Literature DB >> 30469571

Concurrent polarization IR analysis to determine the 3D angles and the order parameter for molecular orientation imaging.

Young Jong Lee.   

Abstract

A non-tomographic analysis method is proposed to determine the 3D angles and the order parameter of molecular orientation using polarization-dependent infrared (IR) spectroscopy. Conventional polarization-based imaging approaches provide only 2D-projected orientational information of single vibrational modes. The newly proposed method concurrently analyses polarization angle-dependent absorptance of two non-parallel transition dipole moments. The relative phase angle and the maximum-to-minimum ratios observed from the two polarization profiles are used to calculate the 3D angles of the mean molecular orientation and the order parameter of the orientational distribution. Usage of those relative observables as intermediate input parameters makes the analysis results robust against variations in concentration, thickness, absorption peak, and absorption cross-section, which can occur in typical imaging conditions. This analysis is based on a single-step, non-iterative calculation that does not require any analytical model function of an orientational distribution function. This concurrent polarization analysis method is demonstrated using two simulation data examples, followed by associated error propagation analysis and discussion on the effect of absorption strength. Application of this robust spectral analysis method to polarization IR microscopy will provide a full molecular orientation image without tilting that tomographies require.

Entities:  

Year:  2018        PMID: 30469571      PMCID: PMC6289513          DOI: 10.1364/OE.26.024577

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  18 in total

1.  Molecular orientation and angular distribution probed by angle-resolved absorbance and second harmonic generation

Authors: 
Journal:  Anal Chem       Date:  2000-03-01       Impact factor: 6.986

2.  Polarization-modulated second harmonic generation in collagen.

Authors:  Patrick Stoller; Karen M Reiser; Peter M Celliers; Alexander M Rubenchik
Journal:  Biophys J       Date:  2002-06       Impact factor: 4.033

3.  Dynamic polarized infrared spectroscopy of electric field-induced molecular reorientation in a chiral smectic-A liquid crystal.

Authors: 
Journal:  Phys Rev Lett       Date:  1995-09-18       Impact factor: 9.161

4.  Defocused orientation and position imaging (DOPI) of myosin V.

Authors:  Erdal Toprak; Joerg Enderlein; Sheyum Syed; Sean A McKinney; Rolfe G Petschek; Taekjip Ha; Yale E Goldman; Paul R Selvin
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-13       Impact factor: 11.205

5.  Defocused imaging of second harmonic generation from a single nanocrystal.

Authors:  N Sandeau; L Le Xuan; D Chauvat; C Zhou; J-F Roch; S Brasselet
Journal:  Opt Express       Date:  2007-11-26       Impact factor: 3.894

6.  Temperature-dependent IR-transition moment orientational analysis applied to thin supported films of poly-ε-caprolactone.

Authors:  Wilhelm Kossack; Martha Schulz; Thomas Thurn-Albrecht; Jörg Reinmuth; Viktor Skokow; Friedrich Kremer
Journal:  Soft Matter       Date:  2017-12-13       Impact factor: 3.679

7.  Rapid visualization of macromolecular orientation by discrete frequency mid-infrared spectroscopic imaging.

Authors:  Tomasz P Wrobel; Prabuddha Mukherjee; Rohit Bhargava
Journal:  Analyst       Date:  2016-12-19       Impact factor: 4.616

8.  Infrared Transition Moment Orientational Analysis on the Structural Organization of the Distinct Molecular Subunits in Thin Layers of a High Mobility n-Type Copolymer.

Authors:  Arthur Markus Anton; Robert Steyrleuthner; Wilhelm Kossack; Dieter Neher; Friedrich Kremer
Journal:  J Am Chem Soc       Date:  2015-05-04       Impact factor: 15.419

9.  FTIR study of polycaprolactone chain organization at interfaces.

Authors:  Tamara Elzein; Mohamad Nasser-Eddine; Christelle Delaite; Sophie Bistac; Philippe Dumas
Journal:  J Colloid Interface Sci       Date:  2004-05-15       Impact factor: 8.128

10.  Single Molecule 3D Orientation in Time and Space: A 6D Dynamic Study on Fluorescently Labeled Lipid Membranes.

Authors:  Richard Börner; Nicky Ehrlich; Johannes Hohlbein; Christian G Hübner
Journal:  J Fluoresc       Date:  2016-03-14       Impact factor: 2.217

View more
  2 in total

1.  Super-Resolved 3D Mapping of Molecular Orientation Using Vibrational Techniques.

Authors:  Paulina Koziol; Karolina Kosowska; Danuta Liberda; Ferenc Borondics; Tomasz P Wrobel
Journal:  J Am Chem Soc       Date:  2022-07-26       Impact factor: 16.383

2.  Macromolecular Orientation in Biological Tissues Using a Four-Polarization Method in FT-IR Imaging.

Authors:  Paulina Koziol; Danuta Liberda; Wojciech M Kwiatek; Tomasz P Wrobel
Journal:  Anal Chem       Date:  2020-09-11       Impact factor: 6.986

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.