| Literature DB >> 30291286 |
Ayesha Khalid1, Amna Jabbar Siddiqui1, Jian-Hua Huang2, Tahir Shamsi3, Syed Ghulam Musharraf4,5.
Abstract
Acute Leukaemia (AL) is a neoplasm of WBCs (white blood cells). Being an important class of metabolites, alteration in free fatty acids (FFAs) levels play a key role in cancer development and progression. As they involve in cell signaling, maintain membrane integrity, regulate homeostasis and effect cell and tissue functions. Considering this fact, a comprehensive analysis of FFAs was conducted to monitor their alteration in AL, pre-leukaemic diseases and healthy control. Fifteen FFAs were analyzed in 179 serum samples of myelodysplastic syndrome (MDS), aplastic anemia (APA), acute lymphoblastic leukaemia (ALL), acute myeloid leukaemia (AML) and healthy control using gas chromatography-multiple reaction monitoring-mass spectrometry (GC-MRM-MS). A multivariate statistical method of random forest (RF) was employed for chemometric analysis. Serum level of two FFAs including C18:0 and C14:0 were found discriminative among all five groups, and between ALL and AML, respectively. Moreover, C14:0 was identified as differentiated FFAs for systematic progression of pre-leukaemic conditions towards AML. C16:0 came as discriminated FFAs between APA and MDS/AML. Over all it was identified that FFAs profile not only become altered in leukaemia but also in pre-leukaemic diseases.Entities:
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Year: 2018 PMID: 30291286 PMCID: PMC6173776 DOI: 10.1038/s41598-018-33224-1
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Optimized GC-MS/MS acquisition method parameters and the list of precursor ions and product ions of each FAME.
| FAMEs | Precursor Ion (m/z) | Optimized collision energy (eV) | MRM transitions (m/z) | |
|---|---|---|---|---|
| Identification (q) | Quantification (Q) | |||
| C-8:0 | 158.2 | 30 | 41, 45, 55 | 158.2 → 73.0 |
| C-10:0 | 186.2 | 15 | 59, 73, 115 | 186.2 → 101.0 |
| C-12:0 | 214.3 | 15 | 69, 73, 83 | 214.3 → 101.0 |
| C-14:0 | 242.4 | 15 | 69, 143, 157 | 242.4 → 101.0 |
| C-14:1 Δcis−9 | 208.0 | 10 | 84, 111, 137 | 208.0 → 97.0 |
| C-16:0 | 270.4 | 10 | 171, 185, 199 | 270.4 → 101.0 |
| C-16:1 Δcis−9 | 236.0 | 10 | 84, 111, 137 | 236.0 → 97.0 |
| C-18:0 | 298.5 | 15 | 69, 143, 199 | 298.5 → 101.0 |
| C-18:1 Δcis−9 | 296.4 | 20 | 81, 95, 101 | 296.4 → 101.0 |
| C-18:1 Δcis−11 | 296.4 | 10 | 127, 155, 213 | 296.4 → 141.0 |
| C-20:1 Δcis−11 | 292.0 | 10 | 111, 137, 249 | 292.0 → 98.0 |
| C-22:0 | 354.6 | 10 | 101, 199, 213 | 354.6 → 101.0 |
| C-22:1 Δcis−13 | 320.0 | 10 | 111, 263, 277 | 320.0 → 98.0 |
| C-24:0 | 382.6 | 10 | 157, 213, 227 | 382.6 → 101.0 |
| C-24:1 Δcis−15 | 348.0 | 10 | 69, 97, 123 | 348.0 → 97.0 |
Retention time, correlation coefficients, regression equation, limits of detection and limit of quantification of individual FAMEs.
| FAMEs | Retention time (min) | Correlation coefficient (r2) | Regression equation | LOD (mg mL−1) | LOQ (mg mL−1) |
|---|---|---|---|---|---|
| C-8:0 | 11.906 ± 0.003 | 0.9700 | y = 5734.40* × −3456.13 | 0.2290 | 0.6939 |
| C-10:0 | 15.959 ± 0.002 | 0.9804 | y = 44689.78* × −26572.41 | 0.2375 | 0.7198 |
| C-12:0 | 19.566 ± 0.003 | 0.9757 | y = 13344.42* × −78077.45 | 0.2476 | 0.7504 |
| C-14:0 | 22.806 ± 0.007 | 0.9839 | y = 252579.39* × −162940.73 | 0.2272 | 0.6885 |
| C-14:1 Δcis−9 | 22.626 ± 0.005 | 0.9824 | y = 186207.96* × −120464.25 | 0.2527 | 0.7658 |
| C-16:0 | 25.743 ± 0.009 | 0.9865 | y = 157066.81* × −103189.90 | 0.2308 | 0.6993 |
| C-16:1 Δcis−9 | 25.466 ± 0.007 | 0.9871 | y = 114942.54* × −74618.51 | 0.2304 | 0.6983 |
| C-18:0 | 30.590 ± 0.005 | 0.9837 | y = 263816.71* × −152409.85 | 0.2440 | 0.7024 |
| C-18:1 Δcis−9 | 28.110 ± 0.009 | 0.9826 | y = 533.64* × −318.89 | 0.2551 | 0.7732 |
| C-18:1 Δcis−11 | 28.176 ± 0.009 | 0.9581 | y = 14400.43* × −8854.33 | 0.2423 | 0.7344 |
| C-20:1 Δcis−11 | 32.590 ± 0.005 | 0.9807 | y = 63310.813* × −39123.02 | 0.1962 | 0.5948 |
| C-22:0 | 33.90 ± 0.02 | 0.9834 | y = 176081.82* × −114211.45 | 0.2628 | 0.7965 |
| C-22:1 Δcis−13 | 33.46 ± 0.01 | 0.9910 | y = 66450.90* × −44433.49 | 0.1807 | 0.5476 |
| C-24:0 | 38.53 ± 0.05 | 0.9766 | y = 150162.93* × −103479.79 | 0.1577 | 0.4781 |
| C-24:1 Δcis−15 | 37.82 ± 0.02 | 0.9789 | y = 34888.70* × −20911.09 | 0.2333 | 0.6999 |
FFAs composition of the HC, ALL, AML, APA and MDS samples.
| FFAs (mg mL−1) | HC (n = 30) | ALL (n = 24) | AML (n = 62) | APA (n = 46) | MDS (n = 17) |
|---|---|---|---|---|---|
| C-8:0 | 0.699 ± 0.005 | 0.699 ± 0.003 | 0.702 ± 0.003 | 0.701 ± 0.002 | 0.701 ± 0.001 |
| C-10:0 | 0.72 ± 0.03 | 0.724 ± 0.005 | 0.725 ± 0.005 | 0.721 ± 0.006 | 0.720 ± 0.003 |
| C-12:0 | 0.758 ± 0.004 | 0.761 ± 0.005 | 0.76 ± 0.02 | 0.76 ± 0.02 | 0.75 ± 0.02 |
| C-14:0 | 1.0 ± 0.2 | 0.80 ± 0.09 | 0.72 ± 0.04 | 0.8 ± 0.1 | 0.78 ± 0.06 |
| C-14:1 Δcis−9 | 0.77 ± 0.03 | 0.77 ± 0.01 | 0.77 ± 0.03 | 0.76 ± 0.03 | 0.77 ± 0.02 |
| C-16:0 | 0.76 ± 0.06 | 0.8 ± 0.2 | 0.82 ± 0.07 | 0.8 ± 0.2 | 0.80 ± 0.04 |
| C-16:1 Δcis-9 | *BQL | 0.70 ± 0.05 | *BQL | *BQL | *BQL |
| C-18:0 | 1.1 ± 0.4 | 0.78 ± 0.08 | 0.78 ± 0.07 | 0.81 ± 0.05 | 0.81 ± 0.06 |
| C-18:1 Δcis−9 | 0.77 ± 0.08 | 0.78 ± 0.1 | 0.8 ± 0.1 | 0.77 ± 0.07 | 0.78 ± 0.09 |
| C-18:1 Δcis−11 | 0.73 ± 0.07 | 0.74 ± 0.07 | 0.74 ± 0.09 | 0.74 ± 0.07 | 0.74 ± 0.06 |
| C-20:1 Δcis−11 | 0.65 ± 0.04 | 0.62 ± 0.04 | 0.62 ± 0.05 | 0.62 ± 0.05 | 0.61 ± 0.03 |
| C-22:0 | *BQL | *BQL | *BQL | *BQL | *BQL |
| C-22:1 Δcis−13 | 0.675 ± 0.004 | 0.680 ± 0.008 | 0.672 ± 0.006 | 0.670 ± 0.007 | 0.6692 ± 0.0009 |
| C-24:0 | 0.69 ± 0.04 | 0.69 ± 0.03 | 0.68 ± 0.04 | 0.68 ± 0.07 | 0.68 ± 0.02 |
| C-24:1 Δcis−15 | 0.7 ± 0.1 | 0.70 ± 0.07 | 0.70 ± 0.07 | 0.70 ± 0.07 | 0.70 ± 0.07 |
*Below Quantification Limit.
Figure 1Serum FFAs profiles from healthy controls, ALL, AML, APA and MDS groups (a) Multi-dimension scaling plot (b) VIP plot obtained by RF model (*C-18:1Δcis−9).
Figure 2Serum FFAs profiles from ALL, AML groups (a) Multi-dimension scaling plot (b) VIP plot obtained by RF model (*C-18:1Δcis−9).
Figure 3Serum FFAs profiles from ALL, APA, AML and MDS (a) Multi dimension scaling plot (b) VIP obtained by RF models (*C-18:1Δcis−9).
Figure 4Serum FFAs profiles from APA and AML/MDS (a) Multi dimension scaling plot (b) VIP obtained by RF models (*C-18:1Δcis−9).
Figure 5Mean concentration plot of C-14:0 in AL in comparison with pre-leukaemic diseases and healthy control.