Literature DB >> 30538208

Different iron storage strategies among bloom-forming diatoms.

Robert H Lampe1, Elizabeth L Mann2, Natalie R Cohen1,3, Claire P Till4, Kimberlee Thamatrakoln5, Mark A Brzezinski6,7, Kenneth W Bruland8, Benjamin S Twining2, Adrian Marchetti9.   

Abstract

Diatoms are prominent eukaryotic phytoplankton despite being limited by the micronutrient iron in vast expanses of the ocean. As iron inputs are often sporadic, diatoms have evolved mechanisms such as the ability to store iron that enable them to bloom when iron is resupplied and then persist when low iron levels are reinstated. Two iron storage mechanisms have been previously described: the protein ferritin and vacuolar storage. To investigate the ecological role of these mechanisms among diatoms, iron addition and removal incubations were conducted using natural phytoplankton communities from varying iron environments. We show that among the predominant diatoms, Pseudo-nitzschia were favored by iron removal and displayed unique ferritin expression consistent with a long-term storage function. Meanwhile, Chaetoceros and Thalassiosira gene expression aligned with vacuolar storage mechanisms. Pseudo-nitzschia also showed exceptionally high iron storage under steady-state high and low iron conditions, as well as following iron resupply to iron-limited cells. We propose that bloom-forming diatoms use different iron storage mechanisms and that ferritin utilization may provide an advantage in areas of prolonged iron limitation with pulsed iron inputs. As iron distributions and availability change, this speculated ferritin-linked advantage may result in shifts in diatom community composition that can alter marine ecosystems and biogeochemical cycles.

Entities:  

Keywords:  Pseudo-nitzschia; ferritin; iron limitation; metatranscriptomics; phytoplankton

Mesh:

Substances:

Year:  2018        PMID: 30538208      PMCID: PMC6310850          DOI: 10.1073/pnas.1805243115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

1.  Quantifying trace elements in individual aquatic protist cells with a synchrotron X-ray fluorescence microprobe.

Authors:  Benjamin S Twining; Stephen B Baines; Nicholas S Fisher; Jörg Maser; Stefan Vogt; Chris Jacobsen; Antonio Tovar-Sanchez; Sergio A Sañudo-Wilhelmy
Journal:  Anal Chem       Date:  2003-08-01       Impact factor: 6.986

2.  Critical roles of bacterioferritins in iron storage and proliferation of cyanobacteria.

Authors:  Nir Keren; Rajeev Aurora; Himadri B Pakrasi
Journal:  Plant Physiol       Date:  2004-07-09       Impact factor: 8.340

3.  Comment on "The Southern Ocean biological response to aeolian iron deposition".

Authors:  Philip W Boyd; Douglas Mackie
Journal:  Science       Date:  2008-01-11       Impact factor: 47.728

4.  Ferritin is used for iron storage in bloom-forming marine pennate diatoms.

Authors:  Adrian Marchetti; Micaela S Parker; Lauren P Moccia; Ellen O Lin; Angele L Arrieta; Francois Ribalet; Michael E P Murphy; Maria T Maldonado; E Virginia Armbrust
Journal:  Nature       Date:  2008-11-26       Impact factor: 49.962

5.  Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus.

Authors:  Thomas Mock; Robert P Otillar; Jan Strauss; Mark McMullan; Pirita Paajanen; Jeremy Schmutz; Asaf Salamov; Remo Sanges; Andrew Toseland; Ben J Ward; Andrew E Allen; Christopher L Dupont; Stephan Frickenhaus; Florian Maumus; Alaguraj Veluchamy; Taoyang Wu; Kerrie W Barry; Angela Falciatore; Maria I Ferrante; Antonio E Fortunato; Gernot Glöckner; Ansgar Gruber; Rachel Hipkin; Michael G Janech; Peter G Kroth; Florian Leese; Erika A Lindquist; Barbara R Lyon; Joel Martin; Christoph Mayer; Micaela Parker; Hadi Quesneville; James A Raymond; Christiane Uhlig; Ruben E Valas; Klaus U Valentin; Alexandra Z Worden; E Virginia Armbrust; Matthew D Clark; Chris Bowler; Beverley R Green; Vincent Moulton; Cock van Oosterhout; Igor V Grigoriev
Journal:  Nature       Date:  2017-01-16       Impact factor: 49.962

6.  Carbonate-sensitive phytotransferrin controls high-affinity iron uptake in diatoms.

Authors:  Jeffrey B McQuaid; Adam B Kustka; Miroslav Oborník; Aleš Horák; John P McCrow; Bogumil J Karas; Hong Zheng; Theodor Kindeberg; Andreas J Andersson; Katherine A Barbeau; Andrew E Allen
Journal:  Nature       Date:  2018-03-14       Impact factor: 49.962

7.  KEGG: new perspectives on genomes, pathways, diseases and drugs.

Authors:  Minoru Kanehisa; Miho Furumichi; Mao Tanabe; Yoko Sato; Kanae Morishima
Journal:  Nucleic Acids Res       Date:  2016-11-28       Impact factor: 16.971

Review 8.  Aerosol trace metal leaching and impacts on marine microorganisms.

Authors:  Natalie M Mahowald; Douglas S Hamilton; Katherine R M Mackey; J Keith Moore; Alex R Baker; Rachel A Scanza; Yan Zhang
Journal:  Nat Commun       Date:  2018-07-05       Impact factor: 14.919

9.  Diversity and Evolutionary History of Iron Metabolism Genes in Diatoms.

Authors:  Ryan D Groussman; Micaela S Parker; E Virginia Armbrust
Journal:  PLoS One       Date:  2015-06-08       Impact factor: 3.240

10.  Integrative analysis of large scale transcriptome data draws a comprehensive landscape of Phaeodactylum tricornutum genome and evolutionary origin of diatoms.

Authors:  Achal Rastogi; Uma Maheswari; Richard G Dorrell; Fabio Rocha Jimenez Vieira; Florian Maumus; Adam Kustka; James McCarthy; Andy E Allen; Paul Kersey; Chris Bowler; Leila Tirichine
Journal:  Sci Rep       Date:  2018-03-19       Impact factor: 4.379

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  13 in total

1.  Proximity proteomics in a marine diatom reveals a putative cell surface-to-chloroplast iron trafficking pathway.

Authors:  Jernej Turnšek; John K Brunson; Maria Del Pilar Martinez Viedma; Thomas J Deerinck; Aleš Horák; Miroslav Oborník; Vincent A Bielinski; Andrew Ellis Allen
Journal:  Elife       Date:  2021-02-16       Impact factor: 8.140

2.  Phylogenomic fingerprinting of tempo and functions of horizontal gene transfer within ochrophytes.

Authors:  Richard G Dorrell; Adrien Villain; Benoît Perez-Lamarque; Guillemette Audren de Kerdrel; Giselle McCallum; Andrew K Watson; Ouardia Ait-Mohamed; Adriana Alberti; Erwann Corre; Kyle R Frischkorn; Juan J Pierella Karlusich; Eric Pelletier; Hélène Morlon; Chris Bowler; Guillaume Blanc
Journal:  Proc Natl Acad Sci U S A       Date:  2021-01-26       Impact factor: 12.779

Review 3.  Metabolic Innovations Underpinning the Origin and Diversification of the Diatom Chloroplast.

Authors:  Tomomi Nonoyama; Elena Kazamia; Hermanus Nawaly; Xia Gao; Yoshinori Tsuji; Yusuke Matsuda; Chris Bowler; Tsuyoshi Tanaka; Richard G Dorrell
Journal:  Biomolecules       Date:  2019-07-30

4.  Diel transcriptional response of a California Current plankton microbiome to light, low iron, and enduring viral infection.

Authors:  B C Kolody; J P McCrow; L Zeigler Allen; F O Aylward; K M Fontanez; A Moustafa; M Moniruzzaman; F P Chavez; C A Scholin; E E Allen; A Z Worden; E F Delong; A E Allen
Journal:  ISME J       Date:  2019-07-18       Impact factor: 10.302

5.  Heme b distributions through the Atlantic Ocean: evidence for "anemic" phytoplankton populations.

Authors:  Evangelia Louropoulou; Martha Gledhill; Eric P Achterberg; Thomas J Browning; David J Honey; Ruth A Schmitz; Alessandro Tagliabue
Journal:  Sci Rep       Date:  2020-03-12       Impact factor: 4.379

6.  PhaeoNet: A Holistic RNAseq-Based Portrait of Transcriptional Coordination in the Model Diatom Phaeodactylum tricornutum.

Authors:  Ouardia Ait-Mohamed; Anna M G Novák Vanclová; Nathalie Joli; Yue Liang; Xue Zhao; Auguste Genovesio; Leila Tirichine; Chris Bowler; Richard G Dorrell
Journal:  Front Plant Sci       Date:  2020-10-16       Impact factor: 5.753

7.  Integrative omics identification, evolutionary and structural analysis of low affinity nitrate transporters in diatoms, diNPFs.

Authors:  Anna Santin; Luigi Caputi; Antonella Longo; Maurizio Chiurazzi; Maurizio Ribera d'Alcalà; Monia Teresa Russo; Maria Immacolata Ferrante; Alessandra Rogato
Journal:  Open Biol       Date:  2021-04-07       Impact factor: 6.411

8.  Small phytoplankton contribute greatly to CO2-fixation after the diatom bloom in the Southern Ocean.

Authors:  Solène Irion; Urania Christaki; Hugo Berthelot; Stéphane L'Helguen; Ludwig Jardillier
Journal:  ISME J       Date:  2021-03-12       Impact factor: 11.217

9.  Fe limitation decreases transcriptional regulation over the diel cycle in the model diatom Thalassiosira pseudonana.

Authors:  Johanna A L Goldman; Megan J Schatz; Chris T Berthiaume; Sacha N Coesel; Mónica V Orellana; E Virginia Armbrust
Journal:  PLoS One       Date:  2019-09-11       Impact factor: 3.240

10.  Iron metabolism strategies in diatoms.

Authors:  Xia Gao; Chris Bowler; Elena Kazamia
Journal:  J Exp Bot       Date:  2021-03-17       Impact factor: 6.992

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