Literature DB >> 30463497

Individual dynamic predictions using landmarking and joint modelling: Validation of estimators and robustness assessment.

Loïc Ferrer1, Hein Putter2, Cécile Proust-Lima1.   

Abstract

After the diagnosis of a disease, one major objective is to predict cumulative probabilities of events such as clinical relapse or death from the individual information collected up to a prediction time, usually including biomarker repeated measurements. Several competing estimators have been proposed, mainly from two approaches: joint modelling and landmarking. These approaches differ by the information used, the model assumptions and the complexity of the computational procedures. This paper aims to review the two approaches, precisely define the derived estimators of dynamic predictions and compare their performances notably in case of misspecification. The ultimate goal is to provide key elements for the use of individual dynamic predictions in clinical practice. Prediction of two competing causes of prostate cancer progression from the history of prostate-specific antigen is used as a motivated example. We formally define the quantity to estimate and its estimators, propose techniques to assess the uncertainty around predictions and validate them. We then conduct an in-depth simulation study compare the estimators in terms of prediction error, discriminatory power, efficiency and robustness to model assumptions. We show that prediction tools should be handled with care, in particular by properly specifying models and estimators.

Entities:  

Keywords:  Competing risks; dynamic prediction; joint modelling; landmarking; prediction accuracy; robustness

Year:  2018        PMID: 30463497     DOI: 10.1177/0962280218811837

Source DB:  PubMed          Journal:  Stat Methods Med Res        ISSN: 0962-2802            Impact factor:   3.021


  12 in total

1.  Time-varying associations between an exposure history and a subsequent health outcome: a landmark approach to identify critical windows.

Authors:  Cécilia Samieri; Cécile Proust-Lima; Maude Wagner; Francine Grodstein; Karen Leffondre
Journal:  BMC Med Res Methodol       Date:  2021-11-27       Impact factor: 4.615

2.  Modelling of viral load dynamics and CD4 cell count progression in an antiretroviral naive cohort: using a joint linear mixed and multistate Markov model.

Authors:  Zelalem G Dessie; Temesgen Zewotir; Henry Mwambi; Delia North
Journal:  BMC Infect Dis       Date:  2020-03-26       Impact factor: 3.090

3.  Improved Landmark Dynamic Prediction Model to Assess Cardiovascular Disease Risk in On-Treatment Blood Pressure Patients: A Simulation Study and Post Hoc Analysis on SPRINT Data.

Authors:  Mehrab Sayadi; Najaf Zare; Armin Attar; Seyyed Mohammad Taghi Ayatollahi
Journal:  Biomed Res Int       Date:  2020-04-22       Impact factor: 3.411

4.  Comparison of methods for predicting COVID-19-related death in the general population using the OpenSAFELY platform.

Authors:  Elizabeth J Williamson; John Tazare; Liam Smeeth; Ben Goldacre; Krishnan Bhaskaran; Helen I McDonald; Alex J Walker; Laurie Tomlinson; Kevin Wing; Sebastian Bacon; Chris Bates; Helen J Curtis; Harriet J Forbes; Caroline Minassian; Caroline E Morton; Emily Nightingale; Amir Mehrkar; David Evans; Brian D Nicholson; David A Leon; Peter Inglesby; Brian MacKenna; Nicholas G Davies; Nicholas J DeVito; Henry Drysdale; Jonathan Cockburn; William J Hulme; Jessica Morley; Ian Douglas; Christopher T Rentsch; Rohini Mathur; Angel Wong; Anna Schultze; Richard Croker; John Parry; Frank Hester; Sam Harper; Richard Grieve; David A Harrison; Ewout W Steyerberg; Rosalind M Eggo; Karla Diaz-Ordaz; Ruth Keogh; Stephen J W Evans
Journal:  Diagn Progn Res       Date:  2022-02-24

5.  Missing link survival analysis with applications to available pandemic data.

Authors:  María Luz Gámiz; Enno Mammen; María Dolores Martínez-Miranda; Jens Perch Nielsen
Journal:  Comput Stat Data Anal       Date:  2021-12-13       Impact factor: 1.681

6.  Individual dynamic prediction of clinical endpoint from large dimensional longitudinal biomarker history: a landmark approach.

Authors:  Anthony Devaux; Robin Genuer; Karine Peres; Cécile Proust-Lima
Journal:  BMC Med Res Methodol       Date:  2022-07-11       Impact factor: 4.612

7.  A Gaussian copula approach for dynamic prediction of survival with a longitudinal biomarker.

Authors:  Krithika Suresh; Jeremy M G Taylor; Alexander Tsodikov
Journal:  Biostatistics       Date:  2021-07-17       Impact factor: 5.899

8.  Reflection on modern methods: Dynamic prediction using joint models of longitudinal and time-to-event data.

Authors:  Eleni-Rosalina Andrinopoulou; Michael O Harhay; Sarah J Ratcliffe; Dimitris Rizopoulos
Journal:  Int J Epidemiol       Date:  2021-11-10       Impact factor: 7.196

Review 9.  Harnessing repeated measurements of predictor variables for clinical risk prediction: a review of existing methods.

Authors:  Lucy M Bull; Mark Lunt; Glen P Martin; Kimme Hyrich; Jamie C Sergeant
Journal:  Diagn Progn Res       Date:  2020-07-09

10.  Individualized dynamic prediction of survival with the presence of intermediate events.

Authors:  Grigorios Papageorgiou; Mostafa M Mokhles; Johanna J M Takkenberg; Dimitris Rizopoulos
Journal:  Stat Med       Date:  2019-10-30       Impact factor: 2.373

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