Literature DB >> 30305279

Structure and dynamics of the platelet integrin-binding C4 domain of von Willebrand factor.

Emma-Ruoqi Xu1, Sören von Bülow2, Po-Chia Chen2, Peter J Lenting3, Katra Kolšek4, Camilo Aponte-Santamaría4,5,6, Bernd Simon2, Jaelle Foot2, Tobias Obser7, Reinhard Schneppenheim7, Frauke Gräter4, Cécile V Denis3, Matthias Wilmanns1,8, Janosch Hennig2.   

Abstract

Von Willebrand factor (VWF) is a key player in the regulation of hemostasis by promoting recruitment of platelets to sites of vascular injury. An array of 6 C domains forms the dimeric C-terminal VWF stem. Upon shear force activation, the stem adopts an open conformation allowing the adhesion of VWF to platelets and the vessel wall. To understand the underlying molecular mechanism and associated functional perturbations in disease-related variants, knowledge of high-resolution structures and dynamics of C domains is of paramount interest. Here, we present the solution structure of the VWF C4 domain, which binds to the platelet integrin and is therefore crucial for the VWF function. In the structure, we observed 5 intra- and inter-subdomain disulfide bridges, of which 1 is unique in the C4 domain. The structure further revealed an unusually hinged 2-subdomain arrangement. The hinge is confined to a very short segment around V2547 connecting the 2 subdomains. Together with 2 nearby inter-subdomain disulfide bridges, this hinge induces slow conformational changes and positional alternations of both subdomains with respect to each other. Furthermore, the structure demonstrates that a clinical gain-of-function VWF variant (Y2561) is more likely to have an effect on the arrangement of the C4 domain with neighboring domains rather than impairing platelet integrin binding.
© 2019 by The American Society of Hematology.

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Year:  2018        PMID: 30305279      PMCID: PMC6450055          DOI: 10.1182/blood-2018-04-843615

Source DB:  PubMed          Journal:  Blood        ISSN: 0006-4971            Impact factor:   22.113


  48 in total

1.  Slow dynamics in folded and unfolded states of an SH3 domain.

Authors:  M Tollinger; N R Skrynnikov; F A Mulder; J D Forman-Kay; L E Kay
Journal:  J Am Chem Soc       Date:  2001-11-21       Impact factor: 15.419

2.  The DynDom database of protein domain motions.

Authors:  Richard A Lee; Moe Razaz; Steven Hayward
Journal:  Bioinformatics       Date:  2003-07-01       Impact factor: 6.937

3.  Force sensing by the vascular protein von Willebrand factor is tuned by a strong intermonomer interaction.

Authors:  Jochen P Müller; Salomé Mielke; Achim Löf; Tobias Obser; Christof Beer; Linda K Bruetzel; Diana A Pippig; Willem Vanderlinden; Jan Lipfert; Reinhard Schneppenheim; Martin Benoit
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-19       Impact factor: 11.205

4.  How robust are protein folding simulations with respect to force field parameterization?

Authors:  Stefano Piana; Kresten Lindorff-Larsen; David E Shaw
Journal:  Biophys J       Date:  2011-05-04       Impact factor: 4.033

5.  T7 vectors with modified T7lac promoter for expression of proteins in Escherichia coli.

Authors:  J Peränen; M Rikkonen; M Hyvönen; L Kääriäinen
Journal:  Anal Biochem       Date:  1996-05-01       Impact factor: 3.365

6.  A pH-regulated dimeric bouquet in the structure of von Willebrand factor.

Authors:  Yan-Feng Zhou; Edward T Eng; Noritaka Nishida; Chafen Lu; Thomas Walz; Timothy A Springer
Journal:  EMBO J       Date:  2011-08-19       Impact factor: 11.598

7.  Structural analyses of von Willebrand factor C domains of collagen 2A and CCN3 reveal an alternative mode of binding to bone morphogenetic protein-2.

Authors:  Emma-Ruoqi Xu; Emily E Blythe; Gerhard Fischer; Marko Hyvönen
Journal:  J Biol Chem       Date:  2017-06-05       Impact factor: 5.157

Review 8.  von Willebrand factor and von Willebrand disease.

Authors:  Z M Ruggeri; T S Zimmerman
Journal:  Blood       Date:  1987-10       Impact factor: 22.113

9.  Structural specializations of A2, a force-sensing domain in the ultralarge vascular protein von Willebrand factor.

Authors:  Qing Zhang; Yan-Feng Zhou; Cheng-Zhong Zhang; Xiaohui Zhang; Chafen Lu; Timothy A Springer
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-21       Impact factor: 11.205

Review 10.  Biochemistry and genetics of von Willebrand factor.

Authors:  J E Sadler
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

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  6 in total

1.  The C-terminal dimerization domain of the respiratory mucin MUC5B functions in mucin stability and intracellular packaging before secretion.

Authors:  Caroline Ridley; Michael P Lockhart-Cairns; Richard F Collins; Thomas A Jowitt; Durai B Subramani; Mehmet Kesimer; Clair Baldock; David J Thornton
Journal:  J Biol Chem       Date:  2019-09-30       Impact factor: 5.157

2.  Multifaceted pathomolecular mechanism of a VWF large deletion involved in the pathogenesis of severe VWD.

Authors:  Hamideh Yadegari; Muhammad Ahmer Jamil; Jens Müller; Natascha Marquardt; Orla Rawley; Ulrich Budde; Osman El-Maarri; David Lillicrap; Johannes Oldenburg
Journal:  Blood Adv       Date:  2022-02-08

3.  Genetic and Clinical Predictors of Left Atrial Thrombus: A Single Center Case-Control Study.

Authors:  Adrian Springer; Ruben Schleberger; Florian Oyen; Boris A Hoffmann; Stephan Willems; Christian Meyer; Florian Langer; Renate B Schnabel; Paulus Kirchhof; Reinhard Schneppenheim; Marc D Lemoine
Journal:  Clin Appl Thromb Hemost       Date:  2021 Jan-Dec       Impact factor: 2.389

4.  The von Willebrand factor Tyr2561 allele is a gain-of-function variant and a risk factor for early myocardial infarction.

Authors:  Reinhard Schneppenheim; Natalie Hellermann; Maria A Brehm; Ulrike Klemm; Tobias Obser; Volker Huck; Stefan W Schneider; Cécile V Denis; Alexander Tischer; Matthew Auton; Winfried März; Emma-Ruoqi Xu; Matthias Wilmanns; Rainer B Zotz
Journal:  Blood       Date:  2018-10-26       Impact factor: 25.476

Review 5.  Imaging Platelet Processes and Function-Current and Emerging Approaches for Imaging in vitro and in vivo.

Authors:  Samantha J Montague; Yean J Lim; Woei M Lee; Elizabeth E Gardiner
Journal:  Front Immunol       Date:  2020-01-31       Impact factor: 7.561

6.  Gain-of-Function Variant p.Pro2555Arg of von Willebrand Factor Increases Aggregate Size through Altering Stem Dynamics.

Authors:  Volker Huck; Po-Chia Chen; Emma-Ruoqi Xu; Alexander Tischer; Ulrike Klemm; Camilo Aponte-Santamaría; Christian Mess; Tobias Obser; Fabian Kutzki; Gesa König; Cécile V Denis; Frauke Gräter; Matthias Wilmanns; Matthew Auton; Stefan W Schneider; Reinhard Schneppenheim; Janosch Hennig; Maria A Brehm
Journal:  Thromb Haemost       Date:  2021-04-14       Impact factor: 6.681

  6 in total

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