Literature DB >> 30489059

Physiologically Important Electrolytes as Regulators of TDP-43 Aggregation and Droplet-Phase Behavior.

Yulong Sun1, Alison Medina Cruz2, Kevin C Hadley1, Natalie J Galant1, Ryan Law2, Robert M Vernon3, Vanessa K Morris1,4, Janice Robertson5, Avijit Chakrabartty1,2,6.   

Abstract

Intraneuronal aggregation of TDP-43 is seen in 97% of all amyotrophic lateral sclerosis cases and occurs by a poorly understood mechanism. We developed a simple in vitro model system for the study of full-length TDP-43 aggregation in solution and in protein droplets. We found that soluble, YFP-tagged full-length TDP-43 (yTDP-43) dimers can be produced by refolding in low-salt HEPES buffer; these solutions are stable for several weeks. We found that physiological electrolytes induced reversible aggregation of yTDP-43 into 10-50 nm tufted particles, without amyloid characteristics. The order of aggregation induction potency was K+ < Na+ < Mg2+ < Ca2+, which is the reverse of the Hofmeister series. The kinetics of aggregation were fit to a single-step model, and the apparent rate of aggregation was affected by yTDP-43 and NaCl concentrations. While yTDP-43 alone did not form stable liquid droplets, it partitioned into preformed Ddx4N1 droplets, showing dynamic diffusion behavior consistent with liquid-liquid phase transition, but then aggregated over time. Aggregation of yTDP-43 in droplets also occurred rapidly in response to changes in electrolyte concentrations, mirroring solution behavior. This was accompanied by changes to droplet localization and solvent exchange. Exposure to extracellular-like electrolyte conditions caused rapid aggregation at the droplet periphery. The aggregation behavior of yTDP-43 is controlled by ion-specific effects that occur at physiological concentrations, suggesting a mechanistic role for local electrolyte concentrations in TDP-43 proteinopathies.

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Year:  2018        PMID: 30489059     DOI: 10.1021/acs.biochem.8b00842

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  9 in total

Review 1.  TDP-43 proteinopathy and mitochondrial abnormalities in neurodegeneration.

Authors:  Ju Gao; Luwen Wang; Tingxiang Yan; George Perry; Xinglong Wang
Journal:  Mol Cell Neurosci       Date:  2019-08-21       Impact factor: 4.314

Review 2.  Liquid-Liquid Phase Separation and Its Mechanistic Role in Pathological Protein Aggregation.

Authors:  W Michael Babinchak; Witold K Surewicz
Journal:  J Mol Biol       Date:  2020-03-10       Impact factor: 5.469

3.  Structure of pathological TDP-43 filaments from ALS with FTLD.

Authors:  Diana Arseni; Masato Hasegawa; Alexey G Murzin; Fuyuki Kametani; Makoto Arai; Mari Yoshida; Benjamin Ryskeldi-Falcon
Journal:  Nature       Date:  2021-12-08       Impact factor: 69.504

4.  The return of the rings: Evolutionary convergence of aromatic residues in the intrinsically disordered regions of RNA-binding proteins for liquid-liquid phase separation.

Authors:  Wen-Lin Ho; Jie-Rong Huang
Journal:  Protein Sci       Date:  2022-05       Impact factor: 6.993

5.  Differences in interaction lead to the formation of different types of insulin amyloid.

Authors:  Wakako Mori; Ryosuke Kawakami; Yosuke Niko; Tomohiro Haruta; Takeshi Imamura; Kentaro Shiraki; Tamotsu Zako
Journal:  Sci Rep       Date:  2022-05-20       Impact factor: 4.996

6.  Driving Forces of Liquid-Liquid Phase Separation in Biological Systems.

Authors:  Boris Y Zaslavsky; Luisa A Ferreira; Vladimir N Uversky
Journal:  Biomolecules       Date:  2019-09-10

Review 7.  Structural Insights Into TDP-43 and Effects of Post-translational Modifications.

Authors:  Liberty François-Moutal; Samantha Perez-Miller; David D Scott; Victor G Miranda; Niloufar Mollasalehi; May Khanna
Journal:  Front Mol Neurosci       Date:  2019-12-17       Impact factor: 5.639

8.  A quantitative biology approach correlates neuronal toxicity with the largest inclusions of TDP-43.

Authors:  Roberta Cascella; Alessandra Bigi; Dylan Giorgino Riffert; Maria Cristina Gagliani; Emilio Ermini; Matteo Moretti; Katia Cortese; Cristina Cecchi; Fabrizio Chiti
Journal:  Sci Adv       Date:  2022-07-27       Impact factor: 14.957

9.  Full-length TDP-43 and its C-terminal domain form filaments in vitro having non-amyloid properties.

Authors:  Claudia Capitini; Giulia Fani; Mirella Vivoli Vega; Amanda Penco; Claudio Canale; Lisa D Cabrita; Martino Calamai; John Christodoulou; Annalisa Relini; Fabrizio Chiti
Journal:  Amyloid       Date:  2020-10-07       Impact factor: 6.571

  9 in total

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