| Literature DB >> 30272195 |
Rolf Hirsch1, Jochen Wiesner1, Alexander Marker2, Yvonne Pfeifer3, Armin Bauer2, Peter E Hammann2, Andreas Vilcinskas1,4.
Abstract
Background: The ability of MDR Gram-negative bacteria to evade even antibiotics of last resort is a severe global challenge. The development pipeline for conventional antibiotics cannot address this issue, but antimicrobial peptides (AMPs) offer an alternative solution.Entities:
Mesh:
Substances:
Year: 2019 PMID: 30272195 PMCID: PMC6322280 DOI: 10.1093/jac/dky386
Source DB: PubMed Journal: J Antimicrob Chemother ISSN: 0305-7453 Impact factor: 5.790
Properties of the synthetic L. sericata AMPs
| AMP | Sequence | Size | MW | p | Charge | G |
|---|---|---|---|---|---|---|
| LS-sarcotoxin | GWLKKIGKKIERVGQHTRDATIQTIGVAQQAANVAATLK-NH2 | 39 | 4199.86 | 11.63 | +6.1 | −0.321 |
| 39 | 4199.86 | 11.63 | +6.1 | −0.321 | ||
| LS-stomoxyn | GFRKRFNKLVKKVKHTIKETANVSKDVAIVAGSGVAVGAAM-NH2 | 41 | 4326.13 | 11.72 | +8.1 | 0.059 |
| 41 | 4326.13 | 11.72 | +8.1 | 0.059 |
‘all-d’ signifies l-amino acids were replaced by the corresponding d-amino acids.
The AMP properties molecular weight (MW), isoelectric point (pI) and net charge at pH 7 (Charge) were calculated using software provided at http://pepcalc.com/.
G, GRAVY score, total hydropathy values of all the amino acids divided by the size.
MIC values of LS-sarcotoxin against a panel of Gram-negative clinical isolates
| Species and resistance phenotype | MIC of LS-sarcotoxin (mg/L) | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| MIC50/90 (mg/L) | 2 | 4 | 8 | 16 | 32 | 64 | 128 | >128 | |
| 4/8 | 22 | 4 | |||||||
| CSTR MEMR (1) | 1 | ||||||||
| CSTR (9) | 8 | 1 | |||||||
| MEMR (4) | 3 | 1 | |||||||
| S (12) | 10 | 2 | |||||||
| 8/8 | 1 | 9 | 12 | 1 | |||||
| CSTR MEMR (1) | 1 | ||||||||
| CSTR (3) | 1 | 2 | |||||||
| MEMR (10) | 4 | 5 | 1 | ||||||
| S (9) | 5 | 4 | |||||||
| 1 | |||||||||
| CSTR MEMR (1) | 1 | ||||||||
| 4/8 | 12 | 8 | 1 | ||||||
| CSTR MEMR (6) | 4 | 2 | |||||||
| CSTR (9) | 4 | 4 | 1 | ||||||
| MEMR (2) | 2 | ||||||||
| S (4) | 2 | 2 | |||||||
| 2 | |||||||||
| MEMR (2) | 2 | ||||||||
| 4/8 | 5 | 5 | |||||||
| CSTR (2) | 1 | 1 | |||||||
| S (8) | 4 | 4 | |||||||
| 1 | |||||||||
| MEMR (1) | 1 | ||||||||
| 4/8 | 15 | 5 | |||||||
| CSTR MEMR (3) | 2 | 1 | |||||||
| MEMR (16) | 12 | 4 | |||||||
| S (1) | 1 | ||||||||
| 1 | |||||||||
| S (1) | 1 | ||||||||
| 2 | |||||||||
| MEMR (2) | 2 | ||||||||
| 1 | 1 | ||||||||
| CSTR MEMR (2) | 1 | 1 | |||||||
| 4 | |||||||||
| CSTR MEMR (1) | 1 | ||||||||
| CSTR (3) | 3 | ||||||||
| 1 | |||||||||
| CSTR MEMR (1) | 1 | ||||||||
CSTR, resistant to colistin; MEMR, resistant to meropenem; S, susceptible to colistin and meropenem.
The numbers of isolates for which the MIC value was determined are tabulated.
MIC values of LS-stomoxyn against a panel of Gram-negative clinical isolates
| Species and resistance phenotype | MIC of LS-stomoxyn (mg/L) | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| MIC50/90 (mg/L) | 2 | 4 | 8 | 16 | 32 | 64 | 128 | >128 | |
| 4/8 | 15 | 9 | 1 | 1 | |||||
| CSTR MEMR (1) | 1 | ||||||||
| CSTR (9) | 5 | 3 | 1 | ||||||
| MEMR (4) | 2 | 2 | |||||||
| S (12) | 7 | 4 | 1 | ||||||
| 4/8 | 1 | 14 | 6 | 2 | |||||
| CSTR MEMR (1) | 1 | ||||||||
| CSTR (3) | 1 | 1 | 1 | ||||||
| MEMR (10) | 6 | 3 | 1 | ||||||
| S (9) | 7 | 1 | 1 | ||||||
| 1 | |||||||||
| CSTR MEMR (1) | 1 | ||||||||
| 8/32 | 6 | 9 | 2 | 2 | 1 | 1 | |||
| CSTR MEMR (6) | 3 | 2 | 1 | ||||||
| CSTR (9) | 4 | 1 | 2 | 1 | 1 | ||||
| MEMR (2) | 2 | ||||||||
| S (4) | 1 | 3 | |||||||
| 2 | |||||||||
| MEMR (2) | 2 | ||||||||
| 4/8 | 6 | 4 | |||||||
| CSTR (2) | 2 | ||||||||
| S (8) | 4 | 4 | |||||||
| 1 | |||||||||
| MEMR (1) | 1 | ||||||||
| 4/8 | 10 | 9 | 1 | ||||||
| CSTR MEMR (3) | 1 | 2 | |||||||
| MEMR (16) | 9 | 6 | 1 | ||||||
| S (1) | 1 | ||||||||
| 1 | |||||||||
| S (1) | 1 | ||||||||
| 8/32 | 3 | 28 | 14 | 8 | 1 | ||||
| CSTR MEMR (1) | 1 | ||||||||
| MEMR (51) | 3 | 26 | 14 | 7 | 1 | ||||
| S (2) | 2 | ||||||||
| 1 | 1 | ||||||||
| CSTR MEMR (2) | 1 | 1 | |||||||
| 2 | 2 | ||||||||
| CSTR MEMR (1) | 1 | ||||||||
| CSTR (3) | 2 | 1 | |||||||
| 1 | |||||||||
| CSTR MEMR (1) | 1 | ||||||||
CSTR, resistant to colistin; MEMR, resistant to meropenem; S, susceptible to colistin and meropenem.
The numbers of isolates for which the MIC value was determined are tabulated.
Activity of all-d enantiomers of L. sericata AMPs compared with the native parental all-l enantiomers
| MIC (mg/L) | |||||
|---|---|---|---|---|---|
| Test strain | Phenotype | LS-sarcotoxin | LS-stomoxyn | ||
| S | 4 | 1024 | 4 | 16 | |
| MEMR | 4 | 128 | 4 | 16 | |
| S | 4 | >1024 | 4 | 16 | |
| MEMR | 4 | >1024 | 4 | 16 | |
| S | 4 | 256 | 4 | 64 | |
| MEMR | 4 | 128 | 4 | 32 | |
| S | 64 | >1024 | 8 | 32 | |
| MEMR | 128 | >1024 | 8 | 32 | |
| CSTR | 4 | >1024 | 4 | 16 | |
| CSTR | 16 | >1024 | 8 | 32 | |
MIC values were determined in CAMHB for the colistin/meropenem-susceptible (S) strains E. coli ATCC 25922, K. pneumoniae DSM 30104, A. baumannii ATCC 19606, P. aeruginosa ATCC 27853, the meropenem-resistant (MEMR) strains E. coli RKI 131/03, K. pneumoniae RKI 93/10, A. baumannii RKI 19/09, P. aeruginosa RKI 93/12, and the colistin-resistant (CSTR) strains E. coli RKI 6A-6 and K. pneumoniae RKI 19/16.
Enantiomer in which l-amino acids were replaced by the corresponding d-amino acids.
Relative increase in activity under different approximated physiological conditions
| Fold decrease in MIC compared with CAMHB | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| LS-sarcotoxin | LS-stomoxyn | ||||||||
| Test strain | Phenotype | N | C | S | S + N | N | C | S | S + N |
| S | 1 | 1 | 16 | 128 | 1 | 1 | 64 | 256 | |
| MEMR | 1 | 1 | 32 | 128 | 1 | 0.5 | 128 | 256 | |
| S | 1 | 1 | 32 | 32 | 0.5 | 0.5 | 128 | 256 | |
| MEMR | 0.5 | 1 | 8 | 32 | 0.5 | 0.5 | 64 | 256 | |
| S | 1 | 1 | 16 | 128 | 0.5 | 0.5 | 32 | 256 | |
| MEMR | 1 | 1 | 16 | 128 | 1 | 0.5 | 64 | 256 | |
| S | ND | ND | 0.5 | 0.25 | 0.5 | 0.5 | 4 | 4 | |
| MEMR | ND | ND | 0.25 | 0.25 | 1 | 0.5 | 0.5 | 0.5 | |
| CSTR | ND | ND | 16 | 32 | ND | ND | 32 | 64 | |
| CSTR | ND | ND | 8 | 16 | ND | ND | 16 | 64 | |
ND, not determined.
MICs were determined in CAMHB, CAMHB adjusted to 150 mM NaCl (N) or 1.25 mM CaCl2 (C), CAMHB supplemented with 10% human serum (S) and CAMHB supplemented with 10% human serum and adjusted to 150 mM NaCl (S + N). Fold changes in MIC values were calculated with respect to the MIC values obtained in CAMHB.
MIC values were determined for the colistin/meropenem-susceptible (S) strains E. coli ATCC 25922, K. pneumoniae DSM 30104, A. baumannii ATCC 19606, P. aeruginosa ATCC 27853, the meropenem-resistant (MEMR) strains E. coli RKI 131/03, K. pneumoniae RKI 93/10, A. baumannii RKI 19/09, P. aeruginosa RKI 93/12 and the colistin-resistant (CSTR) strains E. coli RKI 6A-6 and K. pneumoniae RKI 19/16.
Figure 1.Interaction of LS-sarcotoxin (LS-sarc.) and LS-stomoxyn (LS-stom.) with colistin tested on E. coli ATCC 25922 (a), A. baumannii ATCC 19606 (b) and P. aeruginosa ATCC 27853 (c). The data points of the isobolograms represent the concentrations of the two individual compounds in different combinations leading to complete bacterial growth inhibition. The calculated FICIs are displayed in (d). Values ≤0.5 indicate synergy.
Figure 2.Kill kinetics of LS-sarcotoxin (a) and LS-stomoxyn (b) against E. coli ATCC 25922 determined in CAMHB. The cfu/mL values are shown according to the incubation time for different peptide concentrations.
In vitro toxicity and metabolic stability of the L. sericata peptides
| AMP | MHC | NOEC | IC50 hERG | Eh | |
|---|---|---|---|---|---|
| LS-sarcotoxin | 1024 | 420 | >126 | 1060 | 13.9 |
| >1024 | 420 | ND | >5000 | <3 | |
| LS-stomoxyn | >1024 | 433 | >130 | 77 | 68.8 |
| >1024 | 433 | ND | 4110 | 3.9 |
ND, not determined.
Minimal haemolytic concentration determined for human erythrocytes.
Highest peptide concentration at which no cytotoxic effect (cell viability >80%) was observed for HepG2 cells.
Concentration at which the hERG channel was inhibited by 50%.
Half-life of AMPs determined in human cryopreserved hepatocytes.
Human extraction ratio: proportion of the compound that is eliminated by one passage through the liver.
Figure 3.Stability of LS-sarcotoxin (a), all-d LS-sarcotoxin (b), LS-stomoxyn (c) and all-d LS-stomoxyn (d) in plasma from different species. The extent of hydrolytic degradation is shown according to the incubation time in human, mouse and rat plasma.
Figure 4.Mean plasma levels (±SD) of LS-sarcotoxin (a) and LS-stomoxyn (b) after a single intravenous administration of 10 mg/kg to male Swiss mice. For LS-sarcotoxin and LS-stomoxyn, the LLOQ was determined as 1000 and 250 ng/mL, respectively.