Literature DB >> 30347123

Mechanisms of HNO Reactions with Ferric Heme Proteins.

Yelu Shi1, Yong Zhang1.   

Abstract

Many HNO-scavenging pathways exist to regulate its biological and pharmacological activities. Such reactions often involve ferric heme proteins and form an important basis for HNO probe development. However, mechanisms of HNO reactions with ferric heme proteins are largely unknown. We performed a computational investigation using metmyoglobin and catalase as representative ferric heme proteins with neutral and negatively charged axial ligands to provide the first detailed pathways. The results reproduced experimental barriers well with an average error of 0.11 kcal mol-1 . The rate-limiting step was found to be dissociation of the resting ligand or HNO coordination when there is no resting ligand. For both heme proteins, in contrast to the non-heme case, the reductive nitrosylation step was found to be barrierless proton-coupled electron transfer, which provides the major thermodynamic driving force for the overall reaction. The origin of the difference in reactivity between metmyoglobin and catalase was also revealed.
© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  bioinorganic chemistry; computational chemistry; heme proteins; nitrogen oxides; reaction mechanisms

Mesh:

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Year:  2018        PMID: 30347123      PMCID: PMC6522253          DOI: 10.1002/anie.201807699

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  39 in total

Review 1.  The physiological chemistry and biological activity of nitroxyl (HNO): the neglected, misunderstood, and enigmatic nitrogen oxide.

Authors:  Jon M Fukuto; Michael D Bartberger; Andrew S Dutton; Nazareno Paolocci; David A Wink; K N Houk
Journal:  Chem Res Toxicol       Date:  2005-05       Impact factor: 3.739

Review 2.  Coordination chemistry of the HNO ligand with hemes and synthetic coordination complexes.

Authors:  Patrick J Farmer; Filip Sulc
Journal:  J Inorg Biochem       Date:  2005-01       Impact factor: 4.155

3.  Horseradish peroxidase catalyzed nitric oxide formation from hydroxyurea.

Authors:  Jinming Huang; Erin M Sommers; Daniel B Kim-Shapiro; S Bruce King
Journal:  J Am Chem Soc       Date:  2002-04-03       Impact factor: 15.419

4.  Bonding in HNO-myoglobin as characterized by X-ray absorption and resonance raman spectroscopies.

Authors:  Chad E Immoos; Filip Sulc; Patrick J Farmer; Kazimierz Czarnecki; David F Bocian; Aviva Levina; Jade B Aitken; Robert S Armstrong; Peter A Lay
Journal:  J Am Chem Soc       Date:  2005-01-26       Impact factor: 15.419

Review 5.  Reactions of HNO with metal porphyrins: underscoring the biological relevance of HNO.

Authors:  Fabio Doctorovich; Damian E Bikiel; Juan Pellegrino; Sebastián A Suárez; Marcelo A Martí
Journal:  Acc Chem Res       Date:  2014-09-19       Impact factor: 22.384

6.  Over or under: hydride attack at the metal versus the coordinated nitrosyl ligand in ferric nitrosyl porphyrins.

Authors:  E G Abucayon; R L Khade; D R Powell; M J Shaw; Y Zhang; G B Richter-Addo
Journal:  Dalton Trans       Date:  2016-11-15       Impact factor: 4.390

7.  Interaction of Angeli's salt with cytochrome P450 1A2 distal mutants: an optical absorption spectral study.

Authors:  Y Shibata; H Sato; I Sagami; T Shimizu
Journal:  Biochim Biophys Acta       Date:  1997-11-14

8.  The molecular mechanism of the catalase reaction.

Authors:  Mercedes Alfonso-Prieto; Xevi Biarnés; Pietro Vidossich; Carme Rovira
Journal:  J Am Chem Soc       Date:  2009-08-26       Impact factor: 15.419

9.  Nitrosyl hydride (HNO) as an O2 analogue: long-lived HNO adducts of ferrous globins.

Authors:  Murugaeson R Kumar; Dmitry Pervitsky; Lan Chen; Thomas Poulos; Suman Kundu; Mark S Hargrove; Eladio J Rivera; Agustin Diaz; Jorge L Colón; Patrick J Farmer
Journal:  Biochemistry       Date:  2009-06-09       Impact factor: 3.162

10.  HNO binding in a heme protein: structures, spectroscopic properties, and stabilities.

Authors:  Liu Yang; Yan Ling; Yong Zhang
Journal:  J Am Chem Soc       Date:  2011-08-17       Impact factor: 15.419

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  2 in total

1.  Insight into the preferential N-binding versus O-binding of nitrosoarenes to ferrous and ferric heme centers.

Authors:  Erwin G Abucayon; Jia-Min Chu; Megan Ayala; Rahul L Khade; Yong Zhang; George B Richter-Addo
Journal:  Dalton Trans       Date:  2021-03-16       Impact factor: 4.390

2.  HNO to NO Conversion Mechanism with Copper Zinc Superoxide Dismutase, Comparison with Heme Protein Mediated Conversions, and the Origin of Questionable Reversibility.

Authors:  Yelu Shi; Matthew A Michael; Yong Zhang
Journal:  Chemistry       Date:  2021-02-16       Impact factor: 5.236

  2 in total

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