.61) | 9.98 (0.61) | 0.409 |
| Female = yes (%) | 1935 (47.3) | 211 (49.3) | 0.455 |
| Race/Ethnicity (%) | 0.256 | ||
| Hispanic | 802 (19.6) | 85 (20.0) | |
| White | 2417 (59.2) | 234 (54.9) | |
| Black | 394 (9.6) | 50 (11.7) | |
| Asian | 95 (2.3) | 8 (1.9) | |
| Other | 378 (9.3) | 49 (11.5) | |
| Highest Parental Education (%) | 0.025 | ||
| < HS Diploma | 156 (3.8) | 22 (5.2) | |
| HS Diploma/GED | 281 (6.9) | 44 (10.3) | |
| Some College | 1010 (24.7) | 113 (26.5) | |
| Bachelor | 1117 (27.3) | 105 (24.6) | |
| Post Graduate Degree | 1525 (37.3) | 143 (33.5) | |
| Household Married (%) | 2918 (71.6) | 286 (67.0) | 0.053 |
| Household Income (%) | 0.037 | ||
| [<50 K] | 923 (24.5) | 118 (29.6) | |
| [>=50 K & <100 K] | 1139 (30.2) | 124 (31.1) | |
| [>=100 K] | 1704 (45.2) | 157 (39.3) | |
| Relationship (%) | 0.221 | ||
| single | 2993 (73.1) | 326 (76.2) | |
| sibling | 287 (7.0) | 33 (7.7) | |
| twin | 801 (19.6) | 69 (16.1) | |
| triplet | 12 (0.3) | 0 (0.0) | |
| Site (%) | <0.001 | ||
| site01 | 113 (2.8) | 17 (4.0) | |
| site02 | 209 (5.1) | 24 (5.6) | |
| site03 | 252 (6.2) | 27 (6.3) | |
| site04 | 275 (6.7) | 56 (13.1) | |
| site05 | 98 (2.4) | 10 (2.3) | |
| site06 | 200 (4.9) | 11 (2.6) | |
| site07 | 28 (0.7) | 7 (1.6) | |
| site08 | 125 (3.1) | 6 (1.4) | |
| site09 | 131 (3.2) | 19 (4.4) | |
| site10 | 267 (6.5) | 20 (4.7) | |
| site11 | 114 (2.8) | 3 (0.7) | |
| site12 | 110 (2.7) | 2 (0.5) | |
| site13 | 280 (6.8) | 26 (6.1) | |
| site14 | 290 (7.1) | 8 (1.9) | |
| site15 | 142 (3.5) | 28 (6.5) | |
| site16 | 383 (9.4) | 47 (11.0) | |
| site17 | 246 (6.0) | 20 (4.7) | |
| site18 | 123 (3.0) | 3 (0.7) | |
| site19 | 242 (5.9) | 25 (5.8) | |
| site20 | 235 (5.7) | 26 (6.1) | |
| site21 | 230 (5.6) | 43 (10.0) |
Group differences are tested using two-sample t-test with equal variance assumption for continuous variables and tests for discrete variables.
Neurocognitive Assessments.
| Complete | Incomplete | p-value | |
|---|---|---|---|
| n | 4093 | 428 | |
| Pic Vocab | 85.68 (7.96) | 84.65 (8.00) | 0.015 |
| Flanker | 94.95 (8.74) | 93.79 (9.44) | 0.014 |
| List | 98.17 (11.19) | 97.67 (12.08) | 0.410 |
| Card Sort | 93.59 (9.04) | 93.32 (9.33) | 0.577 |
| Pattern | 89.09 (14.33) | 89.09 (14.98) | 1.000 |
| Picture | 103.59 (12.00) | 104.59 (12.09) | 0.120 |
| Reading | 91.57 (6.57) | 90.48 (6.83) | 0.002 |
| RAVLT | 45.23 (9.68) | 43.29 (10.27) | 0.001 |
| WISC-V | 10.13 (2.92) | 9.79 (2.89) | 0.055 |
| LMT | 0.60 (0.17) | 0.59 (0.17) | 0.393 |
| Externalizing | 4.21 (5.50) | 4.72 (5.88) | 0.071 |
| Internalizing | 5.05 (5.47) | 4.87 (5.07) | 0.515 |
| Stress | 2.81 (3.27) | 2.84 (3.13) | 0.868 |
Group differences are tested using two-sample t-test with equal variance assumption.
Varimax Rotated Loadings for Three-Factor Model.
| PC1 | PC2 | PC3 | |||||||
|---|---|---|---|---|---|---|---|---|---|
| .025 | 0.50 | .975 | .025 | 0.50 | .975 | .025 | 0.50 | .975 | |
| Pic Vocab | 0.706 | 0.799 | 0.029 | 0.065 | 0.102 | 0.133 | 0.19 | 0.252 | |
| Flanker | 0.161 | 0.213 | 0.26 | 0.668 | 0.754 | 0.013 | 0.067 | 0.119 | |
| List | 0.4 | 0.538 | 0.105 | 0.148 | 0.195 | 0.416 | 0.563 | ||
| Card Sort | 0.163 | 0.205 | 0.252 | 0.668 | 0.751 | 0.184 | 0.232 | 0.287 | |
| Pattern | −0.029 | 0.015 | 0.055 | 0.771 | 0.85 | 0.039 | 0.085 | 0.135 | |
| Picture | −0.023 | 0.012 | 0.049 | 0.102 | 0.135 | 0.171 | 0.816 | 0.904 | |
| Reading | 0.782 | 0.86 | 0.084 | 0.12 | 0.16 | 0.067 | 0.122 | 0.173 | |
| RAVLT | 0.253 | 0.306 | 0.364 | 0.085 | 0.125 | 0.163 | 0.663 | 0.76 | |
| LMT | 0.424 | 0.57 | 0.246 | 0.299 | 0.36 | 0.002 | 0.068 | 0.144 | |
Pic Vocab = Toolbox Picture Vocabulary; Flanker = Toolbox Flanker Test; List Sort = Toolbox List Sort Working Memory Task; Card Sort = Dimensional Change Card Sort Task; Pattern = Toolbox Pattern Comparison Processing Speed Task; Picture = Toolbox Picture Sequence Memory Task; Reading = Toolbox Oral Reading Test; RAVLT = Rey Auditory Verbal Learning Task, total correct; LMT = Little Man Task percent correct. For Toolbox measures, uncorrected scores were entered into the analysis. Loadings above 0.40 are highlighted; this is an arbitrary cutoff intended solely to assist with simple description of the factors, and does not enter into follow-up analyses in any fashion. Quantiles are from the posterior draws of the MCMC algorithm for each factor loading after varimax rotation and give the middle 95% of the distribution of the loadings (i.e., 95% posterior credible intervals).
Fig. 1Spearman Correlation of Scores from BPPCA and CBCL Outcomes.
PC1 = General Ability Factor; PC2 = Executive Function Factor; PC3 = Learning/Memory Factor; NIHTB_PC1 = Toolbox-derived General Ability factor; NIHTB_PC2 = Toolbox-derived Executive Function factor; NIHTB_PC3 = Toolbox-derived Learning/Memory factor; Total = CBCL Total Problem score; Externalizing = CBCL externalizing score; Internalizing = CBCL Internalizing; Stress = CBCL Stress Reactivity score. Heat maps represent the magnitude of Spearman’s rho correlation coefficients. P-values are not presented.
Regression of CBCL Measures on Varimax-Rotated Factors.
| Externalizing | Internalizing | Stress Reactivity | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Variable | coef | se | p-value | coef | se | p-value | coef | se | p-value |
| pc1 | −0.193 | 0.04 | 4.89e-07 | 0.021 | 0.03 | 0.522 | −0.222 | 0.03 | 1.85e-10 |
| pc2 | −0.015 | 0.03 | 0.633 | −0.046 | 0.03 | 0.111 | −0.158 | 0.03 | 1.41e-07 |
| pc3 | −0.133 | 0.04 | 0.0006 | −0.001 | 0.03 | 0.962 | −0.088 | 0.04 | 0.012 |
| Age | 0.017 | 0.04 | 0.652 | 0.079 | 0.03 | 0.019 | 0.163 | 0.04 | 3.15e-06 |
| Female | −0.389 | 0.05 | 2.22e-15 | 0.088 | 0.04 | 0.041 | −0.296 | 0.04 | 3.73e-11 |
| White | 0.301 | 0.08 | 0.0003 | 0.077 | 0.07 | 0.287 | 0.236 | 0.08 | 0.001 |
| Black | −0.025 | 0.11 | 0.825 | −0.499 | 0.1 | 4.94e-07 | −0.402 | 0.1 | 9.18e-05 |
| Asian | 0.135 | 0.19 | 0.484 | −0.164 | 0.17 | 0.332 | 0.075 | 0.18 | 0.666 |
| Other | 0.227 | 0.11 | 0.046 | 0.043 | 0.1 | 0.667 | 0.145 | 0.1 | 0.159 |
| HS Diploma/GED | 0.066 | 0.17 | 0.694 | −0.057 | 0.15 | 0.702 | 0.048 | 0.15 | 0.752 |
| Some College | 0.125 | 0.15 | 0.412 | 0.020 | 0.13 | 0.876 | 0.138 | 0.14 | 0.319 |
| Bachelor | 0.104 | 0.16 | 0.522 | 0.002 | 0.14 | 0.987 | 0.155 | 0.15 | 0.293 |
| Post-Graduate | 0.085 | 0.17 | 0.611 | 0.018 | 0.15 | 0.899 | 0.128 | 0.15 | 0.398 |
| Married | −0.281 | 0.07 | 7.65e-05 | −0.183 | 0.06 | 0.003 | −0.197 | 0.06 | 0.002 |
| > = 50 K & <100 K | −0.002 | 0.09 | 0.976 | −0.023 | 0.07 | 0.748 | −0.023 | 0.08 | 0.760 |
| > = 100 K | −0.183 | 0.1 | 0.067 | −0.224 | 0.09 | 0.009 | −0.223 | 0.09 | 0.012 |
NIH Toolbox Varimax Rotated Loadings for Three-Factor Model.
| PC1 | PC2 | PC3 | |||||||
|---|---|---|---|---|---|---|---|---|---|
| .025 | 0.50 | .975 | .025 | 0.50 | .975 | .025 | 0.50 | .975 | |
| Pic Vocab | 0.77 | 0.805 | 0.84 | 0.084 | 0.116 | 0.147 | 0.027 | 0.074 | 0.121 |
| Flanker | 0.178 | 0.219 | 0.264 | 0.685 | 0.727 | 0.768 | −0.027 | 0.033 | 0.092 |
| List | 0.485 | 0.548 | 0.605 | 0.121 | 0.159 | 0.198 | 0.398 | 0.48 | 0.565 |
| Card Sort | 0.167 | 0.206 | 0.243 | 0.697 | 0.737 | 0.776 | 0.137 | 0.193 | 0.249 |
| Pattern | −0.035 | −0.003 | 0.032 | 0.782 | 0.817 | 0.852 | 0.026 | 0.076 | 0.128 |
| Picture | 0.043 | 0.082 | 0.125 | 0.107 | 0.13 | 0.153 | 0.912 | 0.943 | 0.972 |
| Reading | 0.79 | 0.825 | 0.858 | 0.129 | 0.162 | 0.193 | 0.02 | 0.062 | 0.112 |
Pic Vocab = Toolbox Picture Vocabulary; Flanker = Toolbox Flanker Test; List Sort = Toolbox List Sort Working Memory Task; Card Sort = Dimensional Change Card Sort Task; Pattern = Toolbox Pattern Comparison Processing Speed Task; Picture = Toolbox Picture Sequence Memory Task; Reading = Toolbox Oral Reading Test. Loadings above 0.40 are highlighted; this is intended solely to assist with simple description of the factors, and does not enter into follow-up analyses in any fashion. Quantiles are from the posterior draws of the MCMC algorithm for each factor loading after varimax rotation and give the middle 95% of the distribution of the loadings (i.e., 95% posterior credible intervals).
Regression of CBCL Measures on NIH Toolbox Varimax-Rotated Factors.
| Externalizing | Internalizing | Stress Reactivity | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Variable | coef | se | p-value | coef | se | p-value | coef | se | p-value |
| pc1 | −0.155 | 0.04 | 2.23e-05 | 0.046 | 0.03 | 0.153 | −0.195 | 0.03 | 6.67e-09 |
| pc2 | −0.036 | 0.03 | 0.258 | −0.053 | 0.03 | 0.060 | −0.174 | 0.03 | 3.86e-09 |
| pc3 | −0.112 | 0.04 | 0.005 | 0.002 | 0.04 | 0.943 | −0.055 | 0.04 | 0.131 |
| Age | 0.002 | 0.04 | 0.938 | 0.069 | 0.03 | 0.040 | 0.148 | 0.04 | 2.23e-05 |
| Female | −0.391 | 0.05 | 1.55e-15 | 0.087 | 0.04 | 0.043 | −0.297 | 0.04 | 2.81e-11 |
| White | 0.295 | 0.08 | 0.0004 | 0.081 | 0.07 | 0.267 | 0.218 | 0.08 | 0.004 |
| Black | −0.007 | 0.11 | 0.946 | −0.492 | 0.1 | 7.20e-07 | −0.388 | 0.1 | 0.0001 |
| Asian | 0.128 | 0.19 | 0.506 | −0.171 | 0.17 | 0.311 | 0.039 | 0.18 | 0.822 |
| Other | 0.229 | 0.11 | 0.045 | 0.056 | 0.1 | 0.573 | 0.141 | 0.1 | 0.174 |
| HS Diploma | 0.044 | 0.17 | 0.794 | −0.059 | 0.15 | 0.690 | 0.020 | 0.15 | 0.893 |
| Some College | 0.097 | 0.15 | 0.526 | 0.010 | 0.13 | 0.937 | 0.107 | 0.14 | 0.441 |
| Bachelor | 0.062 | 0.16 | 0.702 | −0.022 | 0.14 | 0.874 | 0.102 | 0.15 | 0.491 |
| Post-Graduate | 0.033 | 0.17 | 0.840 | −0.019 | 0.15 | 0.892 | 0.055 | 0.15 | 0.713 |
| Married | −0.302 | 0.07 | 1.94e-05 | −0.195 | 0.06 | 0.001 | −0.222 | 0.06 | 0.0005 |
| >=50 K & <100 K | 0.019 | 0.09 | 0.822 | −0.031 | 0.07 | 0.667 | 0.002 | 0.08 | 0.979 |
| >=100 K | −0.177 | 0.1 | 0.072 | −0.193 | 0.09 | 0.025 | −0.151 | 0.09 | 0.0862 |