| Literature DB >> 30466392 |
Doris Schor1,2, Luís Cristóvão Porto3, Eric Henrique Roma4, Marcel de Souza Borges Quintana5, Gustavo Milson Fabricio-Silva3, Maria Gloria Bonecini-Almeida1, Abelardo Queiroz-Campos Araújo2, Maria Jose Andrada-Serpa2.
Abstract
BACKGROUND: HTLV-1-associated myelopathy/tropical spastic paraparesis (HAM/TSP) is a progressive neurological and inflammatory disease, associated with HTLV-1 infection. HAM/TSP neurological disease is a consequence of an inflammatory reaction, and adaptive immune responses, through the secretion of anti-inflammatory and pro-inflammatory cytokines, play an important role in the outcome of infection and disease progression. Studies addressing the association between cytokines functional single nucleotide polymorphisms and HAM/TSP development are scarce.Entities:
Keywords: Cytokine; HAM/TSP; HTLV-1; Proviral load; SNP
Mesh:
Substances:
Year: 2018 PMID: 30466392 PMCID: PMC6251227 DOI: 10.1186/s12879-018-3510-1
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.090
Demographic variables distribution according with clinical condition of HAM/TSP patients
| Variables | HAM/TSP | Asymptomatic | OR (CI:95%) | Corrected | |
|---|---|---|---|---|---|
| Skin color (n/%) | |||||
| White | 40 (46.5) | 46 (53.5) | 1 | ||
| Non-White | 28 (43.1) | 37 (56.9) | 0.87 (0.45–1.66) | 0.67a | 1.00 |
| Sex (n/%) | |||||
| Male | 27 (41.5) | 38 (58.5) | 1 | ||
| Female | 41 (47.7) | 45 (52.3) | 1.28 (0.67–2.47) | 0.45a | 1.00 |
| Age | |||||
| Mean (SD) | 57.8 (11.3) | 53.3 (14.7) | 1.03 (1–1.05) | 0.04b | 0.16 |
| PVL | 7.1(4.0–9.8) | 1.3 (0–4.9) | 1.14 (1.06–1.24) | < 0.01c | < 0.04 |
HAM/TSP HTLV-1-associated myelopathy / Tropical spastic paraparesis, OR odds ratio, CI confidence interval, SD standard deviation, PVL proviral loads
aChi-Square or Fisher Exact test. bT-test for comparison of difference means and cKruskal-Wallys test. dAdjusted p-value using Bonferroni correction for multiple comparisons
Analysis of associations between TNFA-308G/A, IL6-174G/C and IFNG + 874 T/A polymorphisms and risk of HAM/TSP development
| Polymorphisms | HAM/TSP | Asymptomatic | ||
|---|---|---|---|---|
| OR (IC:95%) | ||||
|
| ||||
| GG | 55 (82.1) | 69 (83.1) | 1 | 0.98 |
| GA | 12 (17.9) | 13 (15.7) | 1.16 (0.48–2.75) | |
| AA | 0 | 1 (1.2) | 0 (NA) | |
| GG (low) | 55 (82.1) | 69 (83.1) | 1 | 1 |
| GA + AA (high) | 12 (17.9) | 14 (16.9) | 1.08 (0.45–2.52) | |
| AA | 0 | 1 (1.2) | 1 | 1 |
| GA + GG | 67 (100) | 82 (98.8) | 0 (NA) | |
| | ||||
| G | 122 (91.0) | 151 (91.0) | 1 | 1 |
| A | 12 (9.0) | 15 (9.0) | 0.99 (0.44–2.19) | |
|
| ||||
| GG | 48 (71.6) | 56 (68.3) | 1 | 0.88 |
| GC | 16 (23.9) | 24 (29.3) | 0.78 (0.37–1.62) | |
| CC | 3(4.5) | 2 (2.4) | 1.75 (0.28–13.7) | |
| CC (low) | 3 (4.5) | 2 (2.4) | 1 | 0.66 |
| GC + GG (high) | 64 (95.5) | 80 (97.6) | 0.53 (0.07–3.31) | |
| GG | 48 (71.6) | 56 (68.3) | 1 | 0.79 |
| GC + CC | 19 (28.4) | 26 (31.7) | 0.85 (0.42–172) | |
| | ||||
| G | 112(83.6) | 136 (82.9) | 1 | 1 |
| C | 22 (16.4) | 28 (17.1) | 0.95 (0.51–1.76) | |
|
| ||||
| AA (low) | 34 (50.7) | 34 (43.6) | 1 | 0.86 |
| AT (intermediate) | 26 (38.8) | 40 (51.3) | 0.65 (0.33–1.29) | |
| TT (high) | 7(10.4) | 4 (5.1) | 1.75 (0.48–7.20) | |
| AA | 34 (50.7) | 34 (43.6) | 1 | 0.49 |
| AT+TT | 33 (49.3) | 44 (56.4) | 0.75 (0.39–1.44) | |
| TT | 7 (10.4) | 4 (5.1) | 1 | 0.35 |
| AT+AA | 60 (89.6) | 74 (94.9) | 0.46 (0.12–1.61) | |
| | ||||
| A | 94 (70.1) | 108 (69.2) | 1 | 0.97 |
| T | 40 (29.9) | 48 (30.8) | 0.96 (0.58–1.58) | |
HAM/TSP HTLV-1 associated myelopathy tropical spastic paraparesis, Asymptomatic HTLV-1 patients, OR odds ration with confident interval, Chi-square 2 × 2 or 3 × 2 contingent tables, Fisher exact or Cochran-Armitage tests
Analysis of associations between TGFB codon 10 T/C and codon 25G/C polymorphisms and risk of HAM/TSP development
| Polymorphisms | HAM/TSP | Asymptomatic | ||
|---|---|---|---|---|
| OR (IC:95%) | ||||
| TGFB Codon 10 | ||||
| T/T | 25 (37.3) | 24 (28.9) | 1 | |
| T/C | 29 (43.3) | 45 (54.2) | 0.62 (0.3–1.28) | |
| C/C | 13 (19.4) | 14 (16.9) | 0.89 (0.35–2.29) | 0.61 |
| Alleles | ||||
| T | 79 (59.0) | 93 (55.4) | 1 | |
| C | 55 (41.0) | 73 (43.5) | 0.89 (0.56–1.41) | 0.70 |
| TGFB Codon 25 | ||||
| G/G | 56 (83.6) | 71 (85.5) | 1 | |
| G/C | 10 (14.9) | 11 (13.3) | 1.15 (0.45–2.92) | |
| C/C | 1 (1.5) | 1 (1.2) | 1.27 (0.05–32.54) | 0.74 |
| T/C G/G High | 47 (70.1) | 58 (69.9) | 1 | |
| T/C G/C; C/C G/G; T/T G/C Intermediate | 15 (22.4) | 24 (28.9) | 0.77 (0.36–1.62) | |
| C/C G/C; C/C C/C; T/T C/C Low | 5 (7.5) | 1 (1.2) | 6.17 (0.95–120.4) | 0.51 |
HAM/TSP HTLV-1 associated myelopathy tropical spastic paraparesis, Asymptomatic HTLV-1 patients, OR odds ration with confident interval, Chi-square 2 × 2 or 3 × 2 contingent tables, Fisher exact or Cochran-Armitage tests
Analysis of associations between IL10-1082A/G, -819C/T and -592C/A polymorphisms and risk of HAM/TSP development
| Polymorphisms | HAM/TSP | AC | Crude | ||
|---|---|---|---|---|---|
| OR (IC:95%) | Corrected | ||||
|
| |||||
| A/A (low) | 20 (32.3) | 38 (53.5) | 1 | ||
| G/A (intermediate) | 34 (54.8) | 24 (33.8) | 2.69 (1.28–5.79) | ||
| G/G (high) | 8 (12.9) | 9 (12.7) | 1.69 (0.56–5.1) | 0.07 | 0.21 |
| A/A | 20 (32.3) | 38 (53.5) | 1 | ||
| G/A G/G | 42 (67.7) | 33 (46.5) | 2.42 (1.2–4.97) | 0.01 | 0.07 |
| Alleles | |||||
| A | 74 (59.7) | 100 (70.4) | 1 | ||
| G | 50 (40.3) | 42 (29.6) | 1.61 (0.97–2.70) | 0.07 | 0.21 |
|
| |||||
| C/C and C/C | 25 (43.3) | 29 (40.8) | 1 | ||
| C/T and C/A | 31 (50.0) | 27 (38.0) | 1.33 (0.63–2.8) | ||
| T/T and A/A | 6 (9.7) | 15 (21.2) | 0.46 (0.15–1.33) | 0.38 | 1 |
| C/C and C/C | 25 (40.3) | 29 (40.8) | 1 | ||
| C/T + T/T and C/A + A/A | 37 (59.7) | 42 (59.2) | 1.02 (0.51–2.05) | 1 | 1 |
| T/T and A/A | 6 (9.7) | 15 (21.2) | 1 | ||
| C/C + C/T and C/C + C/A | 56 (90.3) | 56 (78.8) | 2.5 (0.94–7.44) | 0.12 | 0.84 |
| Phenotype | |||||
| ACC/ACC, ACC/ATA, ATA/ATA (Low) | 20 (32.3) | 38 (53.5) | 1 | ||
| GCC/ACC, GCC/ATA (Intermediate) | 34 (54.8) | 24 (33.8) | 2.69 (1.28–5.79) | ||
| GCC/GCC (High) | 8 (12.9) | 9 (12.7) | 1.69 (0.56–5.10) | 0.07 | 0.21 |
HAM/TSP HTLV-1 associated myelopathy tropical spastic paraparesis, Asymptomatic HTLV-1 patients, OR odds ration with confident interval, Chi-square 2 × 2 or 3 × 2 contingent tables, Fisher exact or Cochran-Armitage tests
a-819 and -592 are in linkage disequilibrium
Haplotype distribution of the IL-10 (−1082G/A,-819C/T and-592C/A) according with the clinical condition
| Haplotypes | HAM/TSP | Asymptomatic | ||||
|---|---|---|---|---|---|---|
|
| (%) |
| (%) | OR (IC:95%) | ||
| GCC | 56 | (41.18) | 54 | (32.53) | 1 | |
| ATA | 49 | (29.52) | 69 | (50.74) | 0.64 (0.36–1.12) | |
| ACC | 31 | (22.79) | 43 | (25.9) | 0.62 (0.34–1.13) | 0.19 |
HAM/TSP HTLV-1 associated myelopathy tropical spastic paraparesis, Asymptomatic HTLV-1 patients, OR odds ration with confident interval
aChi-square 3 × 2 contingent tables
Fig. 1HTLV-1 pro viral load according with cytokines genotypes and phenotypes in HAM/TSP versus AC. The proviral load was expressed as percentage of infected blood leukocytes. a, b and c represent TNFA-308G/C, IL6-174GC genotypes and d represent TGFB1 phenotypes. Statistical significances are indicated according with p value
Fig. 2HTLV-1 pro viral load according with IL10 genotypes and phenotypes in HAM/TSP versus AC. The proviral load was expressed as percentage of infected blood leukocytes. a and b represent IL10–1082G/A and IL-10 -592A/C and -819C/T genotypes. c represents IL-10 phenotype. Statistical significances are indicated according with p value