Literature DB >> 31820798

A Gaussian copula approach for dynamic prediction of survival with a longitudinal biomarker.

Krithika Suresh1, Jeremy M G Taylor2, Alexander Tsodikov2.   

Abstract

Dynamic prediction uses patient information collected during follow-up to produce individualized survival predictions at given time points beyond treatment or diagnosis. This allows clinicians to obtain updated predictions of a patient's prognosis that can be used in making personalized treatment decisions. Two commonly used approaches for dynamic prediction are landmarking and joint modeling. Landmarking does not constitute a comprehensive probability model, and joint modeling often requires strong distributional assumptions and computationally intensive methods for estimation. We introduce an alternative approximate approach for dynamic prediction that aims to overcome the limitations of both methods while achieving good predictive performance. We separately specify the marker and failure time distributions conditional on surviving up to a prediction time of interest and use standard variable selection and goodness-of-fit techniques to identify the best-fitting models. Taking advantage of its analytic tractability and easy two-stage estimation, we use a Gaussian copula to link the marginal distributions smoothly at each prediction time with an association function. With simulation studies, we examine the proposed method's performance. We illustrate its use for dynamic prediction in an application to predicting death for heart valve transplant patients using longitudinal left ventricular mass index information.
© The Author 2019. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  Dynamic prediction; Gaussian copula; Joint modeling; Landmarking; Longitudinal data; Survival analysis

Mesh:

Substances:

Year:  2021        PMID: 31820798      PMCID: PMC8561844          DOI: 10.1093/biostatistics/kxz049

Source DB:  PubMed          Journal:  Biostatistics        ISSN: 1465-4644            Impact factor:   5.899


  17 in total

1.  Joint modelling of longitudinal measurements and event time data.

Authors:  R Henderson; P Diggle; A Dobson
Journal:  Biostatistics       Date:  2000-12       Impact factor: 5.899

2.  Longitudinal study of the profile and predictors of left ventricular mass regression after stentless aortic valve replacement.

Authors:  Eric Lim; Ayyaz Ali; Panagiotis Theodorou; Ines Sousa; Hutan Ashrafian; Themis Chamageorgakis; Alison Duncan; Michael Henein; Peter Diggle; John Pepper
Journal:  Ann Thorac Surg       Date:  2008-06       Impact factor: 4.330

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Authors:  Peter X-K Song; Mingyao Li; Ying Yuan
Journal:  Biometrics       Date:  2008-05-28       Impact factor: 2.571

4.  A joint model for survival and longitudinal data measured with error.

Authors:  M S Wulfsohn; A A Tsiatis
Journal:  Biometrics       Date:  1997-03       Impact factor: 2.571

5.  A Copula Approach to Joint Modeling of Longitudinal Measurements and Survival Times Using Monte Carlo Expectation-Maximization with Application to AIDS Studies.

Authors:  M Ganjali; T Baghfalaki
Journal:  J Biopharm Stat       Date:  2014-11-05       Impact factor: 1.051

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Authors:  Loïc Ferrer; Hein Putter; Cécile Proust-Lima
Journal:  Stat Methods Med Res       Date:  2018-11-22       Impact factor: 3.021

7.  Comparison of joint modeling and landmarking for dynamic prediction under an illness-death model.

Authors:  Krithika Suresh; Jeremy M G Taylor; Daniel E Spratt; Stephanie Daignault; Alexander Tsodikov
Journal:  Biom J       Date:  2017-05-16       Impact factor: 2.207

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Authors:  Takeshi Emura; Masahiro Nakatochi; Shigeyuki Matsui; Hirofumi Michimae; Virginie Rondeau
Journal:  Stat Methods Med Res       Date:  2017-01-16       Impact factor: 3.021

9.  Longitudinal data analysis for discrete and continuous outcomes.

Authors:  S L Zeger; K Y Liang
Journal:  Biometrics       Date:  1986-03       Impact factor: 2.571

10.  Real-time individual predictions of prostate cancer recurrence using joint models.

Authors:  Jeremy M G Taylor; Yongseok Park; Donna P Ankerst; Cecile Proust-Lima; Scott Williams; Larry Kestin; Kyoungwha Bae; Tom Pickles; Howard Sandler
Journal:  Biometrics       Date:  2013-02-04       Impact factor: 2.571

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1.  Dynamic prediction for clinically relevant pancreatic fistula: a novel prediction model for laparoscopic pancreaticoduodenectomy.

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Journal:  BMC Surg       Date:  2021-01-04       Impact factor: 2.102

  1 in total

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