Literature DB >> 30514708

Coupling of Human Rhodopsin to a Yeast Signaling Pathway Enables Characterization of Mutations Associated with Retinal Disease.

Benjamin M Scott1, Steven K Chen1, Nihar Bhattacharyya1, Abdiwahab Y Moalim1, Sergey V Plotnikov1, Elise Heon2, Sergio G Peisajovich1, Belinda S W Chang3,4,5.   

Abstract

G protein-coupled receptors (GPCRs) are crucial sensors of extracellular signals in eukaryotes, with multiple GPCR mutations linked to human diseases. With the growing number of sequenced human genomes, determining the pathogenicity of a mutation is challenging, but can be aided by a direct measurement of GPCR-mediated signaling. This is particularly difficult for the visual pigment rhodopsin-a GPCR activated by light-for which hundreds of mutations have been linked to inherited degenerative retinal diseases such as retinitis pigmentosa. In this study, we successfully engineered, for the first time, activation by human rhodopsin of the yeast mating pathway, resulting in signaling via a fluorescent reporter. We combine this novel assay for rhodopsin light-dependent activation with studies of subcellular localization, and the upregulation of the unfolded protein response in response to misfolded rhodopsin protein. We use these assays to characterize a panel of rhodopsin mutations with known molecular phenotypes, finding that rhodopsin maintains a similar molecular phenotype in yeast, with some interesting differences. Furthermore, we compare our assays in yeast with clinical phenotypes from patients with novel disease-linked mutations. We demonstrate that our engineered yeast strain can be useful in rhodopsin mutant classification, and in helping to determine the molecular mechanisms underlying their pathogenicity. This approach may also be applied to better understand the clinical relevance of other human GPCR mutations, furthering the use of yeast as a tool for investigating molecular mechanisms relevant to human disease.
Copyright © 2019 by the Genetics Society of America.

Entities:  

Keywords:  G protein-coupled receptor; Visual degenerative disease; disease model; retinitis pigmentosa; rhodopsin

Mesh:

Substances:

Year:  2018        PMID: 30514708      PMCID: PMC6366926          DOI: 10.1534/genetics.118.301733

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  98 in total

1.  A rhodopsin gene mutation responsible for autosomal dominant retinitis pigmentosa results in a protein that is defective in localization to the photoreceptor outer segment.

Authors:  C H Sung; C Makino; D Baylor; J Nathans
Journal:  J Neurosci       Date:  1994-10       Impact factor: 6.167

2.  Protein interaction perturbation profiling at amino-acid resolution.

Authors:  Jonathan Woodsmith; Luise Apelt; Victoria Casado-Medrano; Ziya Özkan; Bernd Timmermann; Ulrich Stelzl
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3.  Yeast cells provide insight into alpha-synuclein biology and pathobiology.

Authors:  Tiago Fleming Outeiro; Susan Lindquist
Journal:  Science       Date:  2003-12-05       Impact factor: 47.728

4.  Rhodopsin mutations responsible for autosomal dominant retinitis pigmentosa. Clustering of functional classes along the polypeptide chain.

Authors:  C H Sung; C M Davenport; J Nathans
Journal:  J Biol Chem       Date:  1993-12-15       Impact factor: 5.157

5.  A framework for exhaustively mapping functional missense variants.

Authors:  Jochen Weile; Song Sun; Atina G Cote; Jennifer Knapp; Marta Verby; Joseph C Mellor; Yingzhou Wu; Carles Pons; Cassandra Wong; Natascha van Lieshout; Fan Yang; Murat Tasan; Guihong Tan; Shan Yang; Douglas M Fowler; Robert Nussbaum; Jesse D Bloom; Marc Vidal; David E Hill; Patrick Aloy; Frederick P Roth
Journal:  Mol Syst Biol       Date:  2017-12-21       Impact factor: 11.429

6.  Rescue of mutant rhodopsin traffic by metformin-induced AMPK activation accelerates photoreceptor degeneration.

Authors:  Dimitra Athanasiou; Monica Aguila; Chikwado A Opefi; Kieron South; James Bellingham; Dalila Bevilacqua; Peter M Munro; Naheed Kanuga; Francesca E Mackenzie; Adam M Dubis; Anastasios Georgiadis; Anna B Graca; Rachael A Pearson; Robin R Ali; Sanae Sakami; Krzysztof Palczewski; Michael Y Sherman; Philip J Reeves; Michael E Cheetham
Journal:  Hum Mol Genet       Date:  2017-01-15       Impact factor: 6.150

7.  Next-generation sequencing in health-care delivery: lessons from the functional analysis of rhodopsin.

Authors:  Wayne I L Davies; Susan M Downes; Josephine K Fu; Morag E Shanks; Richard R Copley; Stefano Lise; Simon C Ramsden; Graeme C M Black; Kate Gibson; Russell G Foster; Mark W Hankins; Andrea H Németh
Journal:  Genet Med       Date:  2012-07-12       Impact factor: 8.822

8.  Genetic sensor for strong methylating compounds.

Authors:  Felix Moser; Andrew Horwitz; Jacinto Chen; Wendell Lim; Christopher A Voigt
Journal:  ACS Synth Biol       Date:  2013-10-18       Impact factor: 5.110

9.  Crystallization scale preparation of a stable GPCR signaling complex between constitutively active rhodopsin and G-protein.

Authors:  Shoji Maeda; Dawei Sun; Ankita Singhal; Marcello Foggetta; Georg Schmid; Joerg Standfuss; Michael Hennig; Roger J P Dawson; Dmitry B Veprintsev; Gebhard F X Schertler
Journal:  PLoS One       Date:  2014-06-30       Impact factor: 3.240

10.  GPCRdb in 2018: adding GPCR structure models and ligands.

Authors:  Gáspár Pándy-Szekeres; Christian Munk; Tsonko M Tsonkov; Stefan Mordalski; Kasper Harpsøe; Alexander S Hauser; Andrzej J Bojarski; David E Gloriam
Journal:  Nucleic Acids Res       Date:  2018-01-04       Impact factor: 16.971

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  7 in total

1.  Engineering a Model Cell for Rational Tuning of GPCR Signaling.

Authors:  William M Shaw; Hitoshi Yamauchi; Jack Mead; Glen-Oliver F Gowers; David J Bell; David Öling; Niklas Larsson; Mark Wigglesworth; Graham Ladds; Tom Ellis
Journal:  Cell       Date:  2019-04-04       Impact factor: 41.582

2.  Generation of an RCVRN-eGFP Reporter hiPSC Line by CRISPR/Cas9 to Monitor Photoreceptor Cell Development and Facilitate the Cell Enrichment for Transplantation.

Authors:  Yuanyuan Guan; Yuan Wang; Dandan Zheng; Bingbing Xie; Ping Xu; Guanjie Gao; Xiufeng Zhong
Journal:  Front Cell Dev Biol       Date:  2022-04-28

3.  Serotonin G Protein-Coupled Receptor-Based Biosensing Modalities in Yeast.

Authors:  Bettina Lengger; Emma E Hoch-Schneider; Christina N Jensen; Tadas Jakočiu Nas; Anja A Petersen; Thomas M Frimurer; Emil D Jensen; Michael K Jensen
Journal:  ACS Sens       Date:  2022-04-22       Impact factor: 9.618

Review 4.  Agonist antibody discovery: Experimental, computational, and rational engineering approaches.

Authors:  John S Schardt; Harkamal S Jhajj; Ryen L O'Meara; Timon S Lwo; Matthew D Smith; Peter M Tessier
Journal:  Drug Discov Today       Date:  2021-09-24       Impact factor: 7.851

5.  Self-tunable engineered yeast probiotics for the treatment of inflammatory bowel disease.

Authors:  Benjamin M Scott; Cristina Gutiérrez-Vázquez; Liliana M Sanmarco; Jessica A da Silva Pereira; Zhaorong Li; Agustín Plasencia; Patrick Hewson; Laura M Cox; Madelynn O'Brien; Steven K Chen; Pedro M Moraes-Vieira; Belinda S W Chang; Sergio G Peisajovich; Francisco J Quintana
Journal:  Nat Med       Date:  2021-06-28       Impact factor: 53.440

Review 6.  Engineering G protein-coupled receptor signalling in yeast for biotechnological and medical purposes.

Authors:  Bettina Lengger; Michael K Jensen
Journal:  FEMS Yeast Res       Date:  2020-02-01       Impact factor: 2.796

7.  Optogenetic activation of heterotrimeric G-proteins by LOV2GIVe, a rationally engineered modular protein.

Authors:  Mikel Garcia-Marcos; Kshitij Parag-Sharma; Arthur Marivin; Marcin Maziarz; Alex Luebbers; Lien T Nguyen
Journal:  Elife       Date:  2020-09-16       Impact factor: 8.140

  7 in total

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