Literature DB >> 3023959

Introduction of UAG, UAA, and UGA nonsense mutations at a specific site in the Escherichia coli chloramphenicol acetyltransferase gene: use in measurement of amber, ochre, and opal suppression in mammalian cells.

J P Capone, J M Sedivy, P A Sharp, U L RajBhandary.   

Abstract

We have used oligonucleotide-directed site-specific mutagenesis to convert serine codon 27 of the Escherichia coli chloramphenicol acetyltransferase (cat) gene to UAG, UAA, and UGA nonsense codons. The mutant cat genes, under transcriptional control of the Rous sarcoma virus long terminal repeat, were then introduced into mammalian cells by DNA transfection along with UAG, UAA, and UGA suppressor tRNA genes derived from a human serine tRNA. Assay for CAT enzymatic activity in extracts from such cells allowed us to detect and quantitate nonsense suppression in monkey CV-1 cells and mouse NIH3T3 cells. Using such an assay, we provide the first direct evidence that an opal suppressor tRNA gene is functional in mammalian cells. The pattern of suppression of the three cat nonsense mutations in bacteria suggests that the serine at position 27 of CAT can be replaced by a wide variety of amino acids without loss of enzymatic activity. Thus, these mutant cat genes should be generally useful for the quantitation of suppressor activity of suppressor tRNA genes introduced into cells and possibly for the detection of naturally occurring nonsense suppressors.

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Year:  1986        PMID: 3023959      PMCID: PMC367040          DOI: 10.1128/mcb.6.9.3059-3067.1986

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  33 in total

1.  Nucleotide sequence analysis of the chloramphenicol resistance transposon Tn9.

Authors:  N K Alton; D Vapnek
Journal:  Nature       Date:  1979 Dec 20-27       Impact factor: 49.962

2.  Primary structure of a chloramphenicol acetyltransferase specified by R plasmids.

Authors:  W V Shaw; L C Packman; B D Burleigh; A Dell; H R Morris; B S Hartley
Journal:  Nature       Date:  1979 Dec 20-27       Impact factor: 49.962

3.  Oligonucleotide-directed mutagenesis of DNA fragments cloned into M13 vectors.

Authors:  M J Zoller; M Smith
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

4.  A UGA termination suppression tRNATrp active in rabbit reticulocytes.

Authors:  A I Geller; A Rich
Journal:  Nature       Date:  1980-01-03       Impact factor: 49.962

5.  Construction of a vector, pRSVcatamb38, for the rapid and sensitive assay of amber suppression in human and other mammalian cells.

Authors:  J F Burke; A E Mogg
Journal:  Nucleic Acids Res       Date:  1985-02-25       Impact factor: 16.971

6.  The simian virus 40 minimal origin and the 72-base-pair repeat are required simultaneously for efficient induction of late gene expression with large tumor antigen.

Authors:  S W Hartzell; B J Byrne; K N Subramanian
Journal:  Proc Natl Acad Sci U S A       Date:  1984-10       Impact factor: 11.205

7.  Hybridization of synthetic oligodeoxyribonucleotides to phi chi 174 DNA: the effect of single base pair mismatch.

Authors:  R B Wallace; J Shaffer; R F Murphy; J Bonner; T Hirose; K Itakura
Journal:  Nucleic Acids Res       Date:  1979-08-10       Impact factor: 16.971

Review 8.  Chloramphenicol acetyltransferase: enzymology and molecular biology.

Authors:  W V Shaw
Journal:  CRC Crit Rev Biochem       Date:  1983

9.  An amber suppressor tRNA gene derived by site-specific mutagenesis: cloning and function in mammalian cells.

Authors:  F A Laski; R Belagaje; U L RajBhandary; P A Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  1982-10       Impact factor: 11.205

10.  Murine leukemia virus protease is encoded by the gag-pol gene and is synthesized through suppression of an amber termination codon.

Authors:  Y Yoshinaka; I Katoh; T D Copeland; S Oroszlan
Journal:  Proc Natl Acad Sci U S A       Date:  1985-03       Impact factor: 11.205

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  35 in total

1.  Translational nonsense codon suppression as indicator for functional pre-tRNA splicing in transformed Arabidopsis hypocotyl-derived calli.

Authors:  Kazuhito Akama; Hildburg Beier
Journal:  Nucleic Acids Res       Date:  2003-02-15       Impact factor: 16.971

2.  Evidence that a downstream pseudoknot is required for translational read-through of the Moloney murine leukemia virus gag stop codon.

Authors:  N M Wills; R F Gesteland; J F Atkins
Journal:  Proc Natl Acad Sci U S A       Date:  1991-08-15       Impact factor: 11.205

3.  Retroviral gag gene amber codon suppression is caused by an intrinsic cis-acting component of the viral mRNA.

Authors:  A T Panganiban
Journal:  J Virol       Date:  1988-10       Impact factor: 5.103

4.  Site-specific incorporation of an unnatural amino acid into proteins in mammalian cells.

Authors:  Kensaku Sakamoto; Akiko Hayashi; Ayako Sakamoto; Daisuke Kiga; Hiroshi Nakayama; Akiko Soma; Takatsugu Kobayashi; Makoto Kitabatake; Koji Takio; Kazuki Saito; Mikako Shirouzu; Ichiro Hirao; Shigeyuki Yokoyama
Journal:  Nucleic Acids Res       Date:  2002-11-01       Impact factor: 16.971

5.  Import of amber and ochre suppressor tRNAs into mammalian cells: a general approach to site-specific insertion of amino acid analogues into proteins.

Authors:  C Köhrer; L Xie; S Kellerer; U Varshney; U L RajBhandary
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-20       Impact factor: 11.205

6.  Initiator-elongator discrimination in vertebrate tRNAs for protein synthesis.

Authors:  H J Drabkin; M Estrella; U L Rajbhandary
Journal:  Mol Cell Biol       Date:  1998-03       Impact factor: 4.272

7.  Efficient expression of small RNA polymerase III genes from a novel simian virus 40 vector and their effect on viral gene expression.

Authors:  R A Bhat; M R Furtado; B Thimmappaya
Journal:  Nucleic Acids Res       Date:  1989-02-11       Impact factor: 16.971

8.  Complete set of orthogonal 21st aminoacyl-tRNA synthetase-amber, ochre and opal suppressor tRNA pairs: concomitant suppression of three different termination codons in an mRNA in mammalian cells.

Authors:  Caroline Köhrer; Eric L Sullivan; Uttam L RajBhandary
Journal:  Nucleic Acids Res       Date:  2004-12-01       Impact factor: 16.971

9.  Nonsense suppression in archaea.

Authors:  Arpita Bhattacharya; Caroline Köhrer; Debabrata Mandal; Uttam L RajBhandary
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-27       Impact factor: 11.205

10.  The 5' flanking sequence negatively modulates the in vivo expression and in vitro transcription of a human tRNA gene.

Authors:  R I Tapping; D E Syroid; P T Bilan; J P Capone
Journal:  Nucleic Acids Res       Date:  1993-09-25       Impact factor: 16.971

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