Literature DB >> 30446142

The exopolysaccharide properties and structures database: EPS-DB. Application to bacterial exopolysaccharides.

Johnny Birch1, Marie-Rose Van Calsteren2, Serge Pérez3, Birte Svensson4.   

Abstract

The EPS Database (EPS-DB) is a web-based, platform-independent database of bacterial exopolysaccharides (EPSs) providing access to detailed structural, taxonomic, growth conditions, functional properties, genetic, and bibliographic information for EPSs. It is freely available on the Internet as a website at http://www.epsdatabase.com. Several structural data representation schemes are used following the most commonly accepted formats. This guarantees full interoperability with other structural, experimental, and functional databases in the area of glycoscience. The scientific usage of EPS-DB throughout a user-friendly interface is presented with a subsection of the database exemplified by EPSs from lactic acid bacteria.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Database; Exopolysaccharide structure; Function; Genetics; Search; Sequence of residues

Mesh：

Substances：

Year:  2018        PMID： 30446142     DOI： 10.1016/j.carbpol.2018.10.063

Source DB:  PubMed          Journal:  Carbohydr Polym        ISSN： 0144-8617            Impact factor:   9.381


  8 in total

1.  Effects of GSM 1800 band radiation on composition, structure and bioactivity of exopolysaccharides produced by yoghurt starter cultures.

Authors:  Seyda Merve Karatas; Lutfiye Ekici; Ibrahim Develi; Enes Dertli; Osman Sagdic
Journal:  Arch Microbiol       Date:  2021-01-18       Impact factor: 2.552

2.  Detection, Isolation, and Purification of Bifidobacterial Exopolysaccharides.

Authors:  Patricia Ruas-Madiedo
Journal:  Methods Mol Biol       Date:  2021

Review 3.  Advancing Solutions to the Carbohydrate Sequencing Challenge.

Authors:  Christopher J Gray; Lukasz G Migas; Perdita E Barran; Kevin Pagel; Peter H Seeberger; Claire E Eyers; Geert-Jan Boons; Nicola L B Pohl; Isabelle Compagnon; Göran Widmalm; Sabine L Flitsch
Journal:  J Am Chem Soc       Date:  2019-08-21       Impact factor: 16.383

4.  Selection of Wild Lactic Acid Bacteria Strains as Promoters of Postbiotics in Gluten-Free Sourdoughs.

Authors:  Bogdan Păcularu-Burada; Luminița Anca Georgescu; Mihaela Aida Vasile; João Miguel Rocha; Gabriela-Elena Bahrim
Journal:  Microorganisms       Date:  2020-04-28

5.  Binding Sites for Oligosaccharide Repeats from Lactic Acid Bacteria Exopolysaccharides on Bovine β-Lactoglobulin Identified by NMR Spectroscopy.

Authors:  Johnny Birch; Sanaullah Khan; Mikkel Madsen; Christian Kjeldsen; Marie Sofie Møller; Emil G P Stender; Günther H J Peters; Jens Ø Duus; Birthe B Kragelund; Birte Svensson
Journal:  ACS Omega       Date:  2021-03-23

Review 6.  Variability of Bacterial Homopolysaccharide Production and Properties during Food Processing.

Authors:  Marion Nabot; Marie Guérin; Dharini Sivakumar; Fabienne Remize; Cyrielle Garcia
Journal:  Biology (Basel)       Date:  2022-01-21

7.  Isolation and characterization of an exopolymer produced by Bacillus licheniformis: In vitro antiviral activity against enveloped viruses.

Authors:  E Sánchez-León; R Bello-Morales; J A López-Guerrero; A Poveda; J Jiménez-Barbero; N Gironès; C Abrusci
Journal:  Carbohydr Polym       Date:  2020-07-08       Impact factor: 9.381

Review 8.  Three-Dimensional Structures of Carbohydrates and Where to Find Them.

Authors:  Sofya I Scherbinina; Philip V Toukach
Journal:  Int J Mol Sci       Date:  2020-10-18       Impact factor: 5.923
  8 in total

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