| Literature DB >> 30482213 |
Viviane Martha Santos de Morais1, Elker Lene Santos de Lima2, Georgea Gertrudes de Oliveira Mendes Cahú1, Thaisa Regina Rocha Lopes1, Juliana Prado Gonçales1, Maria Tereza Cartaxo Muniz2, Maria Rosângela Cunha Duarte Coêlho3,4.
Abstract
BACKGROUND: Host genetic factors such as MBL2 gene polymorphisms cause defects in the polymerization of MBL protein and result in a functional deficiency and/or in low serum levels that can influence susceptibility to various viral infections. The aim of this study was to estimate the frequency of alleles, genotypes and haplotypes related to -550, -221 and exon 1 polymorphisms of the MBL2 gene and investigate their association with HHV-8 in people living with HIV/AIDS (PLWHA), as well as the impacts on CD4 cell count and HIV viral load in HIV/HHV-8 coinfected and HIV monoinfected patients.Entities:
Keywords: HIV/HHV-8 coinfection; Human herpesvirus 8; MBL2 gene; Mannose binding lectin
Mesh:
Substances:
Year: 2018 PMID: 30482213 PMCID: PMC6260567 DOI: 10.1186/s12977-018-0456-8
Source DB: PubMed Journal: Retrovirology ISSN: 1742-4690 Impact factor: 4.602
Sequence of primers and probes used to detect polymorphisms of the promoter and structural regions of the MBL2 gene
| Nucleotide sequence | |
|---|---|
| Promoter region (-550) | |
| Primer forward | 5′-CCAACGTAGTAAGAAATTTCCAGAGA-3′ |
| Primer reverse | 5′-CAACCCAGCCCAGAATTAACTG-3′ |
| Sonda VIC | 5′-VIC-CCTGTCTAAAACACC-MGB-3 |
| Sonda FAM | 5′-FAM-AGCCTGTGTAAAAC-MGB-3 |
| Promoter region (-221) | |
| Primer forward | 5′-GCACGGTCCCATTTGTTCTCA-3′ |
| Primer reverse | 5′-GCGTTGCTGCTGGAAGACTATAAA-3′ |
| Sonda VIC | 5′-VIC-CATGCTTTCGGTGGCAG-MGB-3′ |
| Sonda FAM | 5′-FAM-CATGCTTTCCGTGGCAG-MGB-3′ |
| Structural region (exon-1) | |
| Primer forward | 5′-AGGCATCAACGGCTTCCCA-3′ |
| Primer reverse | 5′-CAGAACAGCCCAACACGTACCT-3′ |
Frequency of sociodemographic variables in coinfected and monoinfected patients
| Variables | HIV/HHV-8 n = 124 | HIV n = 213 | OR (95% CI) | |
|---|---|---|---|---|
| Age | 42.8 (± 11.9)b | 42.7 (± 11)b | 0.9c | – |
| Sex | ||||
| Male | 87 (70.2%) | 131 (62.5%) | – | Reference |
| Female | 37 (29.8%) | 82 (38.5%) | 0.1 | 1.5 (0.9–2.4) |
| Ethnicityd | ||||
| Mulattos | 56 (45.2%) | 101 (47.4%) | – | Reference |
| White | 36 (29.0%) | 60 (28.2%) | 0.8 | 0.9 (0.5–1.6) |
| Black | 30 (24.2%) | 48 (22.5%) | 0.8 | 0.9 (0.5–1.5) |
| Amerindians | 1 (0.8%) | 3 (1.4%) | 1.0 | 1.7 (0.2–16.4) |
| Asians | 1 (0.8%) | 1 (0.5%) | 1.0 | 0.5 (0.03–9.0) |
OR Odds ratio, CI confidence interval
ap values Chi-square test or Fisher’s exact test
bValues referring to mean age with the standard deviation indicated in parentheses
cp values ANOVA test
dBased on ethnic self-identification, according to the classification system of the Brazilian Institute of Geography and Statistics
Median values of the clinical variables analysed in coinfected and monoinfected patients
| Median of variables | HIV/HHV-8 n = 124 (range)b | HIV n = 213 (range)b | |
|---|---|---|---|
| First count of TCD4 cell (cell/mm3) | 177.5 (4–1206) | 275 (4–1565) |
|
| Last count of TCD4 cell (cell/mm3) | 525 (20–1674) | 573 (15–2171) | 0.8 |
| First viral load of HIV (copies/ml) | 23.859 (79–4.500.0) | 11.892 (49–1.642.2) | 0.3 |
| Last viral load of HIV (copies/ml) | < 40* (< 40–346.3) | < 40* (< 40–1.873.5) | 0.7 |
| Time of HIV infection (years) | 6.8 (0–24.2) | 5.7 (0–25.2) | 0.3 |
| Time from HIV diagnosis to the start of ART (years) | 0.29 (0–20.2) | 0.28 (0–20.0) | 0.7 |
| Time on ART (years) | 4.7 (0–18.0) | 4.1 (0–18.0) | 0.2 |
*All were on ART. The table has no missing data
ap values Kruskal–Wallis test
bMinimum and maximum values are referenced in bracket
Distribution of frequencies of alleles, genotypes and haplotypes of the MBL2 gene between monoinfected and coinfected patients
| Variables | HIV/HHV-8 n = 124 (%) | HIV n = 213 (%) | OR (95% CI) | |
|---|---|---|---|---|
| Promoter (-550) | ||||
| Alleles | ||||
| L | 173 (70) | 297 (70) | – | Reference |
| H | 75 (30) | 129 (30) | 1.0 | 1.0 (0.7–1.4) |
| Genotypes | ||||
| LL | 62 (50) | 102 (48) | – | Reference |
| HL | 49 (40) | 93 (44) | 0.5 | 1.1 (0.7–1.8) |
| HH | 13 (10) | 18 (8) | 0.7 | 0.8 (0.4–1.8) |
| Promoter (-221) | ||||
| Alleles | ||||
| Y | 210 (85) | 356 (84) | – | Reference |
| X | 38 (15) | 70 (16) | 0.7 | 1.1 (0.7–1.7) |
| Genotypes | ||||
| YY | 89 (72) | 148 (70) | – | Reference |
| YX | 32 (26) | 60 (28) | 0.6 | 1.1 (0.7–1.9) |
| XX | 3 (2) | 5 (2) | 0.6 | 1.0 (0.2–4.3) |
| Exon-1 (52, 54, 57) | ||||
| Alleles | ||||
| A | 196 (79) | 344 (81) | – | Reference |
| O | 52 (21) | 82 (19) | 0.6 | 0.9 (0.6–1.3) |
| Genotypes | ||||
| AA | 81 (65) | 143 (67) | – | Reference |
| AO | 34 (28) | 58 (27) | 0.9 | 1.0 (0.6–1.6) |
| OO | 9 (7) | 12 (6) | 0.5 | 0.7(0.3–1.9) |
| Haplotypes | ||||
| High expression | 46 (37) | 78 (36) | – | Reference |
| Intermediate expression | 69 (56) | 123 (58) | 0.8 | 1.0 (0.7–1.7) |
| Low expression | 9 (7) | 12 (6) | 0.6 | 0.8 (0.3–2.0) |
OR Odds ratio, CI confidence interval
ap values Chi-square test or Fisher’s exact test
Distribution of MBL2 gene haplotype frequencies according to coinfected and monoinfected expression levels
| Haplotypes | Expression | HIV/HHV-8 n = 124 (%) | HIV n = 213 (%) | OR (95% CI) | |
|---|---|---|---|---|---|
| HYA/LYA | High | 17 (13.7) | 43 (20.2) | 1 | Reference |
| LYA/LYA | High | 19 (15.3) | 24 (11.3) | 0.1 | 0.5 (0.2–1.1) |
| HYA/HYA | High | 10 (8.1) | 11 (5.2) | 0.1 | 0.4 (0.1–1.2) |
| HYA/HXA | Intermediate | 0 (0) | 1 (0.5) | 0.5 | – |
| HYA/HYO | Intermediate | 1 (0.8) | 5 (2.3) | 0.7 | 2.0 (0.2–18.2) |
| HYA/LXA | Intermediate | 12 (9.7) | 23 (10.8) | 0.5 | 0.8 (0.3–1.9) |
| HYA/LYO | Intermediate | 19 (15.3) | 24 (11.3) | 0.1 | 0.5 (0.2–1.14) |
| LYA/LXA | Intermediate | 20 (16.1) | 36 (16.9) | 0.4 | 0.7 (0.3–1.6) |
| LYA/LYO | Intermediate | 14 (11.3) | 29 (13.6) | 0.6 | 0.8 (0.3–1.9) |
| LXA/LXA | Intermediate | 3 (2.4) | 5 (2.3) | 0.7 | 0.7 (0.1–3.1) |
| HYO/HYO | Low | 2 (1.6) | 1 (0.5) | 0.2 | 0.2 (0.02–2.3) |
| HYO/LYO | Low | 1 (0.8) | 3 (1.4) | 1.0 | 1.2 (0.1–12.2) |
| LYO/LYO | Low | 6 (4.8) | 8 (3.8) | 0.3 | 0.5 (0.2–1.7) |
OR Odds ratio, CI confidence interval
ap values Chi-square test or Fisher’s exact test
Univariate analysis of HIV viral load and TCD4 counts according to the expression of haplotypes in coinfected and monoinfected patients
| Variables | HIV/HHV-8 n = 124 | HIV n = 213 | OR (95% CI) | |
|---|---|---|---|---|
| High expression haplotype | ||||
| First HIV viral load > 150,000 | 16 (34.8) | 14 (17.9) | – | Reference |
| First HIV viral load ≤ 150,000 | 30 (65.2) | 64 (82.1) |
|
|
| Last HIV viral load detectable | 14 (30.4) | 33 (42.3) | – | Reference |
| Last HIV viral load undetectable | 32 (69.6) | 45 (57.7) | 0.2 | 0.6 (0.3–1.3) |
| First TCD4 cell count ≤ 350 | 34 (73.9) | 41 (52.6) | – | Reference |
| First TCD4 cellcount > 350 | 12 (26.1) | 37 (47.4) |
|
|
| Last TCD4 cell count ≤ 350 | 3 (6.5) | 8 (10.3) | – | Reference |
| Last TCD4 cell count > 350 | 43 (93.5) | 70 (89.7) | 0.5 | 0.6 (0.1–2.4) |
| Intermediate expression haplotype | ||||
| First HIV viral load > 150,000 | 15 (21.7) | 23 (18.7) | – | Reference |
| First HIV viral load ≤ 150,000 | 54 (78.3) | 100 (81.3) | 0.6 | 1.2 (0.6–2.5) |
| Last HIV viral load detectable | 34 (49.3) | 52 (42.3) | – | Reference |
| Last HIV viral load undetectable | 35 (50.7) | 71 (57.7) | 0.3 | 1.3 (0.7–2.4) |
| First TCD4 cell count ≤ 350 | 52 (75.4) | 76 (61.8) | – | Reference |
| First TCD4 cell count > 350 | 17 (24.6) | 47 (38.2) | 0.06 | 1.9 (1.0–3.6) |
| Last TCD4 cell count ≤ 350 | 15 (21.7) | 9 (7.3) | – | Reference |
| Last TCD4 cell count > 350 | 54 (78.3) | 114 (92.7) |
|
|
| Low expression haplotype | ||||
| First HIV viral load > 150,000 | 2 (22.2) | 3 (25) | – | Reference |
| First HIV viral load ≤ 150,000 | 7 (77.8) | 9 (75) | 1.0 | 0.9 (0.1–6.6) |
| Last HIV viral load detectable | 5 (55.6) | 8 (66.7) | – | Reference |
| Last HIV viral load undetectable | 4 (44.4) | 4 (33.3) | 0.7 | 0.6 (0.1–3.7) |
| First TCD4 cell count ≤ 350 | 6 (66.7) | 10 (83.3) | – | Reference |
| First TCD4 cell count > 350 | 3 (33.3) | 2 (16.7) | 0.6 | 0.4 (0.1–3.1) |
| Last TCD4 cell count ≤ 350 | 3 (33.3) | 3 (25) | – | Reference |
| Last TCD4 cell count > 350 | 6 (66.7) | 9 (75) | 1.0 | 1.5 (0.2–10.1) |
OR Odds ratio, CI confidence interval
ap values Chi-square test or Fisher’s exact test
Multivariate analysis of HIV viral load and TCD4 cell count according to the expression of haplotypes in coinfected and monoinfected patients
| Variables | HIV/HHV-8 n = 124 | HIV n = 213 | OR (95% CI) | |
|---|---|---|---|---|
| High expression haplotype | ||||
| First HIV viral load > 150,000 | 16 (34.8) | 14 (17.9) | – | Reference |
| First HIV viral load ≤ 150,000 | 30 (65.2) | 64 (82.1) | 0.1 | 2.1 (0.9–5.1) |
| Last HIV viral load detectable | 6 (13) | 17 (21.8) | – | Reference |
| Last HIV viral load undetectable | 40 (87) | 61 (78.2) | 0.2 | 0.4 (0.1–1.4) |
| First TCD4 cell count ≤ 350 | 34 (73.9) | 41 (52.6) | – | Reference |
| First TCD4 cell count > 350 | 12 (26.1) | 37 (47.4) | 0.1 | 2.0 (0.9–4.7) |
| Intermediate expression haplotype | ||||
| First TCD4 cell count ≤ 350 | 52 (75.4) | 76 (61.8) | – | Reference |
| First TCD4 cell count > 350 | 17 (24.6) | 47 (38.2) | 0.2 | 1.6 (0.8–3.1) |
| Last TCD4 cell count ≤ 350 | 15 (21.7) | 9 (7.3) | – | Reference |
| Last TCD4 cell count > 350 | 54 (78.3) | 114 (92.7) |
| 3.1 (1.2–7.6) |
OR Odds ratio, CI confidence interval
ap values Chi-square test