| Literature DB >> 30352977 |
Li-Han Lin1, Kuo-Wei Chang2, Shou-Yen Kao3, Hui-Wen Cheng4, Chung-Ji Liu5.
Abstract
BACKGROUND: Oral squamous cell carcinoma (OSCC) is a disease that affects patients worldwide. DNA of dead cells is released into the blood stream and may be isolated from plasma or serum samples. This DNA is termed cell-free DNA (cfDNA). cfDNA is increased in several types of malignancies. We investigated if there was a correlation between cfDNA levels and the progression of OSCC.Entities:
Keywords: cell free DNA; marker; mouth neoplasm; plasma; survival
Mesh:
Substances:
Year: 2018 PMID: 30352977 PMCID: PMC6274798 DOI: 10.3390/ijms19113303
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Figure 1Agilent TapeStation analysis for the DNA integrity of oral squamous cell carcinoma (OSCC) samples and healthy donors.
Clinical parameter and cfDNA content in OSCC patients.
| OSCC | Control | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| Variables | N | Mean | ±SEM | Pa | Pb | N | Mean | ±SEM | Pa |
| Age (years) | |||||||||
| <58 | 56 | 43.25 | ±6.31 | 0.385 | 24 | 27.88 | ±5.51 | 0.938 | |
| ≥58 | 65 | 61.24 | ±11.03 | 26 | 20.35 | ±3.88 | |||
| Gender | |||||||||
| Male | 113 | 53.90 | ±7.10 | 0.851 | 43 | 22.64 | ±3.35 | 0.935 | |
| Female | 8 | 41.25 | ±13.71 | 7 | 32.04 | ±12.36 | |||
| Tumor size | |||||||||
| T1–T2 | 48 | 33.24 | ±4.24 | 0.024 * | |||||
| T3–T4 | 73 | 66.09 | ±10.49 | ||||||
| Nodal stage | |||||||||
| N0 | 84 | 43.73 | ±5.59 | 0.009 * | |||||
| N+ | 37 | 74.25 | ±17.52 | ||||||
| Stage | |||||||||
| I–II | 40 | 27.95 | ±4.30 | 0.001 * | |||||
| III–IV | 81 | 65.46 | ±9.49 | ||||||
| Histological grade | |||||||||
| Well | 88 | 50.96 | ±5.32 | 0.268 | |||||
| Moderate | 25 | 69.87 | ±26.53 | ||||||
| Poor | 8 | 23.61 | ±6.30 | ||||||
| Perineural invasion | |||||||||
| No | 84 | 51.72 | ±8.92 | 0.269 | |||||
| Yes | 37 | 56.11 | ±8.48 | ||||||
| Lymphovascular invasion | |||||||||
| No | 101 | 45.08 | ±4.96 | 0.028 * | |||||
| Yes | 20 | 93.39 | ±30.92 | ||||||
Pa, p-value by Mann-Whitney U test; Pb, p-value by Kruskal-Wallis test. * Statistically significant (p < 0.05).
Figure 2Comparison of cell free DNA (cfDNA) plasma levels. Scatter dot plots with mean ± SD computed by Mann–Whitney test: (A) Healthy controls vs. preoperative plasma cfDNA levels in patients with OSCC. (B) pre-operative plasma cfDNA levels and different tumor sizes (C), Absence or presence of neck lymph node metastasis. (D) early and late stage carcinoma and (E) lymphovascular invasion status. (F) pre-operative and post-operative plasma samples.
Figure 3Receiver operating characteristic (ROC) and leave-one-out cross-validation (LOOCV) analysis across control and pre-operative samples (A) lymph node metastasis status (B) and disease specific survival samples (C). Plasma cfDNA Kaplan–Meier analysis of disease specific survival for OSCC patients. Higher plasma cfDNA concentrations demonstrated a poor prognosis in OSCC. (D). Plasma cfDNA Kaplan–Meier analysis of disease free survival for OSCC patients. Higher plasma cfDNA concentrations demonstrated more relapsed in OSCC.
Association between cfDNA content and OSCC risk.
| Variables | Cases (%) | Controls (%) | Crude OR (95% CI) |
| Adjusted a OR (95% CI) |
| ||
|---|---|---|---|---|---|---|---|---|
| cfDNA (ng/mL) | ||||||||
| <20.15 | 43 | (35.5%) | 35 | (70.0%) | Reference | Reference | ||
| ≥20.15 | 78 | (64.5%) | 15 | (30.0%) | 4.233 (2.080–8.611) | <0.001 * | 4.153 (2.155–9.204) | <0.001 * |
a Odds ratios were adjusted for age and sex OR, Odds ratio; CI, confidence interval, * p < 0.05.
Univariate and multivariate analysis of risk factors for lymph node metastasis.
| Variables | Subgroups | Odd Ratio (95% CI) |
|
|---|---|---|---|
| Univariate analysis | |||
| Age (years) | ≥58 vs. <58 | 0.746 (0.343–1.619) | 0.458 |
| Gender | Female vs. Male | 1.394 (0.315–6.166) | 0.661 |
| Tumor size | T3–T4 vs. T1–T2 | 3.295 (1.350–8.042) | 0.009 * |
| Perineural invasion | Yes vs. No | 2.720 (0.889–6.373) | 0.017 * |
| Lymphovascular invasion | Yes vs. No | 5.958 (2.134–16.636) | 0.001 * |
| cfDNA (ng/mL) | ≥41.94 vs. <41.94 | 3.481 (1.551–7.810) | 0.002 * |
| Multivariate analysis | |||
| Tumor size | T3–T4 vs. T1–T2 | 2.059 (0.783–5.412) | 0.143 |
| Perineural invasion | Yes vs. No | 1.537 (0.581–4.066) | 0.387 |
| Lymphovascular invasion | Yes vs. No | 3.424 (1.065–11.010) | 0.039 * |
| cfDNA (ng/mL) | ≥41.94 vs. <41.94 | 2.533 (1.055–6.084) | 0.038 * |
CI, confidence interval. * p < 0.05.
Univariate and multivariate Cox regression analysis of disease specific survival in OSCC.
| Variables | Subgroups | Hazard Ratio (95%CI) |
|
|---|---|---|---|
| Univariate analysis | |||
| Age (years) | ≥58 vs. <58 | 1.438 (0.509–4.060) | 0.493 |
| Gender | Female vs. Male | 1.073 (0.141–8.165) | 0.946 |
| Tumor size | T3–T4 vs. T1–T2 | 4.474 (1.008–19.850) | 0.049 * |
| Nodal stage | N+ vs. N0 | 15.992 (3.601–71.030) | <0.001 * |
| Perineural invasion | Yes vs. No | 4.871 (1.663–14.268) | 0.004 * |
| Lymphovascular invasion | Yes vs. No | 6.690 (2.365–18.926) | <0.001 * |
| cfDNA (ng/mL) | ≥41.94 vs. <41.94 | 6.637 (1.859–23.702) | 0.004 * |
| Multivariate analysis | |||
| Tumor size | T3–T4 vs. T1–T2 | 2.937 (0.640–13.472) | 0.166 |
| Nodal stage | N+ vs. N0 | 9.529 (2.054–44.195) | 0.004 * |
| Perineural invasion | Yes vs. No | 2.747 (0.877–8.602) | 0.083 |
| Lymphovascular invasion | Yes vs. No | 1.886 (0.625–5.685) | 0.260 |
| cfDNA (ng/mL) | ≥41.94 vs. <41.94 | 4.432 (1.214–16.178) | 0.024 * |
CI, confidence interval. * p < 0.05.