| Literature DB >> 30411535 |
Hao Cui1, Jizheng Wang2, Ce Zhang3, Guixin Wu3, Changsheng Zhu1, Bing Tang1, Yubao Zou3, Xiaohong Huang3, Rutai Hui2, Lei Song3, Shuiyun Wang1.
Abstract
BACKGROUND: Filamin C (FLNC) mutation was reported as a cause of HCM, with a high probability of sudden cardiac death. However, the mutation profile of FLNC, and its relationship with phenotypic expression in HCM, remains to be elucidated.Entities:
Keywords: FLNC mutation; hypertrophic cardiomyopathy; penetrance; prognosis
Mesh:
Substances:
Year: 2018 PMID: 30411535 PMCID: PMC6305649 DOI: 10.1002/mgg3.488
Source DB: PubMed Journal: Mol Genet Genomic Med ISSN: 2324-9269 Impact factor: 2.183
Figure 1FLNC mutations and their protein positions. Distributions of FLNC mutations identified in patients with hypertrophic cardiomyopathy (up) and healthy controls (down) were showed. Green color indicates benign mutations suggested by bioinformatics prediction. * indicates the mutations detected in both patients and controls
Detailed information of FLNC mutations identified in patients with hypertrophic cardiomyopathy and healthy controls
| Mutation | Amino acid alteration | HCM | Control | ESP | 1,000 genomes | ExAC | Protein domain | Polyphen−2 | SIFT | Mutation Taster | Human Splicing Finder |
|---|---|---|---|---|---|---|---|---|---|---|---|
| c.420C>G | His140Gln | 1 (1) | 0 | / | / | / | Actin‐binding | probably | affected | disease causing | N/A |
| c.433A>G | Met145Val | 1(1) | 0 | / | / | / | Actin‐binding | benign | affected | disease causing | N/A |
| c.547C>T | Arg183Cys | 1(1) | 0 | 0.08‰ | / | 0.03‰ | Actin‐binding | probably | affected | disease causing | N/A |
| c.824C>T | Pro275Leu | 1(1) | 0 | / | / | / | Filamin 1 | probably | affected | disease causing | N/A |
| c.896C>T | Thr299Ile | 1(1) | 0 | / | / | 0.01‰ | Filamin 1 | possibly | tolerated | disease causing | N/A |
| c.977 T>C | Val326Ala | 1 | 1 | / | 0.20‰ | 0.07‰ | Filamin 1 | benign | affected | disease causing | N/A |
| c.1076 T>C | Ile359Thr | 1 | 0 | / | / | / | Filamin 1 | probably | affected | disease causing | N/A |
| c.1132G>T | Val378Leu | 1 | 0 | / | / | / | Filamin 2 | probably | affected | disease causing | N/A |
| c.1406C>T | Ser469Leu | 0 | 1 | / | / | / | Filamin 3 | benign | affected | polymorphism | N/A |
| c.1616C>T | Pro539Leu | 0 | 1 | / | / | 0.02‰ | Filamin 3 | probably | affected | disease causing | N/A |
| c.1882G>A | Val628Met | 1 | 0 | / | / | / | Filamin 4 | probably | affected | disease causing | N/A |
| c.1910A>G | Glu637Gly | 2 | 1 | / | 0.20‰ | 0.03‰ | Filamin 4 | possibly | affected | disease causing | N/A |
| c.2050G>C | Val684Leu | 1 | 0 | / | / | 0.02‰ | Filamin 5 | benign | affected | disease causing | N/A |
| c.2170G>A | Gly724Ser | 1 | 0 | / | / | / | Filamin 5 | benign | tolerated | disease causing | N/A |
| c.2587C>T | Pro863Ser | 1 | 0 | / | / | 0.04‰ | Filamin 7 | possibly | affected | disease causing | N/A |
| c.2672C>T | Thr891Met | 1(1) | 0 | / | / | 0.03‰ | Filamin 7 | probably | affected | disease causing | N/A |
| c.2737G>A | Glu913Lys | 1 | 0 | / | / | 0.01‰ | Filamin 7 | benign | tolerated | disease causing | N/A |
| c.2839G>C | Gly947Arg | 1 (1) | 0 | / | / | 0.15‰ | Filamin 7 | probably | affected | disease causing | N/A |
| c.3145G>T, c.3146G>T | Gly1049Phe | 1 (1) | 1 | / | / | / | Filamin 8 | probably | affected | disease causing | N/A |
| c.3449G>A | Arg1150Gln | 1 | 1 | 0.08‰ | 0.60‰ | 0.07‰ | Filamin 10 | benign | tolerated | polymorphism | N/A |
| c.3530C>T | Thr1177Ile | 0 | 1 | / | / | / | Filamin 10 | possibly | tolerated | disease causing | N/A |
| c.3622G>A | Ala1208Thr | 0 | 1 | / | 0.40‰ | 0.02‰ | Filamin 10 | benign | tolerated | polymorphism | N/A |
| c.3623C>T | Ala1208Val | 1 | 0 | 0.15‰ | / | 0.12‰ | Filamin 10 | benign | tolerated | polymorphism | N/A |
| c.3706C>T | Pro1236Ser | 3 | 0 | / | / | 0.02‰ | Filamin 10 | probably | tolerated | disease causing | N/A |
| c.4364C>T | Ala1455Val | 0 | 1 | / | / | / | Filamin 13 | benign | tolerated | polymorphism | N/A |
| c.5125C>T | Pro1709Ser | 1 | 0 | / | / | / | Filamin 15 | benign | affected | disease causing | N/A |
| c.5132C>T | Pro1711Leu | 1 | 0 | / | / | 0.02‰ | Filamin 15 | probably | affected | disease causing | N/A |
| c.5278G>A | Gly1760Ser | 1 (1) | 0 | 0.08‰ | 0.4‰ | 0.33‰ | Filamin 16 | benign | tolerated | polymorphism | N/A |
| c.5332A>G | Met1778Val | 0 | 1 | / | / | / | Filamin 16 | benign | tolerated | polymorphism | N/A |
| c.5791C>T | Arg1931Cys | 0 | 1 | / | / | 0.05‰ | Filamin 17 | probably | affected | disease causing | N/A |
| c.5807A>C | His1936Pro | 1 (1) | 0 | / | / | / | Filamin 17 | probably | affected | disease causing | N/A |
| c.5888C>T | Thr1963Met | 1 | 0 | / | / | 0.02‰ | Filamin 18 | possibly | affected | disease causing | N/A |
| c.6296C>A | Thr2099Asn | 4 (1) | 1 | / | / | 0.01‰ | Filamin 19 | possibly | affected | disease causing | N/A |
| c.6397C>T | Arg2133Cys | 1 | 0 | / | / | / | Filamin 19 | probably | affected | disease causing | N/A |
| c.6419G>A | Arg2140Gln | 1 (1) | 0 | 0.08‰ | / | 0.02‰ | Filamin 19 | probably | affected | disease causing | N/A |
| c.6649C>T | Pro2217Ser | 1 (1) | 0 | / | / | / | Intradomain insert | benign | affected | disease causing | N/A |
| c.7030G>A | Ala2344Thr | 1 | 0 | / | 0.40‰ | 0.02‰ | Filamin 21 | probably | affected | disease causing | N/A |
| c.7186C>A | Pro2396Thr | 0 | 1 | / | / | / | Filamin 21 | probably | affected | disease causing | N/A |
| c.7514C>T | Pro2505Leu | 1 | 0 | / | / | / | Filamin 23 | possibly | affected | disease causing | N/A |
| c.850 + 4 T>G | Splicing | 1 | 0 | / | / | 0.02‰ | Filamin 1 | N/A | Benign | ||
| c.1048–3 T>G | Splicing | 0 | 1 | / | / | / | Filamin 1 | N/A | Damaging | ||
| c.2812–4A>G | Splicing | 1 | 0 | / | / | / | Filamin 7 | N/A | Damaging | ||
| c.7562–5C>T | Splicing | 2 | 1 | / | / | 0.12‰ | Filamin 23 | N/A | Benign | ||
/indicates not detected; numbers in brackets indicate patients harboring other causative mutation; N/A, not available. Reference sequence, NM_001458.4.
Detailed information of FLNC SNPs identified in patients with hypertrophic cardiomyopathy and healthy controls
| SNP | Amino acid alteration | HCM | Control | ESP | 1,000 genomes | ExAC | Protein domain | Polyphen−2 | SIFT | Mutation Taster | Human splicing Finder 3.0 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| c.2686G>A | Gly896Arg | 3 | 1 | / | 1‰ | 0.33‰ | Filamin 7 | probably | affected | disease causing |
|
| c.3079C>T | Arg1027Cys | 1 (1) | 0 | / | 4.9‰* | / | Filamin 8 | probably | affected | disease causing |
|
| c.5764G>A | Ala1922Thr | 5 (2) | 3 | 0.08‰ | 1.8‰ | 1.37% | Filamin 17 | benign | affected | disease causing |
|
| c.3790 + 5G>A | Splicing | 1 | 0 | 0.31‰ | 4.9‰* | 0.24‰ | Filamin 11 | N/A | Damaging | ||
SNP: single‐nucleotide polymorphism; / indicates not detected; * indicates frequency in Chinese population; numbers in brackets indicate patients harboring other causative mutation; N/A, Not Available. Reference sequence, NM_001458.4.
Figure 2Pedigree analysis of Arg2133Cys mutation. Closed symbols indicate members with HCM phenotypes; open symbols denote non‐HCM members. The proband is denoted by an arrow. Circles indicate women, and squares refer to men. Slashed symbols indicate deceased members. ±, carrier of heterozygous mutation; ‐/‐, wild‐type
Baseline characteristics of hypertrophic cardiomyopathy patients with and without FLNC mutations
| Parameters | Total ( | With mutations ( | Without mutations ( |
|
|---|---|---|---|---|
| Male (%) | 376 (69.6) | 23 (59.0) | 353 (70.5) | 0.149 |
| Age (years) | 50.1 ± 14.5 | 53.1 ± 16.9 | 49.8 ± 14.3 | 0.183 |
| Height (cm) | 166.8 ± 11.2 | 166.3 ± 8.2 | 166.8 ± 11.4 | 0.792 |
| Weight (Kg) | 71.4 ± 12.7 | 69.3 ± 9.8 | 71.6 ± 12.9 | 0.200 |
| Heart rate (beats per minute) | 72.4 ± 33.4 | 71.0 ± 12.2 | 72.5 ± 34.5 | 0.780 |
| Systolic pressure (mmHg) | 121.8 ± 17.8 | 122.9 ± 20.9 | 121.7 ± 17.6 | 0.673 |
| Diastolic pressure (mmHg) | 74.7 ± 10.8 | 74.4 ± 12.8 | 74.8 ± 10.6 | 0.862 |
| Onset age (years) | 42.9 ± 14.8 | 45.1 ± 16.9 | 42.8 ± 14.7 | 0.346 |
| NYHA heart function class | 1.66 ± 0.75 | 1.79 ± 0.74 | 1.65 ± 0.75 | 0.278 |
| LVEDD (mm) | 45.0 ± 6.7 | 43.9 ± 6.1 | 45.1 ± 6.7 | 0.303 |
| LVEF (%) | 66.2 ± 9.9 | 67.8 ± 8.1 | 66.0 ± 10.0 | 0.311 |
| Left atrium (mm) | 40.3 ± 6.9 | 38.3 ± 5.4 | 40.4 ± 7.1 | 0.084 |
| Right ventricle (mm) | 20.1 ± 3.6 | 20.1 ± 3.0 | 20.1 ± 3.6 | 0.970 |
| Septal thickness (mm) | 19.1 ± 5.9 | 20.7 ± 6.8 | 19.0 ± 5.8 | 0.080 |
| Posterior wall thickness (mm) | 11.8 ± 3.4 | 11.2 ± 2.6 | 11.8 ± 3.5 | 0.293 |
| LVOT obstruction (%) | 191 (35.4) | 10 (25.6) | 181 (36.1) | 0.225 |
| Family history (%) | 135 (25.0) | 9 (23.1) | 126 (25.1) | 0.850 |
| Familial history of SCD (%) | 80 (14.8) | 6 (15.4) | 74 (14.8) | 0.819 |
| Beta blocker | 463 (85.7) | 31 (79.5) | 432 (86.2) | <0.001 |
| Calcium channel blocker | 259 (48.0) | 29 (74.4) | 230 (45.9) | <0.001 |
| Prior or future SRT | 98 (18.1) | 5 (12.8) | 93 (18.6) | <0.001 |
NYHA: New York Heart Association; LVEDD: left ventricular end‐diastolic diameter; LVEF: left ventricular eject fraction; LVOT: left ventricular outflow tract; SCD: sudden cardiac death; SRT: septal reduction therapy.
Died patients with FLNC mutations
| No. | Cause of death | Gender | Age at death | FLNC mutation | Concomitant mutation | NYHA class | Family history of SCD |
|---|---|---|---|---|---|---|---|
| 1 | HF | F | 84 | c.2812–4A>G | No | 2 | No |
| 2 | HF | F | 83 | p.Arg2140Gln | MYBPC3 | 4 | No |
| 3 | SCD | M | 64 | p.Pro2217Ser | MYBPC3 | 1 | Yes |
| 4 | HF | F | 21 | p.Thr2099Asn | No | 3 | No |
SCD: sudden cardiac death; HF: heart failure; F: female; M: male; NYHA, New York Heart Association
Figure 3Survival curves in hypertrophic cardiomyopathy patients with and without FLNC mutations. p‐values were calculated using the log‐rank test. FLNC mutations did not increase the risk for either all‐cause mortality (a) or cardiac mortality (b); there was no significant difference in survival, free from sudden cardiac arrest (c) and heart failure (d), between HCM patients, with and without FLNC mutations