| Literature DB >> 30443393 |
Lygia S de Moraes1, Alan R Kennedy1, Charlie R Logan1.
Abstract
The structures of three monohydrated halide salt forms of l-asparagine are presented, viz. l-asparaginium chloride monohydrate, C4H9N2O3 +·Cl-·H2O, (I), l-asparaginium bromide monohydrate, C4H9N2O3 +·Br-·H2O, (II), and l-asparaginium iodide monohydrate, C4H9N2O3 +·I-·H2O, (III). These form an isomorphous and isostructural series. The C-C-C-C backbone of the amino acid adopts a gauche conformation in each case [torsion angles for (I), (II) and (III) = -55.4 (2), -55.6 (5) and -58.3 (7)°, respectively]. Each cation features an intra-molecular N-H⋯O hydrogen bond, which closes an S(6) ring. The extended structures feature chains of cations that propagate parallel to the b-axis direction. These are formed by carb-oxy-lic acid/amide complimentary O-H⋯O + N-H⋯O hydrogen bonds, which generate R 2 2(8) loops. These chains are linked by further hydrogen bonds mediated by the halide ions and water mol-ecules to give a layered structure with cation and anion layers parallel to the ab plane. Compound (III) was refined as an inversion twin.Entities:
Keywords: amino-acid; crystal structure; isostructural series; salt selections
Year: 2018 PMID: 30443393 PMCID: PMC6218909 DOI: 10.1107/S2056989018014603
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1View of the contents of the asymmetric unit of (I). Non-H atoms are drawn as 50% probability ellipsoids and H atoms as spheres of arbitrary size.
Figure 2View of the contents of the asymmetric unit of (II). Non-H atoms are drawn as 50% probability ellipsoids and H atoms as spheres of arbitrary size.
Figure 3View of the contents of the asymmetric unit of (III). Non-H atoms are drawn as 50% probability ellipsoids and H atoms as spheres of arbitrary size.
Hydrogen-bond geometry (Å, °) for (I)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O2—H1 | 0.88 (1) | 1.66 (2) | 2.533 (2) | 172 (4) |
| N1—H1 | 0.91 (1) | 2.27 (1) | 3.1663 (17) | 166 (2) |
| N1—H2 | 0.89 (1) | 2.56 (2) | 3.2909 (17) | 140 (2) |
| N1—H2 | 0.89 (1) | 2.19 (2) | 2.809 (2) | 126 (2) |
| N1—H3 | 0.90 (1) | 1.97 (1) | 2.867 (2) | 172 (2) |
| N2—H4 | 0.90 (1) | 2.89 (2) | 3.4056 (17) | 118 (2) |
| N2—H4 | 0.90 (1) | 2.21 (2) | 3.051 (2) | 156 (2) |
| N2—H5 | 0.88 (1) | 2.08 (1) | 2.949 (2) | 167 (2) |
| O1 | 0.87 (1) | 2.41 (1) | 3.2650 (18) | 169 (2) |
| O1 | 0.87 (1) | 2.40 (2) | 3.2184 (17) | 157 (2) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .
Hydrogen-bond geometry (Å, °) for (II)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O2—H1 | 0.88 (1) | 1.68 (2) | 2.543 (4) | 167 (6) |
| N1—H1 | 0.90 (1) | 2.46 (2) | 3.314 (5) | 159 (4) |
| N1—H2 | 0.89 (1) | 2.59 (3) | 3.408 (5) | 153 (4) |
| N1—H2 | 0.89 (1) | 2.30 (5) | 2.787 (6) | 114 (4) |
| N1—H3 | 0.90 (1) | 1.99 (2) | 2.886 (4) | 173 (5) |
| N2—H4 | 0.90 (1) | 2.95 (4) | 3.479 (4) | 119 (4) |
| N2—H4 | 0.90 (1) | 2.26 (3) | 3.081 (5) | 152 (4) |
| N2—H5 | 0.90 (1) | 2.07 (2) | 2.959 (6) | 170 (5) |
| O1 | 0.88 (1) | 2.51 (2) | 3.362 (4) | 167 (5) |
| O1 | 0.88 (1) | 2.61 (4) | 3.323 (4) | 138 (5) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .
Hydrogen-bond geometry (Å, °) for (III)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O2—H1 | 0.88 (1) | 1.71 (3) | 2.549 (6) | 160 (9) |
| N1—H1 | 0.91 | 2.65 | 3.528 (7) | 164 |
| N1—H2 | 0.91 | 2.89 | 3.591 (8) | 135 |
| N1—H2 | 0.91 | 2.11 | 2.766 (8) | 129 |
| N1—H3 | 0.91 | 2.03 | 2.905 (6) | 160 |
| N2—H4 | 0.90 (1) | 3.07 (6) | 3.659 (5) | 125 (5) |
| N2—H4 | 0.90 (1) | 2.37 (4) | 3.171 (7) | 149 (6) |
| N2—H5 | 0.90 (1) | 2.12 (3) | 2.983 (9) | 160 (7) |
| O1 | 0.88 (1) | 2.68 (2) | 3.526 (8) | 164 (5) |
| O1 | 0.88 (1) | 2.76 (4) | 3.504 (7) | 143 (6) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .
Figure 4View of all the unique hydrogen-bonding contacts made by the contents of the asymmetric unit of (I).
Figure 5Chain of cations in (II) propagating parallel to the b-axis direction via O—H⋯O and O—H⋯N carboxylic acid to amide hydrogen bonds.
Figure 6Packing diagram of (III) as viewed down the a-axis direction.
Experimental details
| (I) | (II) | (III) | |
|---|---|---|---|
| Crystal data | |||
| Chemical formula | C4H9N2O3 +·Cl−·H2O | C4H9N2O3 −·Br+·H2O | C4H9N2O3 +·I−·H2O |
|
| 186.60 | 231.06 | 278.05 |
| Crystal system, space group | Monoclinic, | Monoclinic, | Monoclinic, |
| Temperature (K) | 123 | 123 | 123 |
|
| 5.0922 (1), 10.1450 (2), 8.1950 (2) | 5.2167 (2), 10.2784 (5), 8.3063 (4) | 5.3668 (5), 10.6744 (8), 8.4532 (6) |
| β (°) | 103.834 (2) | 103.606 (5) | 102.772 (8) |
|
| 411.08 (2) | 432.88 (4) | 472.28 (7) |
|
| 2 | 2 | 2 |
| Radiation type | Mo | Mo | Mo |
| μ (mm−1) | 0.44 | 4.72 | 3.37 |
| Crystal size (mm) | 0.45 × 0.30 × 0.25 | 0.5 × 0.3 × 0.12 | 0.6 × 0.35 × 0.15 |
| Data collection | |||
| Diffractometer | Oxford Diffraction Xcalibur E | Oxford Diffraction Xcalibur E | Oxford Diffraction Xcalibur E |
| Absorption correction | Multi-scan [ | Analytical [ | Analytical [ |
|
| 0.900, 1.000 | 0.205, 0.487 | 0.286, 0.612 |
| No. of measured, independent and observed [ | 4053, 2079, 2032 | 4320, 2232, 2118 | 5854, 2458, 2288 |
|
| 0.013 | 0.032 | 0.039 |
| (sin θ/λ)max (Å−1) | 0.698 | 0.700 | 0.702 |
| Refinement | |||
|
| 0.022, 0.058, 1.07 | 0.028, 0.062, 1.03 | 0.029, 0.058, 1.02 |
| No. of reflections | 2079 | 2232 | 2458 |
| No. of parameters | 128 | 128 | 117 |
| No. of restraints | 9 | 9 | 7 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement | H atoms treated by a mixture of independent and constrained refinement | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.26, −0.20 | 0.60, −0.38 | 0.87, −0.65 |
| Absolute structure | Flack | Flack | Refined as an inversion twin |
| Absolute structure parameter | −0.02 (2) | −0.022 (11) | −0.07 (4) |
Computer programs: CrysAlis PRO (Agilent, 2014 ▸), SIR92 (Altomare et al., 1994 ▸), SHELXL2014 (Sheldrick, 2015 ▸) and Mercury (Macrae et al., 2008 ▸).
| C4H9N2O3+·Cl−·H2O | |
| Monoclinic, | Mo |
| Cell parameters from 3444 reflections | |
| θ = 3.3–29.7° | |
| µ = 0.44 mm−1 | |
| β = 103.834 (2)° | |
| Prism, colourless | |
| 0.45 × 0.30 × 0.25 mm |
| Oxford Diffraction Xcalibur E diffractometer | 2032 reflections with |
| Radiation source: sealed tube | |
| ω scans | θmax = 29.8°, θmin = 3.3° |
| Absorption correction: multi-scan [CrysAlis PRO (Agilent, 2014), based on expressions derived by Clark & Reid (1995)] | |
| 4053 measured reflections | |
| 2079 independent reflections |
| Refinement on | H atoms treated by a mixture of independent and constrained refinement |
| Least-squares matrix: full | |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.26 e Å−3 | |
| Δρmin = −0.20 e Å−3 | |
| 2079 reflections | Extinction correction: SHELXL-2014/7 (Sheldrick 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| 128 parameters | Extinction coefficient: 0.029 (8) |
| 9 restraints | Absolute structure: Flack |
| Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.02 (2) |
| Hydrogen site location: mixed |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Cl1 | 0.36571 (8) | 0.90075 (4) | 0.92401 (5) | 0.02062 (13) | |
| O1 | 1.1145 (3) | 0.51257 (16) | 0.77258 (18) | 0.0258 (3) | |
| O2 | 0.8130 (3) | 0.48931 (15) | 0.52673 (18) | 0.0237 (3) | |
| O3 | 0.8617 (3) | 0.83494 (16) | 0.56812 (17) | 0.0269 (3) | |
| O1W | 1.1611 (3) | 0.58702 (15) | 1.1607 (2) | 0.0242 (3) | |
| H1W | 1.275 (4) | 0.528 (2) | 1.142 (3) | 0.029* | |
| H2W | 1.034 (4) | 0.532 (2) | 1.170 (3) | 0.029* | |
| N1 | 0.8288 (3) | 0.71004 (16) | 0.8685 (2) | 0.0162 (3) | |
| H1N | 0.699 (4) | 0.758 (2) | 0.902 (3) | 0.019* | |
| H2N | 0.936 (4) | 0.764 (2) | 0.827 (3) | 0.019* | |
| H3N | 0.927 (4) | 0.664 (2) | 0.957 (2) | 0.019* | |
| N2 | 0.5625 (4) | 0.78473 (17) | 0.3247 (2) | 0.0218 (4) | |
| C1 | 0.8969 (4) | 0.53507 (18) | 0.6792 (2) | 0.0153 (3) | |
| C2 | 0.6864 (4) | 0.61977 (17) | 0.7318 (2) | 0.0140 (3) | |
| H1 | 0.5703 | 0.5597 | 0.7813 | 0.017* | |
| C3 | 0.5009 (4) | 0.69279 (18) | 0.5859 (2) | 0.0162 (3) | |
| H2 | 0.3900 | 0.6278 | 0.5091 | 0.019* | |
| H3 | 0.3765 | 0.7499 | 0.6304 | 0.019* | |
| C4 | 0.6548 (4) | 0.77587 (19) | 0.4888 (2) | 0.0170 (4) | |
| H1H | 0.936 (6) | 0.437 (3) | 0.503 (5) | 0.067 (11)* | |
| H4N | 0.643 (4) | 0.8399 (19) | 0.266 (3) | 0.019 (6)* | |
| H5N | 0.423 (4) | 0.736 (2) | 0.273 (3) | 0.023 (6)* |
| Cl1 | 0.01624 (19) | 0.0241 (2) | 0.0209 (2) | 0.00077 (17) | 0.00325 (14) | −0.00539 (18) |
| O1 | 0.0182 (7) | 0.0346 (8) | 0.0224 (7) | 0.0096 (6) | 0.0008 (5) | −0.0059 (6) |
| O2 | 0.0211 (7) | 0.0281 (8) | 0.0204 (7) | 0.0067 (6) | 0.0020 (5) | −0.0079 (6) |
| O3 | 0.0222 (7) | 0.0359 (8) | 0.0199 (7) | −0.0128 (6) | 0.0000 (6) | 0.0078 (6) |
| O1W | 0.0252 (8) | 0.0200 (7) | 0.0270 (8) | −0.0019 (6) | 0.0051 (6) | −0.0003 (6) |
| N1 | 0.0150 (8) | 0.0182 (8) | 0.0156 (8) | 0.0008 (6) | 0.0040 (6) | −0.0019 (6) |
| N2 | 0.0265 (9) | 0.0217 (8) | 0.0163 (7) | −0.0029 (7) | 0.0034 (7) | 0.0011 (6) |
| C1 | 0.0149 (8) | 0.0149 (8) | 0.0168 (8) | −0.0014 (6) | 0.0052 (6) | 0.0014 (6) |
| C2 | 0.0123 (8) | 0.0149 (8) | 0.0152 (8) | −0.0006 (6) | 0.0039 (6) | −0.0007 (6) |
| C3 | 0.0129 (8) | 0.0186 (8) | 0.0166 (8) | 0.0004 (7) | 0.0026 (6) | 0.0023 (7) |
| C4 | 0.0168 (8) | 0.0163 (8) | 0.0183 (8) | 0.0023 (6) | 0.0046 (7) | 0.0023 (6) |
| O1—C1 | 1.209 (2) | N2—C4 | 1.317 (2) |
| O2—C1 | 1.305 (2) | N2—H4N | 0.897 (12) |
| O2—H1H | 0.876 (13) | N2—H5N | 0.882 (13) |
| O3—C4 | 1.251 (2) | C1—C2 | 1.515 (2) |
| O1W—H1W | 0.869 (13) | C2—C3 | 1.527 (2) |
| O1W—H2W | 0.868 (13) | C2—H1 | 1.0000 |
| N1—C2 | 1.493 (2) | C3—C4 | 1.502 (3) |
| N1—H1N | 0.913 (13) | C3—H2 | 0.9900 |
| N1—H2N | 0.891 (13) | C3—H3 | 0.9900 |
| N1—H3N | 0.901 (12) | ||
| C1—O2—H1H | 110 (3) | N1—C2—C3 | 112.85 (15) |
| H1W—O1W—H2W | 97 (3) | C1—C2—C3 | 113.57 (15) |
| C2—N1—H1N | 107.3 (15) | N1—C2—H1 | 107.3 |
| C2—N1—H2N | 108.8 (17) | C1—C2—H1 | 107.3 |
| H1N—N1—H2N | 110 (2) | C3—C2—H1 | 107.3 |
| C2—N1—H3N | 111.2 (16) | C4—C3—C2 | 112.56 (15) |
| H1N—N1—H3N | 109 (2) | C4—C3—H2 | 109.1 |
| H2N—N1—H3N | 110 (2) | C2—C3—H2 | 109.1 |
| C4—N2—H4N | 119.5 (15) | C4—C3—H3 | 109.1 |
| C4—N2—H5N | 119.9 (17) | C2—C3—H3 | 109.1 |
| H4N—N2—H5N | 121 (2) | H2—C3—H3 | 107.8 |
| O1—C1—O2 | 125.44 (17) | O3—C4—N2 | 123.25 (18) |
| O1—C1—C2 | 122.06 (16) | O3—C4—C3 | 118.34 (16) |
| O2—C1—C2 | 112.48 (15) | N2—C4—C3 | 118.40 (17) |
| N1—C2—C1 | 108.17 (14) | ||
| O1—C1—C2—N1 | 24.6 (2) | N1—C2—C3—C4 | 68.1 (2) |
| O2—C1—C2—N1 | −156.61 (16) | C1—C2—C3—C4 | −55.4 (2) |
| O1—C1—C2—C3 | 150.72 (17) | C2—C3—C4—O3 | −37.7 (2) |
| O2—C1—C2—C3 | −30.5 (2) | C2—C3—C4—N2 | 143.49 (18) |
| H··· | ||||
| O2—H1 | 0.88 (1) | 1.66 (2) | 2.533 (2) | 172 (4) |
| N1—H1 | 0.91 (1) | 2.27 (1) | 3.1663 (17) | 166 (2) |
| N1—H2 | 0.89 (1) | 2.56 (2) | 3.2909 (17) | 140 (2) |
| N1—H2 | 0.89 (1) | 2.19 (2) | 2.809 (2) | 126 (2) |
| N1—H3 | 0.90 (1) | 1.97 (1) | 2.867 (2) | 172 (2) |
| N2—H4 | 0.90 (1) | 2.89 (2) | 3.4056 (17) | 118 (2) |
| N2—H4 | 0.90 (1) | 2.21 (2) | 3.051 (2) | 156 (2) |
| N2—H5 | 0.88 (1) | 2.08 (1) | 2.949 (2) | 167 (2) |
| O1 | 0.87 (1) | 2.41 (1) | 3.2650 (18) | 169 (2) |
| O1 | 0.87 (1) | 2.40 (2) | 3.2184 (17) | 157 (2) |
| C4H9N2O3−·Br+·H2O | |
| Monoclinic, | Mo |
| Cell parameters from 3145 reflections | |
| θ = 3.2–29.8° | |
| µ = 4.72 mm−1 | |
| β = 103.606 (5)° | |
| Tablet, colourless | |
| 0.5 × 0.3 × 0.12 mm |
| Oxford Diffraction Xcalibur E diffractometer | 2232 independent reflections |
| Radiation source: fine-focus sealed tube | 2118 reflections with |
| Graphite monochromator | |
| ω scans | θmax = 29.8°, θmin = 3.2° |
| Absorption correction: analytical [CrysAlis PRO (Agilent, 2014), based on expressions derived by Clark & Reid (1995)] | |
| 4320 measured reflections |
| Refinement on | H atoms treated by a mixture of independent and constrained refinement |
| Least-squares matrix: full | |
| (Δ/σ)max = 0.001 | |
| Δρmax = 0.60 e Å−3 | |
| Δρmin = −0.38 e Å−3 | |
| 2232 reflections | Extinction correction: SHELXL2014 (Sheldrick, 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| 128 parameters | Extinction coefficient: 0.019 (3) |
| 9 restraints | Absolute structure: Flack |
| Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.022 (11) |
| Hydrogen site location: mixed |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Br1 | 0.36490 (6) | 0.90306 (8) | 0.92345 (4) | 0.01479 (13) | |
| O1 | 1.1176 (6) | 0.5163 (3) | 0.7609 (4) | 0.0196 (7) | |
| O2 | 0.8106 (6) | 0.4779 (3) | 0.5270 (4) | 0.0187 (7) | |
| O3 | 0.8665 (6) | 0.8262 (3) | 0.5653 (4) | 0.0226 (7) | |
| O1W | 1.1602 (8) | 0.5964 (4) | 1.1565 (6) | 0.0196 (9) | |
| H1W | 1.274 (8) | 0.536 (4) | 1.147 (7) | 0.024* | |
| H2W | 1.059 (10) | 0.541 (5) | 1.193 (7) | 0.024* | |
| N1 | 0.8287 (9) | 0.7034 (5) | 0.8580 (6) | 0.0124 (9) | |
| H1N | 0.716 (8) | 0.749 (4) | 0.903 (6) | 0.015* | |
| H2N | 0.951 (8) | 0.757 (4) | 0.836 (6) | 0.015* | |
| H3N | 0.932 (8) | 0.663 (5) | 0.947 (4) | 0.015* | |
| N2 | 0.5699 (7) | 0.7822 (4) | 0.3244 (4) | 0.0169 (8) | |
| C1 | 0.8998 (8) | 0.5314 (4) | 0.6731 (5) | 0.0124 (8) | |
| C2 | 0.6900 (8) | 0.6143 (4) | 0.7242 (5) | 0.0109 (8) | |
| H1 | 0.5765 | 0.5549 | 0.7729 | 0.013* | |
| C3 | 0.5124 (8) | 0.6858 (4) | 0.5811 (5) | 0.0130 (8) | |
| H2 | 0.4071 | 0.6215 | 0.5044 | 0.016* | |
| H3 | 0.3884 | 0.7411 | 0.6243 | 0.016* | |
| C4 | 0.6627 (8) | 0.7697 (4) | 0.4866 (5) | 0.0132 (8) | |
| H1H | 0.938 (9) | 0.428 (5) | 0.509 (8) | 0.046 (18)* | |
| H4N | 0.645 (9) | 0.837 (4) | 0.265 (5) | 0.016 (12)* | |
| H5N | 0.431 (7) | 0.733 (4) | 0.276 (6) | 0.016 (14)* |
| Br1 | 0.01205 (18) | 0.01658 (19) | 0.01513 (18) | 0.0006 (2) | 0.00197 (12) | −0.0034 (2) |
| O1 | 0.0120 (15) | 0.0263 (18) | 0.0185 (16) | 0.0072 (13) | −0.0002 (13) | −0.0061 (13) |
| O2 | 0.0148 (14) | 0.0238 (17) | 0.0159 (15) | 0.0046 (13) | 0.0003 (12) | −0.0062 (13) |
| O3 | 0.0176 (16) | 0.0309 (19) | 0.0159 (15) | −0.0127 (13) | −0.0031 (13) | 0.0076 (14) |
| O1W | 0.015 (2) | 0.018 (2) | 0.025 (2) | −0.0018 (17) | 0.0022 (16) | 0.0001 (17) |
| N1 | 0.013 (2) | 0.012 (2) | 0.012 (2) | 0.0026 (18) | 0.0035 (17) | −0.0018 (17) |
| N2 | 0.0205 (19) | 0.0169 (18) | 0.0123 (17) | −0.0031 (16) | 0.0013 (15) | 0.0014 (14) |
| C1 | 0.014 (2) | 0.0102 (18) | 0.0142 (19) | −0.0021 (15) | 0.0056 (16) | 0.0019 (15) |
| C2 | 0.0072 (18) | 0.0129 (19) | 0.0124 (18) | −0.0021 (15) | 0.0020 (15) | −0.0005 (15) |
| C3 | 0.0092 (18) | 0.014 (2) | 0.016 (2) | −0.0008 (16) | 0.0018 (16) | 0.0003 (16) |
| C4 | 0.0135 (19) | 0.0099 (19) | 0.0158 (19) | 0.0025 (16) | 0.0024 (16) | 0.0017 (15) |
| O1—C1 | 1.207 (5) | N2—C4 | 1.326 (5) |
| O2—C1 | 1.314 (5) | N2—H4N | 0.898 (14) |
| O2—H1H | 0.879 (14) | N2—H5N | 0.897 (14) |
| O3—C4 | 1.252 (5) | C1—C2 | 1.524 (6) |
| O1W—H1W | 0.875 (14) | C2—C3 | 1.515 (6) |
| O1W—H2W | 0.879 (14) | C2—H1 | 1.0000 |
| N1—C2 | 1.490 (6) | C3—C4 | 1.504 (6) |
| N1—H1N | 0.900 (14) | C3—H2 | 0.9900 |
| N1—H2N | 0.894 (14) | C3—H3 | 0.9900 |
| N1—H3N | 0.904 (14) | ||
| C1—O2—H1H | 106 (4) | N1—C2—C1 | 107.3 (3) |
| H1W—O1W—H2W | 93 (5) | C3—C2—C1 | 113.5 (3) |
| C2—N1—H1N | 112 (3) | N1—C2—H1 | 107.7 |
| C2—N1—H2N | 118 (3) | C3—C2—H1 | 107.7 |
| H1N—N1—H2N | 109 (5) | C1—C2—H1 | 107.7 |
| C2—N1—H3N | 115 (4) | C4—C3—C2 | 113.0 (3) |
| H1N—N1—H3N | 102 (4) | C4—C3—H2 | 109.0 |
| H2N—N1—H3N | 98 (5) | C2—C3—H2 | 109.0 |
| C4—N2—H4N | 121 (3) | C4—C3—H3 | 109.0 |
| C4—N2—H5N | 118 (3) | C2—C3—H3 | 109.0 |
| H4N—N2—H5N | 121 (5) | H2—C3—H3 | 107.8 |
| O1—C1—O2 | 125.7 (4) | O3—C4—N2 | 123.2 (4) |
| O1—C1—C2 | 122.6 (4) | O3—C4—C3 | 118.4 (4) |
| O2—C1—C2 | 111.7 (4) | N2—C4—C3 | 118.4 (4) |
| N1—C2—C3 | 112.8 (3) | ||
| O1—C1—C2—N1 | 20.2 (5) | N1—C2—C3—C4 | 66.7 (5) |
| O2—C1—C2—N1 | −161.4 (4) | C1—C2—C3—C4 | −55.6 (5) |
| O1—C1—C2—C3 | 145.4 (4) | C2—C3—C4—O3 | −35.7 (5) |
| O2—C1—C2—C3 | −36.1 (5) | C2—C3—C4—N2 | 145.6 (4) |
| H··· | ||||
| O2—H1 | 0.88 (1) | 1.68 (2) | 2.543 (4) | 167 (6) |
| N1—H1 | 0.90 (1) | 2.46 (2) | 3.314 (5) | 159 (4) |
| N1—H2 | 0.89 (1) | 2.59 (3) | 3.408 (5) | 153 (4) |
| N1—H2 | 0.89 (1) | 2.30 (5) | 2.787 (6) | 114 (4) |
| N1—H3 | 0.90 (1) | 1.99 (2) | 2.886 (4) | 173 (5) |
| N2—H4 | 0.90 (1) | 2.95 (4) | 3.479 (4) | 119 (4) |
| N2—H4 | 0.90 (1) | 2.26 (3) | 3.081 (5) | 152 (4) |
| N2—H5 | 0.90 (1) | 2.07 (2) | 2.959 (6) | 170 (5) |
| O1 | 0.88 (1) | 2.51 (2) | 3.362 (4) | 167 (5) |
| O1 | 0.88 (1) | 2.61 (4) | 3.323 (4) | 138 (5) |
| C4H9N2O3+·I−·H2O | |
| Monoclinic, | Mo |
| Cell parameters from 4015 reflections | |
| θ = 3.8–29.9° | |
| µ = 3.37 mm−1 | |
| β = 102.772 (8)° | |
| Fragment cut from long rod, colourless | |
| 0.6 × 0.35 × 0.15 mm |
| Oxford Diffraction Xcalibur E diffractometer | 2288 reflections with |
| Radiation source: sealed tube | |
| ω scans | θmax = 29.9°, θmin = 3.8° |
| Absorption correction: analytical [CrysAlis PRO (Agilent, 2014), based on expressions derived by Clark & Reid (1995)] | |
| 5854 measured reflections | |
| 2458 independent reflections |
| Refinement on | Hydrogen site location: mixed |
| Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
| (Δ/σ)max = 0.001 | |
| Δρmax = 0.87 e Å−3 | |
| 2458 reflections | Δρmin = −0.65 e Å−3 |
| 117 parameters | Absolute structure: Refined as an inversion twin |
| 7 restraints | Absolute structure parameter: −0.07 (4) |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refined as a two-component inversion twin. |
| I1 | 0.36921 (6) | 0.90844 (10) | 0.91430 (3) | 0.01907 (10) | |
| O1 | 1.1192 (8) | 0.5186 (4) | 0.7440 (5) | 0.0243 (10) | |
| O2 | 0.8070 (8) | 0.4561 (4) | 0.5384 (5) | 0.0258 (11) | |
| H1H | 0.936 (10) | 0.415 (8) | 0.516 (7) | 0.031* | |
| O3 | 0.8904 (9) | 0.7986 (4) | 0.5464 (5) | 0.0282 (11) | |
| O1W | 1.1491 (15) | 0.6160 (6) | 1.1460 (9) | 0.0274 (16) | |
| H1W | 1.253 (10) | 0.553 (4) | 1.143 (9) | 0.033* | |
| H2W | 1.029 (9) | 0.575 (5) | 1.181 (8) | 0.033* | |
| N1 | 0.8348 (14) | 0.6975 (7) | 0.8380 (8) | 0.0165 (16) | |
| H3N | 0.9372 | 0.6546 | 0.9205 | 0.025* | |
| H1N | 0.7172 | 0.7420 | 0.8773 | 0.025* | |
| H2N | 0.9315 | 0.7508 | 0.7926 | 0.025* | |
| N2 | 0.5817 (11) | 0.7743 (5) | 0.3201 (6) | 0.0224 (12) | |
| H5N | 0.428 (7) | 0.740 (6) | 0.277 (8) | 0.027* | |
| H4N | 0.636 (13) | 0.835 (5) | 0.262 (7) | 0.027* | |
| C1 | 0.9010 (11) | 0.5232 (5) | 0.6669 (7) | 0.0161 (12) | |
| C2 | 0.7013 (12) | 0.6073 (5) | 0.7127 (7) | 0.0155 (12) | |
| H2 | 0.5882 | 0.5537 | 0.7640 | 0.019* | |
| C3 | 0.5321 (12) | 0.6737 (6) | 0.5676 (7) | 0.0177 (12) | |
| H3A | 0.4349 | 0.6100 | 0.4937 | 0.021* | |
| H3B | 0.4074 | 0.7271 | 0.6067 | 0.021* | |
| C4 | 0.6816 (11) | 0.7537 (6) | 0.4743 (7) | 0.0181 (12) |
| I1 | 0.01668 (17) | 0.01986 (16) | 0.01982 (16) | 0.0013 (3) | 0.00223 (11) | −0.0036 (2) |
| O1 | 0.018 (2) | 0.029 (2) | 0.024 (2) | 0.009 (2) | −0.0010 (17) | −0.006 (2) |
| O2 | 0.016 (2) | 0.031 (2) | 0.029 (2) | 0.0061 (18) | 0.0031 (18) | −0.0140 (18) |
| O3 | 0.023 (3) | 0.034 (3) | 0.024 (2) | −0.011 (2) | −0.0023 (18) | 0.011 (2) |
| O1W | 0.025 (4) | 0.022 (4) | 0.034 (3) | −0.006 (3) | 0.003 (3) | 0.001 (3) |
| N1 | 0.013 (4) | 0.019 (4) | 0.018 (3) | 0.007 (3) | 0.005 (2) | 0.001 (3) |
| N2 | 0.025 (3) | 0.022 (3) | 0.019 (3) | −0.003 (2) | 0.002 (2) | 0.002 (2) |
| C1 | 0.017 (3) | 0.013 (3) | 0.018 (3) | 0.001 (2) | 0.004 (2) | 0.003 (2) |
| C2 | 0.015 (3) | 0.015 (3) | 0.016 (2) | −0.002 (2) | 0.003 (2) | −0.001 (2) |
| C3 | 0.014 (3) | 0.018 (3) | 0.020 (3) | 0.002 (3) | 0.002 (2) | 0.001 (2) |
| C4 | 0.016 (3) | 0.016 (3) | 0.022 (3) | 0.002 (2) | 0.004 (2) | 0.001 (2) |
| O1—C1 | 1.209 (7) | N2—C4 | 1.314 (7) |
| O2—C1 | 1.305 (7) | N2—H5N | 0.900 (14) |
| O2—H1H | 0.876 (14) | N2—H4N | 0.896 (14) |
| O3—C4 | 1.247 (7) | C1—C2 | 1.513 (8) |
| O1W—H2W | 0.880 (14) | C2—C3 | 1.529 (8) |
| O1W—H1W | 0.877 (14) | C2—H2 | 1.0000 |
| N1—C2 | 1.492 (9) | C3—C4 | 1.509 (9) |
| N1—H3N | 0.9100 | C3—H3A | 0.9900 |
| N1—H1N | 0.9100 | C3—H3B | 0.9900 |
| N1—H2N | 0.9100 | ||
| C1—O2—H1H | 106 (5) | N1—C2—C3 | 112.1 (5) |
| H1W—O1W—H2W | 98 (3) | C1—C2—C3 | 113.5 (5) |
| C2—N1—H3N | 109.5 | N1—C2—H2 | 107.7 |
| C2—N1—H1N | 109.5 | C1—C2—H2 | 107.7 |
| H3N—N1—H1N | 109.5 | C3—C2—H2 | 107.7 |
| C2—N1—H2N | 109.5 | C4—C3—C2 | 113.1 (5) |
| H3N—N1—H2N | 109.5 | C4—C3—H3A | 109.0 |
| H1N—N1—H2N | 109.5 | C2—C3—H3A | 109.0 |
| C4—N2—H5N | 118 (5) | C4—C3—H3B | 109.0 |
| C4—N2—H4N | 124 (5) | C2—C3—H3B | 109.0 |
| H4N—N2—H5N | 117 (7) | H3A—C3—H3B | 107.8 |
| O1—C1—O2 | 125.2 (6) | O3—C4—N2 | 123.1 (6) |
| O1—C1—C2 | 122.9 (5) | O3—C4—C3 | 119.1 (5) |
| O2—C1—C2 | 111.9 (5) | N2—C4—C3 | 117.8 (5) |
| N1—C2—C1 | 107.9 (5) | ||
| O1—C1—C2—N1 | 12.5 (8) | N1—C2—C3—C4 | 64.3 (7) |
| O2—C1—C2—N1 | −168.8 (5) | C1—C2—C3—C4 | −58.3 (7) |
| O1—C1—C2—C3 | 137.5 (6) | C2—C3—C4—O3 | −27.3 (8) |
| O2—C1—C2—C3 | −43.9 (7) | C2—C3—C4—N2 | 153.8 (6) |
| H··· | ||||
| O2—H1 | 0.88 (1) | 1.71 (3) | 2.549 (6) | 160 (9) |
| N1—H1 | 0.91 | 2.65 | 3.528 (7) | 164 |
| N1—H2 | 0.91 | 2.89 | 3.591 (8) | 135 |
| N1—H2 | 0.91 | 2.11 | 2.766 (8) | 129 |
| N1—H3 | 0.91 | 2.03 | 2.905 (6) | 160 |
| N2—H4 | 0.90 (1) | 3.07 (6) | 3.659 (5) | 125 (5) |
| N2—H4 | 0.90 (1) | 2.37 (4) | 3.171 (7) | 149 (6) |
| N2—H5 | 0.90 (1) | 2.12 (3) | 2.983 (9) | 160 (7) |
| O1 | 0.88 (1) | 2.68 (2) | 3.526 (8) | 164 (5) |
| O1 | 0.88 (1) | 2.76 (4) | 3.504 (7) | 143 (6) |