Literature DB >> 30238312

The Ammonium Channel NOD26 is the Evolutionary Innovation that Drives the Emergence, Consolidation, and Dissemination of Nitrogen-Fixing Symbiosis in Angiosperms.

Romina Frare1,2, Nicolás Ayub1,2, Karina Alleva1,3, Gabriela Soto4,5.   

Abstract

Increasing evidence indicates that N-fixing symbiosis has evolved several times in the N-fixing clade of angiosperms and that this evolution is driven by a single evolutionary innovation. However, the genetics of this ancestral predisposition to N-fixing symbiosis remains unclear. A natural candidate for such molecular innovation is the ammonium channel NOD26, the main protein component of the symbiosome membrane, which facilitates the plant uptake of the nitrogen fixed by symbiotic bacteria. Here, in concordance with the emergence of N-fixing symbiosis in angiosperms but not in ancestral plants, phylogenetic analysis showed that NOD26 belongs to an angiosperm-exclusive subgroup of aquaporins. Integrated genomic, phylogenetic, and gene expression analyses supported NOD26 occurrence in the N-fixing clade, the increase in the NOD26 copy number by block and tandem duplications in legumes, and the low-copy number or even the loss of NOD26 in non-legume species of the N-fixing clade, which correlated with the possibility to lose N-fixing symbiosis in legume and non-legume lineages. Metabolic reconstructions showed that retention of NOD26 in N-fixing precursor could represent an adaptive mechanism to bypass energy crisis during anaerobic stress by ammonium detoxification. Finally, we discuss the potential use of NOD26 to transfer N-fixation to non-N-fixing crops as cereals.

Entities:  

Keywords:  Ammonium; Anaerobic; Channel; Evolution; Preadaptation; Symbiosis

Mesh:

Substances:

Year:  2018        PMID: 30238312     DOI: 10.1007/s00239-018-9867-3

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  38 in total

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Authors:  Jeff J Doyle
Journal:  Mol Plant Microbe Interact       Date:  2011-11       Impact factor: 4.171

2.  Symbiotic leghemoglobins are crucial for nitrogen fixation in legume root nodules but not for general plant growth and development.

Authors:  Thomas Ott; Joost T van Dongen; Catrin Günther; Lene Krusell; Guilhem Desbrosses; Helene Vigeolas; Vivien Bock; Tomasz Czechowski; Peter Geigenberger; Michael K Udvardi
Journal:  Curr Biol       Date:  2005-03-29       Impact factor: 10.834

Review 3.  Diversity and evolution of membrane intrinsic proteins.

Authors:  Federico Abascal; Iker Irisarri; Rafael Zardoya
Journal:  Biochim Biophys Acta       Date:  2013-12-16

Review 4.  Prediction of aquaporin function by integrating evolutionary and functional analyses.

Authors:  Juliana Perez Di Giorgio; Gabriela Soto; Karina Alleva; Cintia Jozefkowicz; Gabriela Amodeo; Jorge Prometeo Muschietti; Nicolás Daniel Ayub
Journal:  J Membr Biol       Date:  2013-11-29       Impact factor: 1.843

5.  The arginine-facing amino acid residue of the rat aquaporin 1 constriction determines solute selectivity according to its size and lipophilicity.

Authors:  Dawid Krenc; Jie Song; Abdulnasser Almasalmeh; Binghua Wu; Eric Beitz
Journal:  Mol Membr Biol       Date:  2014-10-24       Impact factor: 2.857

6.  FixJ: a major regulator of the oxygen limitation response and late symbiotic functions of Sinorhizobium meliloti.

Authors:  Christine Bobik; Eliane Meilhoc; Jacques Batut
Journal:  J Bacteriol       Date:  2006-07       Impact factor: 3.490

Review 7.  How rhizobial symbionts invade plants: the Sinorhizobium-Medicago model.

Authors:  Kathryn M Jones; Hajime Kobayashi; Bryan W Davies; Michiko E Taga; Graham C Walker
Journal:  Nat Rev Microbiol       Date:  2007-08       Impact factor: 60.633

Review 8.  pH regulation in anoxic plants.

Authors:  Hubert H Felle
Journal:  Ann Bot       Date:  2005-07-15       Impact factor: 4.357

9.  Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.

Authors:  Matthew Kearse; Richard Moir; Amy Wilson; Steven Stones-Havas; Matthew Cheung; Shane Sturrock; Simon Buxton; Alex Cooper; Sidney Markowitz; Chris Duran; Tobias Thierer; Bruce Ashton; Peter Meintjes; Alexei Drummond
Journal:  Bioinformatics       Date:  2012-04-27       Impact factor: 6.937

10.  Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data.

Authors:  Ratan Chopra; Gloria Burow; Andrew Farmer; Joann Mudge; Charles E Simpson; Mark D Burow
Journal:  PLoS One       Date:  2014-12-31       Impact factor: 3.240

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  2 in total

1.  Physiological and transcriptomic response of Medicago truncatula to colonization by high- or low-benefit arbuscular mycorrhizal fungi.

Authors:  Kevin R Cope; Arjun Kafle; Jaya K Yakha; Philip E Pfeffer; Gary D Strahan; Kevin Garcia; Senthil Subramanian; Heike Bücking
Journal:  Mycorrhiza       Date:  2022-05-05       Impact factor: 3.387

Review 2.  Gene Expression in Nitrogen-Fixing Symbiotic Nodule Cells in Medicago truncatula and Other Nodulating Plants.

Authors:  Peter Mergaert; Attila Kereszt; Eva Kondorosi
Journal:  Plant Cell       Date:  2019-11-11       Impact factor: 11.277

  2 in total

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