Literature DB >> 30297206

tsRNAs: The Swiss Army Knife for Translational Regulation.

Junchao Shi1, Yunfang Zhang2, Tong Zhou3, Qi Chen4.   

Abstract

tRNA-derived small RNAs (tsRNAs, or tRFs) are a new category of regulatory noncoding RNAs with versatile functions. Recent emerging studies have begun to unveil distinct features of tsRNAs based on their sequence, RNA modifications, and structures that differentially impact their functions towards regulating multiple aspects of translational control and ribosome biogenesis.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  RNA modification; RNA structure; ribosome; tRNA-derived small RNA; translational regulation

Mesh:

Substances:

Year:  2018        PMID: 30297206      PMCID: PMC6379142          DOI: 10.1016/j.tibs.2018.09.007

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  24 in total

1.  Serum mitochondrial tsRNA serves as a novel biomarker for hepatocarcinoma diagnosis.

Authors:  Shoubin Zhan; Ping Yang; Shengkai Zhou; Ye Xu; Rui Xu; Gaoli Liang; Chenyu Zhang; Xi Chen; Liuqing Yang; Fangfang Jin; Yanbo Wang
Journal:  Front Med       Date:  2022-04-13       Impact factor: 4.592

2.  A 5' tRNA-Ala-derived small RNA regulates anti-fungal defense in plants.

Authors:  Hanqing Gu; Bi Lian; Yuxiang Yuan; Ci Kong; Yan Li; Chang Liu; Yijun Qi
Journal:  Sci China Life Sci       Date:  2021-10-22       Impact factor: 6.038

3.  Alterations of RNA Modification in Mouse Germ Cell-2 Spermatids Under Hypoxic Stress.

Authors:  Tong He; Huanping Guo; Lin Xia; Xipeng Shen; Yun Huang; Xiao Wu; Xuelin Jiang; Yinying Xu; Yi Tan; Yunfang Zhang; Dongmei Tan
Journal:  Front Mol Biosci       Date:  2022-06-14

4.  Small RNA modifications in Alzheimer's disease.

Authors:  Xudong Zhang; Fatima Trebak; Lucas A C Souza; Junchao Shi; Tong Zhou; Patrick G Kehoe; Qi Chen; Yumei Feng Earley
Journal:  Neurobiol Dis       Date:  2020-08-21       Impact factor: 5.996

Review 5.  Regulation and Function of RNA Pseudouridylation in Human Cells.

Authors:  Erin K Borchardt; Nicole M Martinez; Wendy V Gilbert
Journal:  Annu Rev Genet       Date:  2020-09-01       Impact factor: 16.830

Review 6.  Sperm RNA code programmes the metabolic health of offspring.

Authors:  Yunfang Zhang; Junchao Shi; Minoo Rassoulzadegan; Francesca Tuorto; Qi Chen
Journal:  Nat Rev Endocrinol       Date:  2019-06-24       Impact factor: 43.330

7.  PANDORA-seq expands the repertoire of regulatory small RNAs by overcoming RNA modifications.

Authors:  Junchao Shi; Yunfang Zhang; Dongmei Tan; Xudong Zhang; Menghong Yan; Ying Zhang; Reuben Franklin; Marta Shahbazi; Kirsty Mackinlay; Shichao Liu; Bernhard Kuhle; Emma R James; Liwen Zhang; Yongcun Qu; Qiwei Zhai; Wenxin Zhao; Linlin Zhao; Changcheng Zhou; Weifeng Gu; Jernej Murn; Jingtao Guo; Douglas T Carrell; Yinsheng Wang; Xuemei Chen; Bradley R Cairns; Xiang-Lei Yang; Paul Schimmel; Magdalena Zernicka-Goetz; Sihem Cheloufi; Ying Zhang; Tong Zhou; Qi Chen
Journal:  Nat Cell Biol       Date:  2021-04-05       Impact factor: 28.824

Review 8.  Origins and evolving functionalities of tRNA-derived small RNAs.

Authors:  Qi Chen; Xudong Zhang; Junchao Shi; Menghong Yan; Tong Zhou
Journal:  Trends Biochem Sci       Date:  2021-05-27       Impact factor: 14.264

9.  NRF2 loss recapitulates heritable impacts of paternal cigarette smoke exposure.

Authors:  Patrick J Murphy; Jingtao Guo; Timothy G Jenkins; Emma R James; John R Hoidal; Thomas Huecksteadt; Dallin S Broberg; James M Hotaling; David F Alonso; Douglas T Carrell; Bradley R Cairns; Kenneth I Aston
Journal:  PLoS Genet       Date:  2020-06-10       Impact factor: 5.917

10.  Extensive profiling of the expressions of tRNAs and tRNA-derived fragments (tRFs) reveals the complexities of tRNA and tRF populations in plants.

Authors:  Xuan Ma; Chunyan Liu; Xiaocong Kong; Jing Liu; Siju Zhang; Shanshan Liang; Weijiang Luan; Xiaofeng Cao
Journal:  Sci China Life Sci       Date:  2021-02-08       Impact factor: 6.038

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